RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 PDE3BQ13370 1112 aa12.34□□□□□ -0.43
CALCOCO1-210ENST00000548263 HECW1Q76N89 1606 aa12.33□□□□□ -0.44
CALCOCO1-210ENST00000548263 BECN1Q14457 450 aa12.33□□□□□ -0.44
CALCOCO1-210ENST00000548263 PNISRQ8TF01 805 aaKnown RBP12.33□□□□□ -0.44
CALCOCO1-210ENST00000548263 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 FRAT1Q92837 279 aaPredicted RBP12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 SUPT6HQ7KZ85 1726 aaKnown RBP12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 DAPK1P53355 1430 aa12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 PBRM1Q86U86 1689 aa12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 STK26Q9P289 416 aa12.32□□□□□ -0.44
CALCOCO1-210ENST00000548263 CDCA7LQ96GN5 454 aa12.31□□□□□ -0.44
CALCOCO1-210ENST00000548263 EIF4G3O43432 1585 aaKnown RBP12.3□□□□□ -0.44
CALCOCO1-210ENST00000548263 USP35Q9P2H5 1018 aa12.3□□□□□ -0.44
CALCOCO1-210ENST00000548263 PTPN23Q9H3S7 1636 aa12.3□□□□□ -0.44
CALCOCO1-210ENST00000548263 NUP153P49790 1475 aaKnown RBP12.3□□□□□ -0.44
CALCOCO1-210ENST00000548263 ABCC5O15440 1437 aa12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 NBPF1Q3BBV0 1214 aa12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 CTTNBP2Q8WZ74 1663 aa12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 MAGI1Q96QZ7 1491 aaPredicted RBP12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 PANK3Q9H999 370 aa12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 SMG6Q86US8 1419 aaKnown RBP12.29□□□□□ -0.44
CALCOCO1-210ENST00000548263 HSP90AA1P07900 732 aaKnown RBP12.28□□□□□ -0.44
CALCOCO1-210ENST00000548263 CDCA8Q53HL2 280 aa12.28□□□□□ -0.44
CALCOCO1-210ENST00000548263 ARHGAP5Q13017 1502 aa12.28□□□□□ -0.44
CALCOCO1-210ENST00000548263 MS4A1P11836 297 aa12.28□□□□□ -0.44
CALCOCO1-210ENST00000548263 ADAMTS12P58397 1594 aa12.27□□□□□ -0.44
CALCOCO1-210ENST00000548263 IL27Q8NEV9 243 aa12.27□□□□□ -0.44
CALCOCO1-210ENST00000548263 TRHP20396 242 aaPredicted RBP12.27□□□□□ -0.45
CALCOCO1-210ENST00000548263 C9orf84Q5VXU9 1444 aa12.27□□□□□ -0.45
CALCOCO1-210ENST00000548263 CCDC144AA2RUR9 1427 aa12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 RAPGEF3O95398 923 aa12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 MIA2Q96PC5 1412 aa12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 SLKQ9H2G2 1235 aaPredicted RBP12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 MAGI3Q5TCQ9 1506 aa12.26□□□□□ -0.45
CALCOCO1-210ENST00000548263 GOLGA2Q08379 1002 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 CCDC146Q8IYE0 955 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 WASHC2CQ9Y4E1 1318 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 NCOA1Q15788 1441 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 GSE1Q14687 1217 aa12.25□□□□□ -0.45
CALCOCO1-210ENST00000548263 TRAK1Q9UPV9 953 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 DISP1Q96F81 1524 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 RSPH4AQ5TD94 716 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 SPRYD3Q8NCJ5 442 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 ANO8Q9HCE9 1232 aaPredicted RBP12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 CAMSAP2Q08AD1 1489 aa12.24□□□□□ -0.45
CALCOCO1-210ENST00000548263 ANKRD30BQ9BXX2 1392 aa12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 BACH2Q9BYV9 841 aa12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 ATP10BO94823 1461 aa12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 BRD4O60885 1362 aaPredicted RBP12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 KANK1Q14678 1352 aa12.23□□□□□ -0.45
CALCOCO1-210ENST00000548263 SKAP1Q86WV1 359 aa12.22□□□□□ -0.45
CALCOCO1-210ENST00000548263 SLC24A1O60721 1099 aa12.22□□□□□ -0.45
CALCOCO1-210ENST00000548263 SCAPERQ9BY12 1400 aa12.21□□□□□ -0.45
CALCOCO1-210ENST00000548263 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
CALCOCO1-210ENST00000548263 CENPQQ7L2Z9 268 aaPredicted RBP12.21□□□□□ -0.45
CALCOCO1-210ENST00000548263 FAM69CQ0P6D2 419 aa12.21□□□□□ -0.46
CALCOCO1-210ENST00000548263 GPATCH8Q9UKJ3 1502 aaKnown RBP12.21□□□□□ -0.46
CALCOCO1-210ENST00000548263 NFKBIBQ15653 356 aa12.2□□□□□ -0.46
CALCOCO1-210ENST00000548263 UGGT2Q9NYU1 1516 aa12.2□□□□□ -0.46
CALCOCO1-210ENST00000548263 TMEM132EQ6IEE7 984 aa12.19□□□□□ -0.46
CALCOCO1-210ENST00000548263 FTSJ3Q8IY81 847 aaKnown RBP12.19□□□□□ -0.46
CALCOCO1-210ENST00000548263 KIAA0556O60303 1618 aa12.19□□□□□ -0.46
CALCOCO1-210ENST00000548263 SOX12O15370 315 aa12.18□□□□□ -0.46
CALCOCO1-210ENST00000548263 ADAMTS8Q9UP79 889 aa12.18□□□□□ -0.46
CALCOCO1-210ENST00000548263 POGKQ9P215 609 aa12.18□□□□□ -0.46
CALCOCO1-210ENST00000548263 NUTM2FA1L443 756 aa12.17□□□□□ -0.46
CALCOCO1-210ENST00000548263 BRPF3Q9ULD4 1205 aa12.17□□□□□ -0.46
CALCOCO1-210ENST00000548263 RAPGEF6Q8TEU7 1601 aa12.17□□□□□ -0.46
CALCOCO1-210ENST00000548263 ANP32BQ92688 251 aaKnown RBP12.17□□□□□ -0.46
CALCOCO1-210ENST00000548263 GZF1Q9H116 711 aaPredicted RBP12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 CFAP43Q8NDM7 1665 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 APAF1O14727 1248 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 CFAP70Q5T0N1 1121 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 KIAA1107Q9UPP5 1409 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 CHD1O14646 1710 aa12.16□□□□□ -0.46
CALCOCO1-210ENST00000548263 CLUAP1Q96AJ1 413 aa12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 CFAP53Q96M91 514 aa12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 CEP170Q5SW79 1584 aa12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 NAP1L5Q96NT1 182 aaPredicted RBP12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 RPRD2Q5VT52 1461 aaKnown RBP12.15□□□□□ -0.46
CALCOCO1-210ENST00000548263 GLIPR1L2Q4G1C9 344 aa12.14□□□□□ -0.47
CALCOCO1-210ENST00000548263 SAMD9Q5K651 1589 aa12.14□□□□□ -0.47
CALCOCO1-210ENST00000548263 MORC1Q86VD1 984 aa12.13□□□□□ -0.47
CALCOCO1-210ENST00000548263 COG6Q9Y2V7 657 aa12.13□□□□□ -0.47
CALCOCO1-210ENST00000548263 TRIM44Q96DX7 344 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-210ENST00000548263 PLEKHH2Q8IVE3 1493 aa12.12□□□□□ -0.47
CALCOCO1-210ENST00000548263 FRAT2O75474 233 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-210ENST00000548263 RRP7AQ9Y3A4 280 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-210ENST00000548263 L1TD1Q5T7N2 865 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-210ENST00000548263 CENPJQ9HC77 1338 aaPredicted RBP12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 ROCK1Q13464 1354 aa12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 BCL2L13Q9BXK5 485 aa12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 ZBTB7CA1YPR0 619 aa12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 C20orf194Q5TEA3 1177 aa12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 U2SURPO15042 1029 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-210ENST00000548263 NUP160Q12769 1436 aa12.1□□□□□ -0.47
CALCOCO1-210ENST00000548263 KIF14Q15058 1648 aa12.1□□□□□ -0.47
CALCOCO1-210ENST00000548263 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
CALCOCO1-210ENST00000548263 SHROOM2Q13796 1616 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 124.5 ms