RNA–Protein interactions for RNA: ENST00000552561.5

TMEM106C-220, Transcript of transmembrane protein 106C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM106C, Length 810 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-220ENST00000552561 TIAM1Q13009 1591 aa7.22□□□□□ -1.25
TMEM106C-220ENST00000552561 NCOA1Q15788 1441 aa7.22□□□□□ -1.25
TMEM106C-220ENST00000552561 MLECQ14165 292 aa7.22□□□□□ -1.25
TMEM106C-220ENST00000552561 PLSCR2Q9NRY7 297 aa7.22□□□□□ -1.25
TMEM106C-220ENST00000552561 A2MP01023 1474 aa7.22□□□□□ -1.25
TMEM106C-220ENST00000552561 PLA2R1Q13018 1463 aa7.22□□□□□ -1.25
TMEM106C-220ENST00000552561 ZNF142P52746 1687 aaPredicted RBP7.22□□□□□ -1.25
TMEM106C-220ENST00000552561 RSPH4AQ5TD94 716 aa7.21□□□□□ -1.26
TMEM106C-220ENST00000552561 ATP1B4Q9UN42 357 aaPredicted RBP7.21□□□□□ -1.26
TMEM106C-220ENST00000552561 ADGBQ8N7X0 1667 aa7.21□□□□□ -1.26
TMEM106C-220ENST00000552561 MAP3K1Q13233 1512 aa7.21□□□□□ -1.26
TMEM106C-220ENST00000552561 SUPT6HQ7KZ85 1726 aaKnown RBP7.21□□□□□ -1.26
TMEM106C-220ENST00000552561 TCOF1Q13428 1488 aaKnown RBP7.2□□□□□ -1.26
TMEM106C-220ENST00000552561 TOM1O60784 492 aa7.2□□□□□ -1.26
TMEM106C-220ENST00000552561 MYCNP04198 464 aaPredicted RBP7.2□□□□□ -1.26
TMEM106C-220ENST00000552561 CEBPAP49715 358 aaPredicted RBP7.2□□□□□ -1.26
TMEM106C-220ENST00000552561 ESF1Q9H501 851 aaKnown RBP7.2□□□□□ -1.26
TMEM106C-220ENST00000552561 SPAG9O60271 1321 aaKnown RBP7.2□□□□□ -1.26
TMEM106C-220ENST00000552561 ZMYM3Q14202 1370 aa7.2□□□□□ -1.26
TMEM106C-220ENST00000552561 CCNB3Q8WWL7 1395 aa7.2□□□□□ -1.26
TMEM106C-220ENST00000552561 PTPRKQ15262 1439 aa7.19□□□□□ -1.26
TMEM106C-220ENST00000552561 PIP4K2BP78356 416 aa7.19□□□□□ -1.26
TMEM106C-220ENST00000552561 CFDP1Q9UEE9 299 aaPredicted RBP7.19□□□□□ -1.26
TMEM106C-220ENST00000552561 MTUS2Q5JR59 1369 aa7.19□□□□□ -1.26
TMEM106C-220ENST00000552561 DHX29Q7Z478 1369 aaKnown RBP7.19□□□□□ -1.26
TMEM106C-220ENST00000552561 ARHGEF5Q12774 1597 aa7.18□□□□□ -1.26
TMEM106C-220ENST00000552561 HSPA1LP34931 641 aa7.18□□□□□ -1.26
TMEM106C-220ENST00000552561 CCDC141Q6ZP82 1450 aa7.17□□□□□ -1.26
TMEM106C-220ENST00000552561 HNRNPMP52272 730 aaKnown RBP eCLIP7.17□□□□□ -1.26
TMEM106C-220ENST00000552561 NCOA2Q15596 1464 aa7.17□□□□□ -1.26
TMEM106C-220ENST00000552561 MAST1Q9Y2H9 1570 aa7.16□□□□□ -1.26
TMEM106C-220ENST00000552561 MYO3AQ8NEV4 1616 aa7.16□□□□□ -1.26
TMEM106C-220ENST00000552561 RBM42Q9BTD8 480 aaKnown RBP7.16□□□□□ -1.26
TMEM106C-220ENST00000552561 CEP170BQ9Y4F5 1589 aaPredicted RBP7.16□□□□□ -1.26
TMEM106C-220ENST00000552561 CAMSAP1Q5T5Y3 1602 aa7.16□□□□□ -1.26
TMEM106C-220ENST00000552561 PKD2Q13563 968 aa7.15□□□□□ -1.26
TMEM106C-220ENST00000552561 VPS8Q8N3P4 1428 aa7.15□□□□□ -1.27
TMEM106C-220ENST00000552561 MIA2Q96PC5 1412 aa7.15□□□□□ -1.27
TMEM106C-220ENST00000552561 A2ML1A8K2U0 1454 aa7.15□□□□□ -1.27
TMEM106C-220ENST00000552561 PZPP20742 1482 aa7.15□□□□□ -1.27
TMEM106C-220ENST00000552561 CPS1P31327 1500 aa7.15□□□□□ -1.27
TMEM106C-220ENST00000552561 KDM5DQ9BY66 1539 aa7.15□□□□□ -1.27
TMEM106C-220ENST00000552561 CLTCQ00610 1675 aaKnown RBP7.15□□□□□ -1.27
TMEM106C-220ENST00000552561 CAMSAP2Q08AD1 1489 aa7.14□□□□□ -1.27
TMEM106C-220ENST00000552561 POLA2Q14181 598 aa7.14□□□□□ -1.27
TMEM106C-220ENST00000552561 LRRC9Q6ZRR7 1453 aa7.14□□□□□ -1.27
TMEM106C-220ENST00000552561 DNMT1P26358 1616 aaKnown RBP7.13□□□□□ -1.27
TMEM106C-220ENST00000552561 RNF17Q9BXT8 1623 aaKnown RBP7.13□□□□□ -1.27
TMEM106C-220ENST00000552561 EIF2AK4Q9P2K8 1649 aaKnown RBP7.13□□□□□ -1.27
TMEM106C-220ENST00000552561 MED14O60244 1454 aa7.13□□□□□ -1.27
TMEM106C-220ENST00000552561 ZNF335Q9H4Z2 1342 aaPredicted RBP7.13□□□□□ -1.27
TMEM106C-220ENST00000552561 ZNF644Q9H582 1327 aaPredicted RBP7.13□□□□□ -1.27
TMEM106C-220ENST00000552561 EHMT2Q96KQ7 1210 aa7.13□□□□□ -1.27
TMEM106C-220ENST00000552561 NLRP1Q9C000 1473 aa7.12□□□□□ -1.27
TMEM106C-220ENST00000552561 ZNF777Q9ULD5 760 aaPredicted RBP7.12□□□□□ -1.27
TMEM106C-220ENST00000552561 ZC3H13Q5T200 1668 aaKnown RBP7.12□□□□□ -1.27
TMEM106C-220ENST00000552561 SETD1AO15047 1707 aaKnown RBP7.11□□□□□ -1.27
TMEM106C-220ENST00000552561 MYT1LQ9UL68 1186 aa7.11□□□□□ -1.27
TMEM106C-220ENST00000552561 DEPDC5O75140 1603 aa7.11□□□□□ -1.27
TMEM106C-220ENST00000552561 NEURL4Q96JN8 1562 aa7.11□□□□□ -1.27
TMEM106C-220ENST00000552561 SHANK2Q9UPX8 1470 aa7.11□□□□□ -1.27
TMEM106C-220ENST00000552561 ARHGAP31Q2M1Z3 1444 aa7.1□□□□□ -1.27
TMEM106C-220ENST00000552561 MROH1Q8NDA8 1641 aa7.1□□□□□ -1.27
TMEM106C-220ENST00000552561 MYOM3Q5VTT5 1437 aa7.1□□□□□ -1.27
TMEM106C-220ENST00000552561 GGT6Q6P531 493 aa7.09□□□□□ -1.27
TMEM106C-220ENST00000552561 POLR1AO95602 1720 aaPredicted RBP7.09□□□□□ -1.27
TMEM106C-220ENST00000552561 TNRQ92752 1358 aa7.08□□□□□ -1.28
TMEM106C-220ENST00000552561 ABCC3O15438 1527 aa7.08□□□□□ -1.28
TMEM106C-220ENST00000552561 PRDM15P57071 1507 aaPredicted RBP7.08□□□□□ -1.28
TMEM106C-220ENST00000552561 DUOX2Q9NRD8 1548 aa7.08□□□□□ -1.28
TMEM106C-220ENST00000552561 TSPY4P0CV99 314 aa7.08□□□□□ -1.28
TMEM106C-220ENST00000552561 TSPY10P0CW01 314 aa7.08□□□□□ -1.28
TMEM106C-220ENST00000552561 LMTK2Q8IWU2 1503 aa7.07□□□□□ -1.28
TMEM106C-220ENST00000552561 KDM5AP29375 1690 aaKnown RBP7.07□□□□□ -1.28
TMEM106C-220ENST00000552561 ARHGAP23Q9P227 1491 aa7.07□□□□□ -1.28
TMEM106C-220ENST00000552561 KIF3BO15066 747 aa7.07□□□□□ -1.28
TMEM106C-220ENST00000552561 ERBINQ96RT1 1412 aa7.07□□□□□ -1.28
TMEM106C-220ENST00000552561 VWDEQ8N2E2 1590 aa7.07□□□□□ -1.28
TMEM106C-220ENST00000552561 NCKAP5LQ9HCH0 1330 aa7.06□□□□□ -1.28
TMEM106C-220ENST00000552561 ERVK-7P63135 1459 aa7.06□□□□□ -1.28
TMEM106C-220ENST00000552561 THEMISQ8N1K5 641 aaPredicted RBP7.06□□□□□ -1.28
TMEM106C-220ENST00000552561 SLC4A1APQ9BWU0 796 aaKnown RBP7.06□□□□□ -1.28
TMEM106C-220ENST00000552561 UGGT1Q9NYU2 1555 aa7.06□□□□□ -1.28
TMEM106C-220ENST00000552561 SLIT1O75093 1534 aa7.06□□□□□ -1.28
TMEM106C-220ENST00000552561 WASHC2CQ9Y4E1 1318 aa7.05□□□□□ -1.28
TMEM106C-220ENST00000552561 SYNMO15061 1565 aa7.05□□□□□ -1.28
TMEM106C-220ENST00000552561 KANK4Q5T7N3 995 aaPredicted RBP7.05□□□□□ -1.28
TMEM106C-220ENST00000552561 FOXD4L1Q9NU39 408 aa7.05□□□□□ -1.28
TMEM106C-220ENST00000552561 CROCC2H7BZ55 1655 aa7.05□□□□□ -1.28
TMEM106C-220ENST00000552561 ALKQ9UM73 1620 aa7.05□□□□□ -1.28
TMEM106C-220ENST00000552561 SRCAPQ6ZRS2 3230 aa7.05□□□□□ -1.28
TMEM106C-220ENST00000552561 ABCC5O15440 1437 aa7.04□□□□□ -1.28
TMEM106C-220ENST00000552561 FBXO31Q5XUX0 539 aaPredicted RBP7.04□□□□□ -1.28
TMEM106C-220ENST00000552561 ANKLE2Q86XL3 938 aa7.04□□□□□ -1.28
TMEM106C-220ENST00000552561 ATF5Q9Y2D1 282 aaPredicted RBP7.04□□□□□ -1.28
TMEM106C-220ENST00000552561 ADGRL2O95490 1459 aa7.04□□□□□ -1.28
TMEM106C-220ENST00000552561 NPHP4O75161 1426 aaPredicted RBP7.03□□□□□ -1.28
TMEM106C-220ENST00000552561 UBR1Q8IWV7 1749 aa7.03□□□□□ -1.28
TMEM106C-220ENST00000552561 IQGAP1P46940 1657 aa7.03□□□□□ -1.28
TMEM106C-220ENST00000552561 FGD6Q6ZV73 1430 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms