RNA–Protein interactions for RNA: ENST00000555830.1

SDR39U1-215, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 418 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-215ENST00000555830 NISCHQ9Y2I1 1504 aa38.1■■■■□ 3.69
SDR39U1-215ENST00000555830 CCDC180Q9P1Z9 1646 aa34.02■■■■□ 3.04
SDR39U1-215ENST00000555830 ABCC9O60706 1549 aa33.42■■■□□ 2.94
SDR39U1-215ENST00000555830 RB1CC1Q8TDY2 1594 aa32.1■■■□□ 2.73
SDR39U1-215ENST00000555830 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
SDR39U1-215ENST00000555830 NACADO15069 1562 aa31.97■■■□□ 2.71
SDR39U1-215ENST00000555830 ZCCHC6Q5VYS8 1495 aaKnown RBP31.72■■■□□ 2.67
SDR39U1-215ENST00000555830 MYO15BQ96JP2 1530 aa31.64■■■□□ 2.66
SDR39U1-215ENST00000555830 DCAF1Q9Y4B6 1507 aa31.47■■■□□ 2.63
SDR39U1-215ENST00000555830 UNC13AQ9UPW8 1703 aa31.38■■■□□ 2.61
SDR39U1-215ENST00000555830 PABPN1Q86U42 306 aaKnown RBP eCLIP31.17■■■□□ 2.58
SDR39U1-215ENST00000555830 SCRIBQ14160 1630 aa31.09■■■□□ 2.57
SDR39U1-215ENST00000555830 BICRAQ9NZM4 1560 aa31.02■■■□□ 2.56
SDR39U1-215ENST00000555830 SHROOM4Q9ULL8 1493 aa30.7■■■□□ 2.51
SDR39U1-215ENST00000555830 DNAJC5BQ9UF47 199 aa30.61■■■□□ 2.49
SDR39U1-215ENST00000555830 EIF4G1Q04637 1599 aaKnown RBP30.28■■■□□ 2.44
SDR39U1-215ENST00000555830 CC2D2AQ9P2K1 1620 aa30.21■■■□□ 2.43
SDR39U1-215ENST00000555830 CECR2Q9BXF3 1484 aa30.01■■■□□ 2.4
SDR39U1-215ENST00000555830 SMARCA4P51532 1647 aa29.66■■■□□ 2.34
SDR39U1-215ENST00000555830 BAZ1AQ9NRL2 1556 aaPredicted RBP29.6■■■□□ 2.33
SDR39U1-215ENST00000555830 SMARCA2P51531 1590 aa29.49■■■□□ 2.31
SDR39U1-215ENST00000555830 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
SDR39U1-215ENST00000555830 NCAPD3P42695 1498 aa29.42■■■□□ 2.3
SDR39U1-215ENST00000555830 MROH2BQ7Z745 1585 aa29.38■■■□□ 2.29
SDR39U1-215ENST00000555830 HMGXB3Q12766 1538 aa29.35■■■□□ 2.29
SDR39U1-215ENST00000555830 BAZ1BQ9UIG0 1483 aaKnown RBP29.3■■■□□ 2.28
SDR39U1-215ENST00000555830 PEG3Q9GZU2 1588 aa29.27■■■□□ 2.28
SDR39U1-215ENST00000555830 WIZO95785 1651 aa29.12■■■□□ 2.25
SDR39U1-215ENST00000555830 RSF1Q96T23 1441 aaPredicted RBP28.95■■■□□ 2.23
SDR39U1-215ENST00000555830 ERCC6Q03468 1493 aa28.9■■■□□ 2.22
SDR39U1-215ENST00000555830 NESP48681 1621 aa28.84■■■□□ 2.21
SDR39U1-215ENST00000555830 LAMC3Q9Y6N6 1575 aa28.78■■■□□ 2.2
SDR39U1-215ENST00000555830 TOP2AP11388 1531 aaKnown RBP28.78■■■□□ 2.2
SDR39U1-215ENST00000555830 CADPSQ9ULU8 1353 aa28.6■■■□□ 2.17
SDR39U1-215ENST00000555830 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.17
SDR39U1-215ENST00000555830 PDS5BQ9NTI5 1447 aa28.58■■■□□ 2.17
SDR39U1-215ENST00000555830 CUX2O14529 1486 aa28.53■■■□□ 2.16
SDR39U1-215ENST00000555830 THOC2Q8NI27 1593 aaKnown RBP28.45■■■□□ 2.14
SDR39U1-215ENST00000555830 CCDC88BA6NC98 1476 aa28.39■■■□□ 2.13
SDR39U1-215ENST00000555830 CFTRP13569 1480 aa28.39■■■□□ 2.13
SDR39U1-215ENST00000555830 CEP164Q9UPV0 1460 aa28.35■■■□□ 2.13
SDR39U1-215ENST00000555830 PRDM2Q13029 1718 aa28.34■■■□□ 2.13
SDR39U1-215ENST00000555830 FANCD2Q9BXW9 1451 aa28.33■■■□□ 2.13
SDR39U1-215ENST00000555830 MRC2Q9UBG0 1479 aa28.31■■■□□ 2.12
SDR39U1-215ENST00000555830 SUPT5HO00267 1087 aaKnown RBP28.27■■■□□ 2.12
SDR39U1-215ENST00000555830 WDR62O43379 1518 aa28.18■■■□□ 2.1
SDR39U1-215ENST00000555830 DNAJC5Q9H3Z4 198 aa28.04■■■□□ 2.08
SDR39U1-215ENST00000555830 URB2Q14146 1524 aaKnown RBP28.02■■■□□ 2.08
SDR39U1-215ENST00000555830 TOPBP1Q92547 1522 aa27.85■■■□□ 2.05
SDR39U1-215ENST00000555830 ABCC8Q09428 1581 aa27.85■■■□□ 2.05
SDR39U1-215ENST00000555830 DNMBPQ6XZF7 1577 aa27.84■■■□□ 2.05
SDR39U1-215ENST00000555830 IFT140Q96RY7 1462 aa27.71■■■□□ 2.03
SDR39U1-215ENST00000555830 POLA1P09884 1462 aaPredicted RBP27.59■■■□□ 2.01
SDR39U1-215ENST00000555830 CUX1P39880 1505 aa27.58■■■□□ 2.01
SDR39U1-215ENST00000555830 ZNF608Q9ULD9 1512 aaPredicted RBP27.57■■■□□ 2
SDR39U1-215ENST00000555830 EIF4G3O43432 1585 aaKnown RBP27.55■■■□□ 2
SDR39U1-215ENST00000555830 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
SDR39U1-215ENST00000555830 FGD5Q6ZNL6 1462 aa27.54■■■□□ 2
SDR39U1-215ENST00000555830 SOGA1O94964 1423 aa27.49■■□□□ 1.99
SDR39U1-215ENST00000555830 RAD54L2Q9Y4B4 1467 aa27.48■■□□□ 1.99
SDR39U1-215ENST00000555830 AQRO60306 1485 aaKnown RBP eCLIP27.41■■□□□ 1.98
SDR39U1-215ENST00000555830 WRNQ14191 1432 aaPredicted RBP eCLIP27.38■■□□□ 1.97
SDR39U1-215ENST00000555830 BIVM-ERCC5R4GMW8 1640 aa27.35■■□□□ 1.97
SDR39U1-215ENST00000555830 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
SDR39U1-215ENST00000555830 WDR97A6NE52 1622 aa27.34■■□□□ 1.97
SDR39U1-215ENST00000555830 TOP2BQ02880 1626 aa27.34■■□□□ 1.97
SDR39U1-215ENST00000555830 SYNJ1O43426 1573 aa27.32■■□□□ 1.96
SDR39U1-215ENST00000555830 OSCARQ8IYS5 282 aa27.31■■□□□ 1.96
SDR39U1-215ENST00000555830 CHD1O14646 1710 aa27.27■■□□□ 1.96
SDR39U1-215ENST00000555830 PBRM1Q86U86 1689 aa27.24■■□□□ 1.95
SDR39U1-215ENST00000555830 FBLN2P98095 1184 aa27.23■■□□□ 1.95
SDR39U1-215ENST00000555830 ABCA10Q8WWZ4 1543 aa27.22■■□□□ 1.95
SDR39U1-215ENST00000555830 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
SDR39U1-215ENST00000555830 GRIN2BQ13224 1484 aa27.2■■□□□ 1.95
SDR39U1-215ENST00000555830 GAPVD1Q14C86 1478 aa27.19■■□□□ 1.94
SDR39U1-215ENST00000555830 ABCA5Q8WWZ7 1642 aa27.16■■□□□ 1.94
SDR39U1-215ENST00000555830 MAGI1Q96QZ7 1491 aaPredicted RBP27.14■■□□□ 1.94
SDR39U1-215ENST00000555830 CHMP7Q8WUX9 453 aaPredicted RBP27.07■■□□□ 1.92
SDR39U1-215ENST00000555830 SYNJ2O15056 1496 aa27.03■■□□□ 1.92
SDR39U1-215ENST00000555830 TRIM41Q8WV44 630 aa26.95■■□□□ 1.9
SDR39U1-215ENST00000555830 ADAMTS12P58397 1594 aa26.95■■□□□ 1.9
SDR39U1-215ENST00000555830 RIMBP3CA6NJZ7 1639 aa26.94■■□□□ 1.9
SDR39U1-215ENST00000555830 RIMBP3BA6NNM3 1639 aa26.94■■□□□ 1.9
SDR39U1-215ENST00000555830 RIMBP3Q9UFD9 1639 aa26.94■■□□□ 1.9
SDR39U1-215ENST00000555830 ERICH3Q5RHP9 1530 aa26.92■■□□□ 1.9
SDR39U1-215ENST00000555830 ARHGEF11O15085 1522 aa26.89■■□□□ 1.89
SDR39U1-215ENST00000555830 FHAD1B1AJZ9 1412 aa26.85■■□□□ 1.89
SDR39U1-215ENST00000555830 GRIN2AQ12879 1464 aa26.85■■□□□ 1.89
SDR39U1-215ENST00000555830 CLASP1Q7Z460 1538 aa26.85■■□□□ 1.89
SDR39U1-215ENST00000555830 KIF27Q86VH2 1401 aa26.83■■□□□ 1.89
SDR39U1-215ENST00000555830 CUL7Q14999 1698 aa26.73■■□□□ 1.87
SDR39U1-215ENST00000555830 CEP170Q5SW79 1584 aa26.72■■□□□ 1.87
SDR39U1-215ENST00000555830 NUP160Q12769 1436 aa26.67■■□□□ 1.86
SDR39U1-215ENST00000555830 CYB5RLQ6IPT4 315 aa26.65■■□□□ 1.86
SDR39U1-215ENST00000555830 ARAP1Q96P48 1450 aa26.65■■□□□ 1.86
SDR39U1-215ENST00000555830 IGF1RP08069 1367 aa26.62■■□□□ 1.85
SDR39U1-215ENST00000555830 RUSC2Q8N2Y8 1516 aa26.55■■□□□ 1.84
SDR39U1-215ENST00000555830 CARMIL1Q5VZK9 1371 aa26.54■■□□□ 1.84
SDR39U1-215ENST00000555830 SHROOM2Q13796 1616 aa26.52■■□□□ 1.84
SDR39U1-215ENST00000555830 ERCC6L2Q5T890 1561 aa26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms