RNA–Protein interactions for RNA: ENST00000548263.5

CALCOCO1-210, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 1 (best) BASIC

Gene CALCOCO1, Length 3,888 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-210ENST00000548263 NISCHQ9Y2I1 1504 aa17.96■□□□□ 0.47
CALCOCO1-210ENST00000548263 DCAF8L2P0C7V8 631 aa16.83■□□□□ 0.28
CALCOCO1-210ENST00000548263 SHROOM4Q9ULL8 1493 aa16.41■□□□□ 0.22
CALCOCO1-210ENST00000548263 SUPT5HO00267 1087 aaKnown RBP16.16■□□□□ 0.18
CALCOCO1-210ENST00000548263 CCDC180Q9P1Z9 1646 aa15.53■□□□□ 0.08
CALCOCO1-210ENST00000548263 PCGF6Q9BYE7 350 aa15.51■□□□□ 0.07
CALCOCO1-210ENST00000548263 EHMT2Q96KQ7 1210 aa15.43■□□□□ 0.06
CALCOCO1-210ENST00000548263 HRCP23327 699 aa15.27■□□□□ 0.04
CALCOCO1-210ENST00000548263 ABCC9O60706 1549 aa15.21■□□□□ 0.02
CALCOCO1-210ENST00000548263 CHIC1Q5VXU3 224 aa15.18■□□□□ 0.02
CALCOCO1-210ENST00000548263 FAM9AQ8IZU1 332 aaPredicted RBP15.15■□□□□ 0.02
CALCOCO1-210ENST00000548263 PPARGC1BQ86YN6 1023 aaKnown RBP15.09■□□□□ 0.01
CALCOCO1-210ENST00000548263 LOC105371045A0A1W2PR82 267 aa15.02■□□□□ -0
CALCOCO1-210ENST00000548263 ZCCHC6Q5VYS8 1495 aaKnown RBP14.98□□□□□ -0.01
CALCOCO1-210ENST00000548263 PABPN1Q86U42 306 aaKnown RBP eCLIP14.88□□□□□ -0.03
CALCOCO1-210ENST00000548263 TRIM26Q12899 539 aaPredicted RBP14.88□□□□□ -0.03
CALCOCO1-210ENST00000548263 TRIM41Q8WV44 630 aa14.85□□□□□ -0.03
CALCOCO1-210ENST00000548263 ZEB1P37275 1124 aaPredicted RBP14.84□□□□□ -0.03
CALCOCO1-210ENST00000548263 TTBK1Q5TCY1 1321 aaPredicted RBP14.8□□□□□ -0.04
CALCOCO1-210ENST00000548263 SCRIBQ14160 1630 aa14.73□□□□□ -0.05
CALCOCO1-210ENST00000548263 RANGAP1P46060 587 aaPredicted RBP14.68□□□□□ -0.06
CALCOCO1-210ENST00000548263 PELP1Q8IZL8 1130 aaKnown RBP14.67□□□□□ -0.06
CALCOCO1-210ENST00000548263 MYO15BQ96JP2 1530 aa14.67□□□□□ -0.06
CALCOCO1-210ENST00000548263 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
CALCOCO1-210ENST00000548263 DCAF1Q9Y4B6 1507 aa14.53□□□□□ -0.08
CALCOCO1-210ENST00000548263 CENPBP07199 599 aaPredicted RBP14.52□□□□□ -0.08
CALCOCO1-210ENST00000548263 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.43□□□□□ -0.1
CALCOCO1-210ENST00000548263 UBTFP17480 764 aaKnown RBP14.42□□□□□ -0.1
CALCOCO1-210ENST00000548263 YTHDC1Q96MU7 727 aaKnown RBP14.38□□□□□ -0.11
CALCOCO1-210ENST00000548263 UNC13AQ9UPW8 1703 aa14.36□□□□□ -0.11
CALCOCO1-210ENST00000548263 NACADO15069 1562 aa14.34□□□□□ -0.11
CALCOCO1-210ENST00000548263 APLP2Q06481 763 aa14.34□□□□□ -0.11
CALCOCO1-210ENST00000548263 CECR2Q9BXF3 1484 aa14.32□□□□□ -0.12
CALCOCO1-210ENST00000548263 RSF1Q96T23 1441 aaPredicted RBP14.32□□□□□ -0.12
CALCOCO1-210ENST00000548263 DIEXFQ68CQ4 756 aaKnown RBP14.28□□□□□ -0.12
CALCOCO1-210ENST00000548263 RB1CC1Q8TDY2 1594 aa14.23□□□□□ -0.13
CALCOCO1-210ENST00000548263 SCAF1Q9H7N4 1312 aaKnown RBP14.23□□□□□ -0.13
CALCOCO1-210ENST00000548263 GTF3C3Q9Y5Q9 886 aa14.21□□□□□ -0.14
CALCOCO1-210ENST00000548263 ACIN1Q9UKV3 1341 aaKnown RBP14.17□□□□□ -0.14
CALCOCO1-210ENST00000548263 ATP1B4Q9UN42 357 aaPredicted RBP14.17□□□□□ -0.14
CALCOCO1-210ENST00000548263 HNRNPUL2Q1KMD3 747 aaKnown RBP14.15□□□□□ -0.14
CALCOCO1-210ENST00000548263 MYT1Q01538 1121 aa14.12□□□□□ -0.15
CALCOCO1-210ENST00000548263 BICRAQ9NZM4 1560 aa14.09□□□□□ -0.15
CALCOCO1-210ENST00000548263 MROH2BQ7Z745 1585 aa14.09□□□□□ -0.15
CALCOCO1-210ENST00000548263 NEUROD1Q13562 356 aa14.08□□□□□ -0.16
CALCOCO1-210ENST00000548263 ZNF316A6NFI3 1004 aaPredicted RBP13.99□□□□□ -0.17
CALCOCO1-210ENST00000548263 ITGAEP38570 1179 aa13.96□□□□□ -0.17
CALCOCO1-210ENST00000548263 WIZO95785 1651 aa13.95□□□□□ -0.18
CALCOCO1-210ENST00000548263 CSRNP3Q8WYN3 585 aa13.93□□□□□ -0.18
CALCOCO1-210ENST00000548263 BAZ1AQ9NRL2 1556 aaPredicted RBP13.86□□□□□ -0.19
CALCOCO1-210ENST00000548263 P3H3Q8IVL6 736 aa13.83□□□□□ -0.2
CALCOCO1-210ENST00000548263 ABCC8Q09428 1581 aa13.82□□□□□ -0.2
CALCOCO1-210ENST00000548263 CCDC88BA6NC98 1476 aa13.8□□□□□ -0.2
CALCOCO1-210ENST00000548263 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.2
CALCOCO1-210ENST00000548263 MIER1Q8N108 512 aa13.77□□□□□ -0.21
CALCOCO1-210ENST00000548263 SOGA1O94964 1423 aa13.76□□□□□ -0.21
CALCOCO1-210ENST00000548263 NEFLP07196 543 aa13.76□□□□□ -0.21
CALCOCO1-210ENST00000548263 ARID3CA6NKF2 412 aa13.72□□□□□ -0.21
CALCOCO1-210ENST00000548263 WRNQ14191 1432 aaPredicted RBP eCLIP13.7□□□□□ -0.22
CALCOCO1-210ENST00000548263 BCANQ96GW7 911 aa13.67□□□□□ -0.22
CALCOCO1-210ENST00000548263 CEP162Q5TB80 1403 aa13.67□□□□□ -0.22
CALCOCO1-210ENST00000548263 ERICH6Q7L0X2 663 aa13.65□□□□□ -0.22
CALCOCO1-210ENST00000548263 SMARCA4P51532 1647 aa13.65□□□□□ -0.22
CALCOCO1-210ENST00000548263 FBLN2P98095 1184 aa13.64□□□□□ -0.23
CALCOCO1-210ENST00000548263 RUSC2Q8N2Y8 1516 aa13.61□□□□□ -0.23
CALCOCO1-210ENST00000548263 FAM50AQ14320 339 aaKnown RBP13.6□□□□□ -0.23
CALCOCO1-210ENST00000548263 TOP2AP11388 1531 aaKnown RBP13.58□□□□□ -0.23
CALCOCO1-210ENST00000548263 ATAD2BQ9ULI0 1458 aa13.58□□□□□ -0.24
CALCOCO1-210ENST00000548263 TNIKQ9UKE5 1360 aa13.56□□□□□ -0.24
CALCOCO1-210ENST00000548263 PEG3Q9GZU2 1588 aa13.51□□□□□ -0.25
CALCOCO1-210ENST00000548263 CLIP1P30622 1438 aa13.5□□□□□ -0.25
CALCOCO1-210ENST00000548263 SMARCA2P51531 1590 aa13.49□□□□□ -0.25
CALCOCO1-210ENST00000548263 EIF4G1Q04637 1599 aaKnown RBP13.48□□□□□ -0.25
CALCOCO1-210ENST00000548263 GOLGA3Q08378 1498 aa13.46□□□□□ -0.25
CALCOCO1-210ENST00000548263 EEA1Q15075 1411 aa13.45□□□□□ -0.26
CALCOCO1-210ENST00000548263 DNAJC5BQ9UF47 199 aa13.45□□□□□ -0.26
CALCOCO1-210ENST00000548263 FKBP8Q14318 412 aa13.45□□□□□ -0.26
CALCOCO1-210ENST00000548263 DDX10Q13206 875 aaKnown RBP13.44□□□□□ -0.26
CALCOCO1-210ENST00000548263 CLSPNQ9HAW4 1339 aa13.43□□□□□ -0.26
CALCOCO1-210ENST00000548263 ANP32CO43423 234 aa13.41□□□□□ -0.26
CALCOCO1-210ENST00000548263 CNGB1Q14028 1251 aaPredicted RBP13.39□□□□□ -0.27
CALCOCO1-210ENST00000548263 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
CALCOCO1-210ENST00000548263 CC2D2AQ9P2K1 1620 aa13.37□□□□□ -0.27
CALCOCO1-210ENST00000548263 CUX2O14529 1486 aa13.36□□□□□ -0.27
CALCOCO1-210ENST00000548263 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
CALCOCO1-210ENST00000548263 CEP164Q9UPV0 1460 aa13.35□□□□□ -0.27
CALCOCO1-210ENST00000548263 TRIM52Q96A61 297 aa13.35□□□□□ -0.27
CALCOCO1-210ENST00000548263 HIRIP3Q9BW71 556 aaPredicted RBP13.35□□□□□ -0.27
CALCOCO1-210ENST00000548263 RAPGEF2Q9Y4G8 1499 aa13.34□□□□□ -0.27
CALCOCO1-210ENST00000548263 KANK4Q5T7N3 995 aaPredicted RBP13.33□□□□□ -0.28
CALCOCO1-210ENST00000548263 POLR3GLQ9BT43 218 aa13.33□□□□□ -0.28
CALCOCO1-210ENST00000548263 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
CALCOCO1-210ENST00000548263 CADPSQ9ULU8 1353 aa13.29□□□□□ -0.28
CALCOCO1-210ENST00000548263 CHIC2Q9UKJ5 165 aa13.29□□□□□ -0.28
CALCOCO1-210ENST00000548263 CDK11AQ9UQ88 783 aaPredicted RBP13.28□□□□□ -0.28
CALCOCO1-210ENST00000548263 ZNF777Q9ULD5 760 aaPredicted RBP13.27□□□□□ -0.28
CALCOCO1-210ENST00000548263 CARMIL1Q5VZK9 1371 aa13.26□□□□□ -0.29
CALCOCO1-210ENST00000548263 HMGXB3Q12766 1538 aa13.26□□□□□ -0.29
CALCOCO1-210ENST00000548263 SYNJ1O43426 1573 aa13.25□□□□□ -0.29
CALCOCO1-210ENST00000548263 VPS8Q8N3P4 1428 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms