RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 KIF14Q15058 1648 aa9.65□□□□□ -0.87
TDP1-213ENST00000555880 PLB1Q6P1J6 1458 aa9.65□□□□□ -0.87
TDP1-213ENST00000555880 ANKRD30AQ9BXX3 1397 aa9.64□□□□□ -0.87
TDP1-213ENST00000555880 PZPP20742 1482 aa9.64□□□□□ -0.87
TDP1-213ENST00000555880 KIAA1107Q9UPP5 1409 aa9.63□□□□□ -0.87
TDP1-213ENST00000555880 ZNF777Q9ULD5 760 aaPredicted RBP9.62□□□□□ -0.87
TDP1-213ENST00000555880 FARP1Q9Y4F1 1045 aaPredicted RBP9.62□□□□□ -0.87
TDP1-213ENST00000555880 NBPF8Q3BBV2 869 aa9.62□□□□□ -0.87
TDP1-213ENST00000555880 PRKRIP1Q9H875 184 aaPredicted RBP9.62□□□□□ -0.87
TDP1-213ENST00000555880 SPATA31E1Q6ZUB1 1445 aa9.61□□□□□ -0.87
TDP1-213ENST00000555880 SHANK2Q9UPX8 1470 aa9.61□□□□□ -0.87
TDP1-213ENST00000555880 CDC42BPAQ5VT25 1732 aa9.61□□□□□ -0.87
TDP1-213ENST00000555880 STAG3Q9UJ98 1225 aa9.61□□□□□ -0.87
TDP1-213ENST00000555880 PLEKHD1A6NEE1 506 aa9.6□□□□□ -0.87
TDP1-213ENST00000555880 MRS2Q9HD23 443 aa9.6□□□□□ -0.87
TDP1-213ENST00000555880 KIF7Q2M1P5 1343 aa9.6□□□□□ -0.87
TDP1-213ENST00000555880 MBD5Q9P267 1494 aa9.6□□□□□ -0.87
TDP1-213ENST00000555880 ABCA8O94911 1581 aa9.59□□□□□ -0.87
TDP1-213ENST00000555880 PTPRGP23470 1445 aa9.59□□□□□ -0.87
TDP1-213ENST00000555880 ERICH6BQ5W0A0 696 aa9.59□□□□□ -0.87
TDP1-213ENST00000555880 ANKRD50Q9ULJ7 1429 aa9.59□□□□□ -0.87
TDP1-213ENST00000555880 C11orf95C9JLR9 678 aaPredicted RBP9.59□□□□□ -0.87
TDP1-213ENST00000555880 CREBZFQ9NS37 354 aa9.59□□□□□ -0.87
TDP1-213ENST00000555880 C9orf84Q5VXU9 1444 aa9.58□□□□□ -0.88
TDP1-213ENST00000555880 PKD2Q13563 968 aa9.58□□□□□ -0.88
TDP1-213ENST00000555880 FAM9BQ8IZU0 186 aa9.57□□□□□ -0.88
TDP1-213ENST00000555880 ARID4BQ4LE39 1312 aaPredicted RBP9.57□□□□□ -0.88
TDP1-213ENST00000555880 ZBED9Q6R2W3 1325 aa9.57□□□□□ -0.88
TDP1-213ENST00000555880 USP47Q96K76 1375 aa9.57□□□□□ -0.88
TDP1-213ENST00000555880 ARHGEF12Q9NZN5 1544 aa9.57□□□□□ -0.88
TDP1-213ENST00000555880 ZNF326Q5BKZ1 582 aaKnown RBP9.57□□□□□ -0.88
TDP1-213ENST00000555880 ABCC10Q5T3U5 1492 aa9.56□□□□□ -0.88
TDP1-213ENST00000555880 TSPY4P0CV99 314 aa9.56□□□□□ -0.88
TDP1-213ENST00000555880 TSPY10P0CW01 314 aa9.56□□□□□ -0.88
TDP1-213ENST00000555880 NUP155O75694 1391 aa9.56□□□□□ -0.88
TDP1-213ENST00000555880 KDM5DQ9BY66 1539 aa9.56□□□□□ -0.88
TDP1-213ENST00000555880 KDM5CP41229 1560 aa9.56□□□□□ -0.88
TDP1-213ENST00000555880 ARHGEF5Q12774 1597 aa9.56□□□□□ -0.88
TDP1-213ENST00000555880 CD44P16070 742 aaKnown RBP9.55□□□□□ -0.88
TDP1-213ENST00000555880 ANP32EQ9BTT0 268 aa9.55□□□□□ -0.88
TDP1-213ENST00000555880 ATP10BO94823 1461 aa9.55□□□□□ -0.88
TDP1-213ENST00000555880 CCDC184Q52MB2 194 aa9.55□□□□□ -0.88
TDP1-213ENST00000555880 RBM19Q9Y4C8 960 aaKnown RBP9.55□□□□□ -0.88
TDP1-213ENST00000555880 ROCK2O75116 1388 aaKnown RBP9.55□□□□□ -0.88
TDP1-213ENST00000555880 RALGAPBQ86X10 1494 aa9.55□□□□□ -0.88
TDP1-213ENST00000555880 UHRF1BP1Q6BDS2 1440 aa9.54□□□□□ -0.88
TDP1-213ENST00000555880 CHD1O14646 1710 aa9.54□□□□□ -0.88
TDP1-213ENST00000555880 BCORL1Q5H9F3 1711 aa9.53□□□□□ -0.88
TDP1-213ENST00000555880 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
TDP1-213ENST00000555880 PROM2Q8N271 834 aa9.53□□□□□ -0.88
TDP1-213ENST00000555880 PPP4R2Q9NY27 417 aa9.53□□□□□ -0.88
TDP1-213ENST00000555880 GABBR2O75899 941 aa9.53□□□□□ -0.88
TDP1-213ENST00000555880 IRX6P78412 446 aaPredicted RBP9.53□□□□□ -0.88
TDP1-213ENST00000555880 POLR3GLQ9BT43 218 aa9.53□□□□□ -0.88
TDP1-213ENST00000555880 PREX2Q70Z35 1606 aa9.52□□□□□ -0.89
TDP1-213ENST00000555880 CCDC141Q6ZP82 1450 aa9.52□□□□□ -0.89
TDP1-213ENST00000555880 DHX29Q7Z478 1369 aaKnown RBP9.51□□□□□ -0.89
TDP1-213ENST00000555880 CARD11Q9BXL7 1154 aa9.51□□□□□ -0.89
TDP1-213ENST00000555880 RSPH4AQ5TD94 716 aa9.5□□□□□ -0.89
TDP1-213ENST00000555880 CDC42BPBQ9Y5S2 1711 aa9.49□□□□□ -0.89
TDP1-213ENST00000555880 SAMD9LQ8IVG5 1584 aa9.49□□□□□ -0.89
TDP1-213ENST00000555880 HNRNPMP52272 730 aaKnown RBP eCLIP9.49□□□□□ -0.89
TDP1-213ENST00000555880 KTN1Q86UP2 1357 aaKnown RBP9.48□□□□□ -0.89
TDP1-213ENST00000555880 FAM135AQ9P2D6 1515 aa9.48□□□□□ -0.89
TDP1-213ENST00000555880 SHROOM2Q13796 1616 aa9.48□□□□□ -0.89
TDP1-213ENST00000555880 SMG6Q86US8 1419 aaKnown RBP9.48□□□□□ -0.89
TDP1-213ENST00000555880 DCAF11Q8TEB1 546 aa9.47□□□□□ -0.89
TDP1-213ENST00000555880 CCDC144AA2RUR9 1427 aa9.47□□□□□ -0.89
TDP1-213ENST00000555880 CNGB1Q14028 1251 aaPredicted RBP9.47□□□□□ -0.89
TDP1-213ENST00000555880 TMC1Q8TDI8 760 aa9.47□□□□□ -0.89
TDP1-213ENST00000555880 KDM2AQ9Y2K7 1162 aa9.47□□□□□ -0.89
TDP1-213ENST00000555880 MAST1Q9Y2H9 1570 aa9.46□□□□□ -0.89
TDP1-213ENST00000555880 ARHGAP5Q13017 1502 aa9.46□□□□□ -0.9
TDP1-213ENST00000555880 CLASP1Q7Z460 1538 aa9.46□□□□□ -0.9
TDP1-213ENST00000555880 MYO5CQ9NQX4 1742 aa9.46□□□□□ -0.9
TDP1-213ENST00000555880 UNC13BO14795 1591 aa9.46□□□□□ -0.9
TDP1-213ENST00000555880 SYCP2Q9BX26 1530 aa9.45□□□□□ -0.9
TDP1-213ENST00000555880 PLEKHH2Q8IVE3 1493 aa9.45□□□□□ -0.9
TDP1-213ENST00000555880 E9PCH4 1651 aa9.45□□□□□ -0.9
TDP1-213ENST00000555880 FANCIQ9NVI1 1328 aa9.45□□□□□ -0.9
TDP1-213ENST00000555880 MNX1P50219 401 aaPredicted RBP9.45□□□□□ -0.9
TDP1-213ENST00000555880 NUDCQ9Y266 331 aa9.45□□□□□ -0.9
TDP1-213ENST00000555880 TRPM1Q7Z4N2 1603 aa9.44□□□□□ -0.9
TDP1-213ENST00000555880 PLXNC1O60486 1568 aa9.44□□□□□ -0.9
TDP1-213ENST00000555880 TTC37Q6PGP7 1564 aa9.44□□□□□ -0.9
TDP1-213ENST00000555880 ST20-MTHFSA0A0A6YYL1 179 aa9.44□□□□□ -0.9
TDP1-213ENST00000555880 RALBP1Q15311 655 aa9.44□□□□□ -0.9
TDP1-213ENST00000555880 ABCC2Q92887 1545 aa9.44□□□□□ -0.9
TDP1-213ENST00000555880 BRD4O60885 1362 aaPredicted RBP9.43□□□□□ -0.9
TDP1-213ENST00000555880 ZRANB1Q9UGI0 708 aa9.43□□□□□ -0.9
TDP1-213ENST00000555880 MYBBP1AQ9BQG0 1328 aaKnown RBP9.43□□□□□ -0.9
TDP1-213ENST00000555880 IQGAP3Q86VI3 1631 aa9.43□□□□□ -0.9
TDP1-213ENST00000555880 EIF2AK4Q9P2K8 1649 aaKnown RBP9.43□□□□□ -0.9
TDP1-213ENST00000555880 ERICH6Q7L0X2 663 aa9.42□□□□□ -0.9
TDP1-213ENST00000555880 PNISRQ8TF01 805 aaKnown RBP9.42□□□□□ -0.9
TDP1-213ENST00000555880 PRAG1Q86YV5 1406 aa9.42□□□□□ -0.9
TDP1-213ENST00000555880 LAMC1P11047 1609 aa9.42□□□□□ -0.9
TDP1-213ENST00000555880 ERCC6L2Q5T890 1561 aa9.42□□□□□ -0.9
TDP1-213ENST00000555880 B4GALNT3Q6L9W6 998 aa9.42□□□□□ -0.9
TDP1-213ENST00000555880 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 153.4 ms