RNA–Protein interactions for RNA: ENST00000551261.5

LETMD1-229, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 521 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-229ENST00000551261 NUP155O75694 1391 aa20.73■□□□□ 0.91
LETMD1-229ENST00000551261 ABCA6Q8N139 1617 aa20.73■□□□□ 0.91
LETMD1-229ENST00000551261 REREQ9P2R6 1566 aa20.72■□□□□ 0.91
LETMD1-229ENST00000551261 DIP2CQ9Y2E4 1556 aa20.72■□□□□ 0.91
LETMD1-229ENST00000551261 RNF17Q9BXT8 1623 aaKnown RBP20.72■□□□□ 0.91
LETMD1-229ENST00000551261 SLC4A1APQ9BWU0 796 aaKnown RBP20.72■□□□□ 0.91
LETMD1-229ENST00000551261 MYT1LQ9UL68 1186 aa20.69■□□□□ 0.9
LETMD1-229ENST00000551261 KANK1Q14678 1352 aa20.69■□□□□ 0.9
LETMD1-229ENST00000551261 VWDEQ8N2E2 1590 aa20.68■□□□□ 0.9
LETMD1-229ENST00000551261 ANKRD30BQ9BXX2 1392 aa20.65■□□□□ 0.9
LETMD1-229ENST00000551261 TET3O43151 1660 aa20.64■□□□□ 0.9
LETMD1-229ENST00000551261 LMTK2Q8IWU2 1503 aa20.64■□□□□ 0.9
LETMD1-229ENST00000551261 ARHGEF40Q8TER5 1519 aa20.64■□□□□ 0.9
LETMD1-229ENST00000551261 RAPGEF3O95398 923 aa20.64■□□□□ 0.89
LETMD1-229ENST00000551261 MROH1Q8NDA8 1641 aa20.64■□□□□ 0.89
LETMD1-229ENST00000551261 RPRD2Q5VT52 1461 aaKnown RBP20.62■□□□□ 0.89
LETMD1-229ENST00000551261 AGLP35573 1532 aa20.62■□□□□ 0.89
LETMD1-229ENST00000551261 ATP10AO60312 1499 aa20.62■□□□□ 0.89
LETMD1-229ENST00000551261 ZC3H13Q5T200 1668 aaKnown RBP20.61■□□□□ 0.89
LETMD1-229ENST00000551261 TONSLQ96HA7 1378 aa20.6■□□□□ 0.89
LETMD1-229ENST00000551261 PKD2Q13563 968 aa20.59■□□□□ 0.89
LETMD1-229ENST00000551261 YEATS2Q9ULM3 1422 aa20.57■□□□□ 0.88
LETMD1-229ENST00000551261 KIF3BO15066 747 aa20.56■□□□□ 0.88
LETMD1-229ENST00000551261 EFCAB6Q5THR3 1501 aa20.56■□□□□ 0.88
LETMD1-229ENST00000551261 COL17A1Q9UMD9 1497 aaPredicted RBP20.52■□□□□ 0.88
LETMD1-229ENST00000551261 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.52■□□□□ 0.88
LETMD1-229ENST00000551261 TRPM2O94759 1503 aa20.52■□□□□ 0.87
LETMD1-229ENST00000551261 E9PCH4 1651 aa20.51■□□□□ 0.87
LETMD1-229ENST00000551261 SIN3AQ96ST3 1273 aa20.51■□□□□ 0.87
LETMD1-229ENST00000551261 PPP6R1Q9UPN7 881 aa20.51■□□□□ 0.87
LETMD1-229ENST00000551261 CCDC144AA2RUR9 1427 aa20.51■□□□□ 0.87
LETMD1-229ENST00000551261 NEUROD1Q13562 356 aa20.5■□□□□ 0.87
LETMD1-229ENST00000551261 ABCC3O15438 1527 aa20.49■□□□□ 0.87
LETMD1-229ENST00000551261 TRHP20396 242 aaPredicted RBP20.49■□□□□ 0.87
LETMD1-229ENST00000551261 SPHKAPQ2M3C7 1700 aa20.49■□□□□ 0.87
LETMD1-229ENST00000551261 NEURL4Q96JN8 1562 aa20.48■□□□□ 0.87
LETMD1-229ENST00000551261 PTPRTO14522 1441 aa20.48■□□□□ 0.87
LETMD1-229ENST00000551261 ARHGAP31Q2M1Z3 1444 aa20.47■□□□□ 0.87
LETMD1-229ENST00000551261 CEP152O94986 1710 aa20.47■□□□□ 0.87
LETMD1-229ENST00000551261 CAMSAP1Q5T5Y3 1602 aa20.46■□□□□ 0.87
LETMD1-229ENST00000551261 FOXD1Q16676 465 aa20.45■□□□□ 0.86
LETMD1-229ENST00000551261 PLA2R1Q13018 1463 aa20.43■□□□□ 0.86
LETMD1-229ENST00000551261 PPP1R15AO75807 674 aaPredicted RBP20.42■□□□□ 0.86
LETMD1-229ENST00000551261 CNTLNQ9NXG0 1405 aa20.42■□□□□ 0.86
LETMD1-229ENST00000551261 WASHC2CQ9Y4E1 1318 aa20.4■□□□□ 0.86
LETMD1-229ENST00000551261 GGT6Q6P531 493 aa20.39■□□□□ 0.85
LETMD1-229ENST00000551261 NPATQ14207 1427 aa20.38■□□□□ 0.85
LETMD1-229ENST00000551261 STAC3Q96MF2 364 aa20.35■□□□□ 0.85
LETMD1-229ENST00000551261 CLTCL1P53675 1640 aa20.35■□□□□ 0.85
LETMD1-229ENST00000551261 UHRF1BP1Q6BDS2 1440 aa20.34■□□□□ 0.85
LETMD1-229ENST00000551261 L3MBTL2Q969R5 705 aa20.33■□□□□ 0.85
LETMD1-229ENST00000551261 NOS1P29475 1434 aa20.33■□□□□ 0.84
LETMD1-229ENST00000551261 SIGLEC1Q9BZZ2 1709 aa20.32■□□□□ 0.84
LETMD1-229ENST00000551261 SPATA31E1Q6ZUB1 1445 aa20.31■□□□□ 0.84
LETMD1-229ENST00000551261 MROH2AA6NES4 1674 aa20.31■□□□□ 0.84
LETMD1-229ENST00000551261 KIF1BO60333 1816 aa20.3■□□□□ 0.84
LETMD1-229ENST00000551261 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
LETMD1-229ENST00000551261 PREX1Q8TCU6 1659 aa20.29■□□□□ 0.84
LETMD1-229ENST00000551261 CLTCQ00610 1675 aaKnown RBP20.28■□□□□ 0.84
LETMD1-229ENST00000551261 ZNF316A6NFI3 1004 aaPredicted RBP20.27■□□□□ 0.84
LETMD1-229ENST00000551261 ADGRB3O60242 1522 aa20.27■□□□□ 0.83
LETMD1-229ENST00000551261 SPATA31D1Q6ZQQ2 1576 aa20.25■□□□□ 0.83
LETMD1-229ENST00000551261 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
LETMD1-229ENST00000551261 ESF1Q9H501 851 aaKnown RBP20.24■□□□□ 0.83
LETMD1-229ENST00000551261 SYNMO15061 1565 aa20.24■□□□□ 0.83
LETMD1-229ENST00000551261 ERVK-7P63135 1459 aa20.24■□□□□ 0.83
LETMD1-229ENST00000551261 SLC52A1Q9NWF4 448 aa20.23■□□□□ 0.83
LETMD1-229ENST00000551261 MYOM2P54296 1465 aa20.23■□□□□ 0.83
LETMD1-229ENST00000551261 LAMC1P11047 1609 aa20.2■□□□□ 0.82
LETMD1-229ENST00000551261 PRAG1Q86YV5 1406 aa20.2■□□□□ 0.82
LETMD1-229ENST00000551261 ARID4BQ4LE39 1312 aaPredicted RBP20.2■□□□□ 0.82
LETMD1-229ENST00000551261 IFT172Q9UG01 1749 aa20.19■□□□□ 0.82
LETMD1-229ENST00000551261 UGGT1Q9NYU2 1555 aa20.18■□□□□ 0.82
LETMD1-229ENST00000551261 RPGRIP1LQ68CZ1 1315 aa20.18■□□□□ 0.82
LETMD1-229ENST00000551261 DCAF11Q8TEB1 546 aa20.17■□□□□ 0.82
LETMD1-229ENST00000551261 TRPM1Q7Z4N2 1603 aa20.16■□□□□ 0.82
LETMD1-229ENST00000551261 KIAA1210Q9ULL0 1709 aa20.16■□□□□ 0.82
LETMD1-229ENST00000551261 MADDQ8WXG6 1647 aa20.16■□□□□ 0.82
LETMD1-229ENST00000551261 KDM5AP29375 1690 aaKnown RBP20.16■□□□□ 0.82
LETMD1-229ENST00000551261 FER1L4A9Z1Z3 1794 aa20.16■□□□□ 0.82
LETMD1-229ENST00000551261 ZMYM3Q14202 1370 aa20.13■□□□□ 0.81
LETMD1-229ENST00000551261 GPRASP1Q5JY77 1395 aa20.13■□□□□ 0.81
LETMD1-229ENST00000551261 NRXN1Q9ULB1 1477 aa20.12■□□□□ 0.81
LETMD1-229ENST00000551261 NBPF8Q3BBV2 869 aa20.12■□□□□ 0.81
LETMD1-229ENST00000551261 PPLO60437 1756 aa20.12■□□□□ 0.81
LETMD1-229ENST00000551261 EIF4G2P78344 907 aaKnown RBP eCLIP20.11■□□□□ 0.81
LETMD1-229ENST00000551261 RGL3Q3MIN7 710 aa20.11■□□□□ 0.81
LETMD1-229ENST00000551261 TMEM131LA2VDJ0 1609 aa20.11■□□□□ 0.81
LETMD1-229ENST00000551261 MLECQ14165 292 aa20.1■□□□□ 0.81
LETMD1-229ENST00000551261 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
LETMD1-229ENST00000551261 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.81
LETMD1-229ENST00000551261 NLRP1Q9C000 1473 aa20.08■□□□□ 0.81
LETMD1-229ENST00000551261 ROCK2O75116 1388 aaKnown RBP20.08■□□□□ 0.8
LETMD1-229ENST00000551261 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
LETMD1-229ENST00000551261 TNRQ92752 1358 aa20.06■□□□□ 0.8
LETMD1-229ENST00000551261 ZNF326Q5BKZ1 582 aaKnown RBP20.05■□□□□ 0.8
LETMD1-229ENST00000551261 KDM2AQ9Y2K7 1162 aa20.05■□□□□ 0.8
LETMD1-229ENST00000551261 C3P01024 1663 aa20.05■□□□□ 0.8
LETMD1-229ENST00000551261 ADAMTSL3P82987 1691 aa20.04■□□□□ 0.8
LETMD1-229ENST00000551261 IDI1Q13907 227 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms