RNA–Protein interactions for RNA: ENST00000550224.5

PRIM1-205, Transcript of DNA primase subunit 1, humanhuman

TSL 5

Gene PRIM1, Length 1,206 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-205ENST00000550224 CUL7Q14999 1698 aa10.74□□□□□ -0.69
PRIM1-205ENST00000550224 ZNF316A6NFI3 1004 aaPredicted RBP10.73□□□□□ -0.69
PRIM1-205ENST00000550224 KHSRPQ92945 711 aaKnown RBP eCLIP10.73□□□□□ -0.69
PRIM1-205ENST00000550224 LSM11P83369 360 aaKnown RBP eCLIP10.72□□□□□ -0.69
PRIM1-205ENST00000550224 CLIP1P30622 1438 aa10.72□□□□□ -0.69
PRIM1-205ENST00000550224 GRIN2BQ13224 1484 aa10.72□□□□□ -0.69
PRIM1-205ENST00000550224 PPP1R37O75864 691 aa10.71□□□□□ -0.69
PRIM1-205ENST00000550224 TARBP1Q13395 1621 aaKnown RBP10.71□□□□□ -0.69
PRIM1-205ENST00000550224 FHAD1B1AJZ9 1412 aa10.69□□□□□ -0.7
PRIM1-205ENST00000550224 PLA2G2EQ9NZK7 142 aa10.69□□□□□ -0.7
PRIM1-205ENST00000550224 ABCA5Q8WWZ7 1642 aa10.69□□□□□ -0.7
PRIM1-205ENST00000550224 THOC2Q8NI27 1593 aaKnown RBP10.68□□□□□ -0.7
PRIM1-205ENST00000550224 TRIM26Q12899 539 aaPredicted RBP10.66□□□□□ -0.7
PRIM1-205ENST00000550224 AQRO60306 1485 aaKnown RBP eCLIP10.66□□□□□ -0.7
PRIM1-205ENST00000550224 CHMP7Q8WUX9 453 aaPredicted RBP10.65□□□□□ -0.7
PRIM1-205ENST00000550224 RANGAP1P46060 587 aaPredicted RBP10.64□□□□□ -0.71
PRIM1-205ENST00000550224 AXIN2Q9Y2T1 843 aa10.64□□□□□ -0.71
PRIM1-205ENST00000550224 MAGI1Q96QZ7 1491 aaPredicted RBP10.63□□□□□ -0.71
PRIM1-205ENST00000550224 GTPBP6O43824 516 aaPredicted RBP10.63□□□□□ -0.71
PRIM1-205ENST00000550224 HCSTQ9UBK5 93 aa10.63□□□□□ -0.71
PRIM1-205ENST00000550224 NUDT7P0C024 238 aa10.62□□□□□ -0.71
PRIM1-205ENST00000550224 VPS8Q8N3P4 1428 aa10.61□□□□□ -0.71
PRIM1-205ENST00000550224 PBX2P40425 430 aa10.6□□□□□ -0.71
PRIM1-205ENST00000550224 PBRM1Q86U86 1689 aa10.6□□□□□ -0.71
PRIM1-205ENST00000550224 ZNF608Q9ULD9 1512 aaPredicted RBP10.59□□□□□ -0.71
PRIM1-205ENST00000550224 KIF3CO14782 793 aa10.59□□□□□ -0.71
PRIM1-205ENST00000550224 EFCAB5A4FU69 1503 aa10.58□□□□□ -0.72
PRIM1-205ENST00000550224 SYNJ2O15056 1496 aa10.57□□□□□ -0.72
PRIM1-205ENST00000550224 LHX6Q9UPM6 363 aa10.57□□□□□ -0.72
PRIM1-205ENST00000550224 EIF4G3O43432 1585 aaKnown RBP10.56□□□□□ -0.72
PRIM1-205ENST00000550224 SNAPC4Q5SXM2 1469 aa10.56□□□□□ -0.72
PRIM1-205ENST00000550224 FMN1Q68DA7 1419 aa10.55□□□□□ -0.72
PRIM1-205ENST00000550224 ADAMTS12P58397 1594 aa10.55□□□□□ -0.72
PRIM1-205ENST00000550224 KIAA0586Q9BVV6 1533 aa10.54□□□□□ -0.72
PRIM1-205ENST00000550224 CTTNBP2Q8WZ74 1663 aa10.54□□□□□ -0.72
PRIM1-205ENST00000550224 PCGF6Q9BYE7 350 aa10.54□□□□□ -0.72
PRIM1-205ENST00000550224 C2orf72A6NCS6 295 aa10.53□□□□□ -0.72
PRIM1-205ENST00000550224 BBXQ8WY36 941 aaPredicted RBP10.53□□□□□ -0.72
PRIM1-205ENST00000550224 GRIN2AQ12879 1464 aa10.53□□□□□ -0.72
PRIM1-205ENST00000550224 ARHGAP35Q9NRY4 1499 aa10.53□□□□□ -0.72
PRIM1-205ENST00000550224 RYDENQ9NUL5 291 aaKnown RBP10.52□□□□□ -0.73
PRIM1-205ENST00000550224 POTEEQ6S8J3 1075 aa10.51□□□□□ -0.73
PRIM1-205ENST00000550224 PCDHGA4Q9Y5G9 962 aa10.51□□□□□ -0.73
PRIM1-205ENST00000550224 CARMIL2Q6F5E8 1435 aa10.5□□□□□ -0.73
PRIM1-205ENST00000550224 ADGRD1Q6QNK2 874 aa10.5□□□□□ -0.73
PRIM1-205ENST00000550224 P3H3Q8IVL6 736 aa10.5□□□□□ -0.73
PRIM1-205ENST00000550224 STAC3Q96MF2 364 aa10.5□□□□□ -0.73
PRIM1-205ENST00000550224 IQGAP2Q13576 1575 aa10.5□□□□□ -0.73
PRIM1-205ENST00000550224 ATP1B4Q9UN42 357 aaPredicted RBP10.49□□□□□ -0.73
PRIM1-205ENST00000550224 ARAP1Q96P48 1450 aa10.49□□□□□ -0.73
PRIM1-205ENST00000550224 MAP3K1Q13233 1512 aa10.48□□□□□ -0.73
PRIM1-205ENST00000550224 ARHGAP33O14559 1287 aa10.48□□□□□ -0.73
PRIM1-205ENST00000550224 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
PRIM1-205ENST00000550224 TMC2Q8TDI7 906 aa10.46□□□□□ -0.73
PRIM1-205ENST00000550224 CDK11AQ9UQ88 783 aaPredicted RBP10.46□□□□□ -0.73
PRIM1-205ENST00000550224 UGGT2Q9NYU1 1516 aa10.46□□□□□ -0.74
PRIM1-205ENST00000550224 NUP160Q12769 1436 aa10.45□□□□□ -0.74
PRIM1-205ENST00000550224 CASKIN1Q8WXD9 1431 aa10.45□□□□□ -0.74
PRIM1-205ENST00000550224 NCKAP5LQ9HCH0 1330 aa10.45□□□□□ -0.74
PRIM1-205ENST00000550224 CRISPLD2Q9H0B8 497 aa10.45□□□□□ -0.74
PRIM1-205ENST00000550224 FYCO1Q9BQS8 1478 aa10.44□□□□□ -0.74
PRIM1-205ENST00000550224 CADPS2Q86UW7 1296 aa10.44□□□□□ -0.74
PRIM1-205ENST00000550224 PPARGC1BQ86YN6 1023 aaKnown RBP10.44□□□□□ -0.74
PRIM1-205ENST00000550224 KCTD12Q96CX2 325 aaKnown RBP10.44□□□□□ -0.74
PRIM1-205ENST00000550224 SAMD9Q5K651 1589 aa10.43□□□□□ -0.74
PRIM1-205ENST00000550224 FHOD3Q2V2M9 1422 aa10.42□□□□□ -0.74
PRIM1-205ENST00000550224 GPHNQ9NQX3 736 aaPredicted RBP10.42□□□□□ -0.74
PRIM1-205ENST00000550224 PSDA5PKW4 1024 aaPredicted RBP10.41□□□□□ -0.74
PRIM1-205ENST00000550224 SLC34A2O95436 690 aa10.41□□□□□ -0.74
PRIM1-205ENST00000550224 FOXK1P85037 733 aa10.4□□□□□ -0.74
PRIM1-205ENST00000550224 DSG2Q14126 1118 aa10.4□□□□□ -0.74
PRIM1-205ENST00000550224 CCDC18Q5T9S5 1454 aa10.4□□□□□ -0.74
PRIM1-205ENST00000550224 PSEN2P49810 448 aa10.39□□□□□ -0.75
PRIM1-205ENST00000550224 DMRTA1Q5VZB9 504 aa10.38□□□□□ -0.75
PRIM1-205ENST00000550224 MTUS2Q5JR59 1369 aa10.38□□□□□ -0.75
PRIM1-205ENST00000550224 TTBK1Q5TCY1 1321 aaPredicted RBP10.37□□□□□ -0.75
PRIM1-205ENST00000550224 TK2O00142 265 aa10.37□□□□□ -0.75
PRIM1-205ENST00000550224 PTPN5P54829 565 aa10.37□□□□□ -0.75
PRIM1-205ENST00000550224 CEP170Q5SW79 1584 aa10.37□□□□□ -0.75
PRIM1-205ENST00000550224 ZEB1P37275 1124 aaPredicted RBP10.36□□□□□ -0.75
PRIM1-205ENST00000550224 SPRYD3Q8NCJ5 442 aa10.36□□□□□ -0.75
PRIM1-205ENST00000550224 TIAM1Q13009 1591 aa10.35□□□□□ -0.75
PRIM1-205ENST00000550224 KANK4Q5T7N3 995 aaPredicted RBP10.35□□□□□ -0.75
PRIM1-205ENST00000550224 PAXIP1Q6ZW49 1069 aaPredicted RBP10.35□□□□□ -0.75
PRIM1-205ENST00000550224 PLPP6Q8IY26 295 aa10.35□□□□□ -0.75
PRIM1-205ENST00000550224 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
PRIM1-205ENST00000550224 KIAA0556O60303 1618 aa10.35□□□□□ -0.75
PRIM1-205ENST00000550224 LRRC9Q6ZRR7 1453 aa10.35□□□□□ -0.75
PRIM1-205ENST00000550224 PTPRGP23470 1445 aa10.34□□□□□ -0.75
PRIM1-205ENST00000550224 PRG4Q92954 1404 aaPredicted RBP10.34□□□□□ -0.75
PRIM1-205ENST00000550224 DISP1Q96F81 1524 aa10.34□□□□□ -0.75
PRIM1-205ENST00000550224 HECW1Q76N89 1606 aa10.34□□□□□ -0.75
PRIM1-205ENST00000550224 MFSD10Q14728 455 aa10.34□□□□□ -0.75
PRIM1-205ENST00000550224 HRO43593 1189 aa10.33□□□□□ -0.76
PRIM1-205ENST00000550224 KCNH8Q96L42 1107 aa10.33□□□□□ -0.76
PRIM1-205ENST00000550224 PCF11O94913 1555 aaKnown RBP10.32□□□□□ -0.76
PRIM1-205ENST00000550224 PLEKHD1A6NEE1 506 aa10.32□□□□□ -0.76
PRIM1-205ENST00000550224 PPP1R15BQ5SWA1 713 aa10.32□□□□□ -0.76
PRIM1-205ENST00000550224 CFAP44Q96MT7 982 aa10.32□□□□□ -0.76
PRIM1-205ENST00000550224 IRX2Q9BZI1 471 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms