RNA–Protein interactions for RNA: ENST00000555830.1

SDR39U1-215, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 418 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-215ENST00000555830 KDM5DQ9BY66 1539 aa24.1■■□□□ 1.45
SDR39U1-215ENST00000555830 ZMYM3Q14202 1370 aa24.09■■□□□ 1.45
SDR39U1-215ENST00000555830 RRP7BPQ9NSQ0 103 aa24.09■■□□□ 1.45
SDR39U1-215ENST00000555830 PPP6R1Q9UPN7 881 aa24.09■■□□□ 1.45
SDR39U1-215ENST00000555830 ANKRD30AQ9BXX3 1397 aa24.08■■□□□ 1.45
SDR39U1-215ENST00000555830 RNF17Q9BXT8 1623 aaKnown RBP24.07■■□□□ 1.44
SDR39U1-215ENST00000555830 HSPA2P54652 639 aa24.07■■□□□ 1.44
SDR39U1-215ENST00000555830 FAM135AQ9P2D6 1515 aa24.06■■□□□ 1.44
SDR39U1-215ENST00000555830 WASHC2CQ9Y4E1 1318 aa24.06■■□□□ 1.44
SDR39U1-215ENST00000555830 ERBINQ96RT1 1412 aa24.03■■□□□ 1.44
SDR39U1-215ENST00000555830 ZC3H13Q5T200 1668 aaKnown RBP24.03■■□□□ 1.44
SDR39U1-215ENST00000555830 NPATQ14207 1427 aa24.02■■□□□ 1.44
SDR39U1-215ENST00000555830 CEP152O94986 1710 aa24.01■■□□□ 1.43
SDR39U1-215ENST00000555830 MYO3AQ8NEV4 1616 aa23.99■■□□□ 1.43
SDR39U1-215ENST00000555830 ITGAEP38570 1179 aa23.99■■□□□ 1.43
SDR39U1-215ENST00000555830 ADGRL2O95490 1459 aa23.98■■□□□ 1.43
SDR39U1-215ENST00000555830 PTPRKQ15262 1439 aa23.97■■□□□ 1.43
SDR39U1-215ENST00000555830 ABCC3O15438 1527 aa23.96■■□□□ 1.43
SDR39U1-215ENST00000555830 NCOA1Q15788 1441 aa23.96■■□□□ 1.43
SDR39U1-215ENST00000555830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.96■■□□□ 1.43
SDR39U1-215ENST00000555830 MROH1Q8NDA8 1641 aa23.95■■□□□ 1.43
SDR39U1-215ENST00000555830 PZPP20742 1482 aa23.94■■□□□ 1.42
SDR39U1-215ENST00000555830 KANK1Q14678 1352 aa23.94■■□□□ 1.42
SDR39U1-215ENST00000555830 CAMSAP1Q5T5Y3 1602 aa23.94■■□□□ 1.42
SDR39U1-215ENST00000555830 PRDM15P57071 1507 aaPredicted RBP23.94■■□□□ 1.42
SDR39U1-215ENST00000555830 ZNF142P52746 1687 aaPredicted RBP23.92■■□□□ 1.42
SDR39U1-215ENST00000555830 DEPDC5O75140 1603 aa23.92■■□□□ 1.42
SDR39U1-215ENST00000555830 CEP170BQ9Y4F5 1589 aaPredicted RBP23.91■■□□□ 1.42
SDR39U1-215ENST00000555830 TNRQ92752 1358 aa23.91■■□□□ 1.42
SDR39U1-215ENST00000555830 CFAP65Q6ZU64 1925 aaKnown RBP23.9■■□□□ 1.42
SDR39U1-215ENST00000555830 ILDR1Q86SU0 546 aaPredicted RBP23.89■■□□□ 1.41
SDR39U1-215ENST00000555830 ANKRD50Q9ULJ7 1429 aa23.88■■□□□ 1.41
SDR39U1-215ENST00000555830 FBXO31Q5XUX0 539 aaPredicted RBP23.88■■□□□ 1.41
SDR39U1-215ENST00000555830 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.88■■□□□ 1.41
SDR39U1-215ENST00000555830 RRBP1Q9P2E9 1410 aaKnown RBP23.84■■□□□ 1.41
SDR39U1-215ENST00000555830 STRCQ7RTU9 1775 aa23.84■■□□□ 1.41
SDR39U1-215ENST00000555830 ROCK1Q13464 1354 aa23.84■■□□□ 1.41
SDR39U1-215ENST00000555830 A2ML1A8K2U0 1454 aa23.83■■□□□ 1.41
SDR39U1-215ENST00000555830 DMRT2Q9Y5R5 561 aa23.81■■□□□ 1.4
SDR39U1-215ENST00000555830 ERVK-7P63135 1459 aa23.81■■□□□ 1.4
SDR39U1-215ENST00000555830 SPATA31D1Q6ZQQ2 1576 aa23.79■■□□□ 1.4
SDR39U1-215ENST00000555830 NLRP1Q9C000 1473 aa23.79■■□□□ 1.4
SDR39U1-215ENST00000555830 UNC13BO14795 1591 aa23.77■■□□□ 1.4
SDR39U1-215ENST00000555830 VWDEQ8N2E2 1590 aa23.76■■□□□ 1.39
SDR39U1-215ENST00000555830 LMTK2Q8IWU2 1503 aa23.75■■□□□ 1.39
SDR39U1-215ENST00000555830 ARHGAP31Q2M1Z3 1444 aa23.75■■□□□ 1.39
SDR39U1-215ENST00000555830 PLA2R1Q13018 1463 aa23.75■■□□□ 1.39
SDR39U1-215ENST00000555830 EFCAB6Q5THR3 1501 aa23.74■■□□□ 1.39
SDR39U1-215ENST00000555830 UGGT1Q9NYU2 1555 aa23.74■■□□□ 1.39
SDR39U1-215ENST00000555830 POLR1AO95602 1720 aaPredicted RBP23.73■■□□□ 1.39
SDR39U1-215ENST00000555830 TET3O43151 1660 aa23.73■■□□□ 1.39
SDR39U1-215ENST00000555830 NCKAP5LQ9HCH0 1330 aa23.72■■□□□ 1.39
SDR39U1-215ENST00000555830 GCC2Q8IWJ2 1684 aa23.72■■□□□ 1.39
SDR39U1-215ENST00000555830 PTPRTO14522 1441 aa23.69■■□□□ 1.38
SDR39U1-215ENST00000555830 THEMISQ8N1K5 641 aaPredicted RBP23.69■■□□□ 1.38
SDR39U1-215ENST00000555830 PKD2Q13563 968 aa23.68■■□□□ 1.38
SDR39U1-215ENST00000555830 IQGAP3Q86VI3 1631 aa23.67■■□□□ 1.38
SDR39U1-215ENST00000555830 STAG3Q9UJ98 1225 aa23.67■■□□□ 1.38
SDR39U1-215ENST00000555830 UBR1Q8IWV7 1749 aa23.66■■□□□ 1.38
SDR39U1-215ENST00000555830 NUP155O75694 1391 aa23.65■■□□□ 1.38
SDR39U1-215ENST00000555830 PIK3C2BO00750 1634 aa23.64■■□□□ 1.38
SDR39U1-215ENST00000555830 RPRD2Q5VT52 1461 aaKnown RBP23.63■■□□□ 1.37
SDR39U1-215ENST00000555830 ANKLE2Q86XL3 938 aa23.62■■□□□ 1.37
SDR39U1-215ENST00000555830 SYNMO15061 1565 aa23.61■■□□□ 1.37
SDR39U1-215ENST00000555830 E9PCH4 1651 aa23.61■■□□□ 1.37
SDR39U1-215ENST00000555830 NAIPQ13075 1403 aa23.6■■□□□ 1.37
SDR39U1-215ENST00000555830 NOS1P29475 1434 aa23.58■■□□□ 1.36
SDR39U1-215ENST00000555830 NEURL4Q96JN8 1562 aa23.57■■□□□ 1.36
SDR39U1-215ENST00000555830 FBXO41Q8TF61 875 aa23.57■■□□□ 1.36
SDR39U1-215ENST00000555830 HFM1A2PYH4 1435 aa23.57■■□□□ 1.36
SDR39U1-215ENST00000555830 TRIM52Q96A61 297 aa23.56■■□□□ 1.36
SDR39U1-215ENST00000555830 IQGAP1P46940 1657 aa23.55■■□□□ 1.36
SDR39U1-215ENST00000555830 CERKQ8TCT0 537 aa23.55■■□□□ 1.36
SDR39U1-215ENST00000555830 KDM5AP29375 1690 aaKnown RBP23.54■■□□□ 1.36
SDR39U1-215ENST00000555830 ADGRB3O60242 1522 aa23.54■■□□□ 1.36
SDR39U1-215ENST00000555830 NPHP4O75161 1426 aaPredicted RBP23.53■■□□□ 1.36
SDR39U1-215ENST00000555830 IDI1Q13907 227 aa23.53■■□□□ 1.36
SDR39U1-215ENST00000555830 EID1Q9Y6B2 187 aa23.53■■□□□ 1.36
SDR39U1-215ENST00000555830 SLC52A1Q9NWF4 448 aa23.52■■□□□ 1.36
SDR39U1-215ENST00000555830 SCAF11Q99590 1463 aaKnown RBP23.51■■□□□ 1.35
SDR39U1-215ENST00000555830 CHGAP10645 457 aaKnown RBP23.51■■□□□ 1.35
SDR39U1-215ENST00000555830 MYO5BQ9ULV0 1848 aa23.51■■□□□ 1.35
SDR39U1-215ENST00000555830 SPHKAPQ2M3C7 1700 aa23.5■■□□□ 1.35
SDR39U1-215ENST00000555830 ZNF335Q9H4Z2 1342 aaPredicted RBP23.5■■□□□ 1.35
SDR39U1-215ENST00000555830 SLIT1O75093 1534 aa23.49■■□□□ 1.35
SDR39U1-215ENST00000555830 TXNDC2Q86VQ3 553 aa23.48■■□□□ 1.35
SDR39U1-215ENST00000555830 MED14O60244 1454 aa23.47■■□□□ 1.35
SDR39U1-215ENST00000555830 LTBP4Q8N2S1 1624 aa23.46■■□□□ 1.35
SDR39U1-215ENST00000555830 ARHGAP23Q9P227 1491 aa23.46■■□□□ 1.35
SDR39U1-215ENST00000555830 TMEM2Q9UHN6 1383 aa23.46■■□□□ 1.35
SDR39U1-215ENST00000555830 BCANQ96GW7 911 aa23.43■■□□□ 1.34
SDR39U1-215ENST00000555830 TMEM131LA2VDJ0 1609 aa23.42■■□□□ 1.34
SDR39U1-215ENST00000555830 PPP1R15AO75807 674 aaPredicted RBP23.42■■□□□ 1.34
SDR39U1-215ENST00000555830 LTKP29376 864 aa23.41■■□□□ 1.34
SDR39U1-215ENST00000555830 SLC4A1APQ9BWU0 796 aaKnown RBP23.41■■□□□ 1.34
SDR39U1-215ENST00000555830 CPS1P31327 1500 aa23.38■■□□□ 1.33
SDR39U1-215ENST00000555830 RIMS2Q9UQ26 1411 aa23.37■■□□□ 1.33
SDR39U1-215ENST00000555830 HDGFP51858 240 aaKnown RBP23.37■■□□□ 1.33
SDR39U1-215ENST00000555830 SENP3Q9H4L4 574 aaPredicted RBP23.37■■□□□ 1.33
SDR39U1-215ENST00000555830 IQSEC2Q5JU85 1478 aa23.36■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms