RNA–Protein interactions for RNA: ENST00000548645.5

NPAS3-206, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,926 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-206ENST00000548645 KIAA0586Q9BVV6 1533 aa30.62■■■□□ 2.49
NPAS3-206ENST00000548645 ZNF777Q9ULD5 760 aaPredicted RBP30.61■■■□□ 2.49
NPAS3-206ENST00000548645 SALL2Q9Y467 1007 aaPredicted RBP30.6■■■□□ 2.49
NPAS3-206ENST00000548645 IL27Q8NEV9 243 aa30.6■■■□□ 2.49
NPAS3-206ENST00000548645 NUP155O75694 1391 aa30.59■■■□□ 2.49
NPAS3-206ENST00000548645 PARD3Q8TEW0 1356 aa30.59■■■□□ 2.49
NPAS3-206ENST00000548645 DDRGK1Q96HY6 314 aa30.58■■■□□ 2.49
NPAS3-206ENST00000548645 KDM2AQ9Y2K7 1162 aa30.57■■■□□ 2.48
NPAS3-206ENST00000548645 IFT140Q96RY7 1462 aa30.57■■■□□ 2.48
NPAS3-206ENST00000548645 WASHC2CQ9Y4E1 1318 aa30.54■■■□□ 2.48
NPAS3-206ENST00000548645 ANO8Q9HCE9 1232 aaPredicted RBP30.54■■■□□ 2.48
NPAS3-206ENST00000548645 DCAF11Q8TEB1 546 aa30.53■■■□□ 2.48
NPAS3-206ENST00000548645 ADCY10Q96PN6 1610 aa30.51■■■□□ 2.48
NPAS3-206ENST00000548645 INSRP06213 1382 aa30.51■■■□□ 2.47
NPAS3-206ENST00000548645 PRKCSHP14314 528 aaPredicted RBP30.5■■■□□ 2.47
NPAS3-206ENST00000548645 CDCA7LQ96GN5 454 aa30.5■■■□□ 2.47
NPAS3-206ENST00000548645 KDM5DQ9BY66 1539 aa30.5■■■□□ 2.47
NPAS3-206ENST00000548645 CEP170Q5SW79 1584 aa30.49■■■□□ 2.47
NPAS3-206ENST00000548645 SHANK2Q9UPX8 1470 aa30.46■■■□□ 2.47
NPAS3-206ENST00000548645 ZMYM4Q5VZL5 1548 aa30.46■■■□□ 2.47
NPAS3-206ENST00000548645 PLIN1O60240 522 aa30.44■■■□□ 2.46
NPAS3-206ENST00000548645 CRBNQ96SW2 442 aa30.44■■■□□ 2.46
NPAS3-206ENST00000548645 FBLN2P98095 1184 aa30.44■■■□□ 2.46
NPAS3-206ENST00000548645 C9orf84Q5VXU9 1444 aa30.44■■■□□ 2.46
NPAS3-206ENST00000548645 PER1O15534 1290 aaPredicted RBP30.43■■■□□ 2.46
NPAS3-206ENST00000548645 BLMP54132 1417 aaPredicted RBP30.43■■■□□ 2.46
NPAS3-206ENST00000548645 RTN4Q9NQC3 1192 aaKnown RBP30.42■■■□□ 2.46
NPAS3-206ENST00000548645 PLEKHH2Q8IVE3 1493 aa30.4■■■□□ 2.46
NPAS3-206ENST00000548645 PTPRGP23470 1445 aa30.39■■■□□ 2.46
NPAS3-206ENST00000548645 PLB1Q6P1J6 1458 aa30.37■■■□□ 2.45
NPAS3-206ENST00000548645 TSPY4P0CV99 314 aa30.37■■■□□ 2.45
NPAS3-206ENST00000548645 TSPY10P0CW01 314 aa30.37■■■□□ 2.45
NPAS3-206ENST00000548645 GSE1Q14687 1217 aa30.36■■■□□ 2.45
NPAS3-206ENST00000548645 PRAG1Q86YV5 1406 aa30.35■■■□□ 2.45
NPAS3-206ENST00000548645 CDC42BPAQ5VT25 1732 aa30.35■■■□□ 2.45
NPAS3-206ENST00000548645 GRIN2AQ12879 1464 aa30.35■■■□□ 2.45
NPAS3-206ENST00000548645 TRPM1Q7Z4N2 1603 aa30.34■■■□□ 2.45
NPAS3-206ENST00000548645 DAXXQ9UER7 740 aaPredicted RBP30.33■■■□□ 2.45
NPAS3-206ENST00000548645 EIF4G3O43432 1585 aaKnown RBP30.33■■■□□ 2.45
NPAS3-206ENST00000548645 NFKBIBQ15653 356 aa30.32■■■□□ 2.44
NPAS3-206ENST00000548645 CC2D1BQ5T0F9 858 aaKnown RBP30.32■■■□□ 2.44
NPAS3-206ENST00000548645 SKAP1Q86WV1 359 aa30.32■■■□□ 2.44
NPAS3-206ENST00000548645 COL17A1Q9UMD9 1497 aaPredicted RBP30.31■■■□□ 2.44
NPAS3-206ENST00000548645 KDM2BQ8NHM5 1336 aa30.3■■■□□ 2.44
NPAS3-206ENST00000548645 CENPQQ7L2Z9 268 aaPredicted RBP30.29■■■□□ 2.44
NPAS3-206ENST00000548645 CHMP7Q8WUX9 453 aaPredicted RBP30.29■■■□□ 2.44
NPAS3-206ENST00000548645 GPRASP1Q5JY77 1395 aa30.29■■■□□ 2.44
NPAS3-206ENST00000548645 PLEKHD1A6NEE1 506 aa30.27■■■□□ 2.44
NPAS3-206ENST00000548645 CCDC144AA2RUR9 1427 aa30.25■■■□□ 2.43
NPAS3-206ENST00000548645 ABCC10Q5T3U5 1492 aa30.25■■■□□ 2.43
NPAS3-206ENST00000548645 NBPF1Q3BBV0 1214 aa30.25■■■□□ 2.43
NPAS3-206ENST00000548645 PANK3Q9H999 370 aa30.25■■■□□ 2.43
NPAS3-206ENST00000548645 C20orf194Q5TEA3 1177 aa30.24■■■□□ 2.43
NPAS3-206ENST00000548645 FAM161AQ3B820 660 aa30.23■■■□□ 2.43
NPAS3-206ENST00000548645 FAM135AQ9P2D6 1515 aa30.22■■■□□ 2.43
NPAS3-206ENST00000548645 TESK2Q96S53 571 aa30.22■■■□□ 2.43
NPAS3-206ENST00000548645 LAMC1P11047 1609 aa30.22■■■□□ 2.43
NPAS3-206ENST00000548645 DISP3Q9P2K9 1392 aa30.22■■■□□ 2.43
NPAS3-206ENST00000548645 SLC4A3P48751 1232 aa30.2■■■□□ 2.42
NPAS3-206ENST00000548645 BRPF3Q9ULD4 1205 aa30.2■■■□□ 2.42
NPAS3-206ENST00000548645 CARMIL2Q6F5E8 1435 aa30.2■■■□□ 2.42
NPAS3-206ENST00000548645 PRDM15P57071 1507 aaPredicted RBP30.19■■■□□ 2.42
NPAS3-206ENST00000548645 MAGI1Q96QZ7 1491 aaPredicted RBP30.19■■■□□ 2.42
NPAS3-206ENST00000548645 ARHGEF5Q12774 1597 aa30.19■■■□□ 2.42
NPAS3-206ENST00000548645 ERBINQ96RT1 1412 aa30.19■■■□□ 2.42
NPAS3-206ENST00000548645 RGL3Q3MIN7 710 aa30.18■■■□□ 2.42
NPAS3-206ENST00000548645 TMF1P82094 1093 aa30.17■■■□□ 2.42
NPAS3-206ENST00000548645 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.17■■■□□ 2.42
NPAS3-206ENST00000548645 ADAMTS8Q9UP79 889 aa30.16■■■□□ 2.42
NPAS3-206ENST00000548645 FRAT1Q92837 279 aaPredicted RBP30.16■■■□□ 2.42
NPAS3-206ENST00000548645 HNRNPMP52272 730 aaKnown RBP eCLIP30.16■■■□□ 2.42
NPAS3-206ENST00000548645 C8orf34Q49A92 452 aa30.16■■■□□ 2.42
NPAS3-206ENST00000548645 DUSP27Q5VZP5 1158 aa30.13■■■□□ 2.41
NPAS3-206ENST00000548645 A2MP01023 1474 aa30.13■■■□□ 2.41
NPAS3-206ENST00000548645 EIF2AK4Q9P2K8 1649 aaKnown RBP30.1■■■□□ 2.41
NPAS3-206ENST00000548645 WDR43Q15061 677 aaKnown RBP eCLIP30.1■■■□□ 2.41
NPAS3-206ENST00000548645 PLEKHH1Q9ULM0 1364 aa30.08■■■□□ 2.41
NPAS3-206ENST00000548645 CCDC141Q6ZP82 1450 aa30.08■■■□□ 2.41
NPAS3-206ENST00000548645 ABCA8O94911 1581 aa30.08■■■□□ 2.41
NPAS3-206ENST00000548645 GOLGA2Q08379 1002 aa30.08■■■□□ 2.41
NPAS3-206ENST00000548645 ATP10BO94823 1461 aa30.08■■■□□ 2.41
NPAS3-206ENST00000548645 ZBTB4Q9P1Z0 1013 aaPredicted RBP30.07■■■□□ 2.4
NPAS3-206ENST00000548645 PLA2R1Q13018 1463 aa30.06■■■□□ 2.4
NPAS3-206ENST00000548645 RSPH4AQ5TD94 716 aa30.06■■■□□ 2.4
NPAS3-206ENST00000548645 ZNF521Q96K83 1311 aa30.06■■■□□ 2.4
NPAS3-206ENST00000548645 NUP160Q12769 1436 aa30.05■■■□□ 2.4
NPAS3-206ENST00000548645 JPH4Q96JJ6 628 aa30.05■■■□□ 2.4
NPAS3-206ENST00000548645 SYNJ2O15056 1496 aa30.04■■■□□ 2.4
NPAS3-206ENST00000548645 PPP2R1AP30153 589 aa30.03■■■□□ 2.4
NPAS3-206ENST00000548645 KNSTRNQ9Y448 316 aa30.02■■■□□ 2.4
NPAS3-206ENST00000548645 RGS3P49796 1198 aa30.01■■■□□ 2.39
NPAS3-206ENST00000548645 FRAT2O75474 233 aaPredicted RBP30■■■□□ 2.39
NPAS3-206ENST00000548645 EIF3AQ14152 1382 aaKnown RBP29.99■■■□□ 2.39
NPAS3-206ENST00000548645 UNC13BO14795 1591 aa29.99■■■□□ 2.39
NPAS3-206ENST00000548645 CLASP1Q7Z460 1538 aa29.99■■■□□ 2.39
NPAS3-206ENST00000548645 SLFN5Q08AF3 891 aa29.98■■■□□ 2.39
NPAS3-206ENST00000548645 MYO5CQ9NQX4 1742 aa29.98■■■□□ 2.39
NPAS3-206ENST00000548645 SAMD9LQ8IVG5 1584 aa29.96■■■□□ 2.39
NPAS3-206ENST00000548645 WDR7Q9Y4E6 1490 aa29.96■■■□□ 2.39
NPAS3-206ENST00000548645 MAGI2Q86UL8 1455 aa29.95■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms