RNA–Protein interactions for RNA: ENST00000547392.5

CACNB3-205, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5 BASIC

Gene CACNB3, Length 2,237 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-205ENST00000547392 ARHGAP5Q13017 1502 aa29.48■■■□□ 2.31
CACNB3-205ENST00000547392 MYO5CQ9NQX4 1742 aa29.47■■■□□ 2.31
CACNB3-205ENST00000547392 PPP4R2Q9NY27 417 aa29.47■■■□□ 2.31
CACNB3-205ENST00000547392 DCAF11Q8TEB1 546 aa29.45■■■□□ 2.3
CACNB3-205ENST00000547392 E9PCH4 1651 aa29.45■■■□□ 2.3
CACNB3-205ENST00000547392 TRPM1Q7Z4N2 1603 aa29.45■■■□□ 2.3
CACNB3-205ENST00000547392 IRX6P78412 446 aaPredicted RBP29.44■■■□□ 2.3
CACNB3-205ENST00000547392 KTN1Q86UP2 1357 aaKnown RBP29.44■■■□□ 2.3
CACNB3-205ENST00000547392 IQGAP3Q86VI3 1631 aa29.44■■■□□ 2.3
CACNB3-205ENST00000547392 SMG6Q86US8 1419 aaKnown RBP29.43■■■□□ 2.3
CACNB3-205ENST00000547392 CCDC144AA2RUR9 1427 aa29.42■■■□□ 2.3
CACNB3-205ENST00000547392 PRAG1Q86YV5 1406 aa29.42■■■□□ 2.3
CACNB3-205ENST00000547392 KDM2AQ9Y2K7 1162 aa29.41■■■□□ 2.3
CACNB3-205ENST00000547392 ST20-MTHFSA0A0A6YYL1 179 aa29.4■■■□□ 2.3
CACNB3-205ENST00000547392 POLR3GLQ9BT43 218 aa29.4■■■□□ 2.3
CACNB3-205ENST00000547392 PLA2R1Q13018 1463 aa29.4■■■□□ 2.3
CACNB3-205ENST00000547392 LAMC1P11047 1609 aa29.39■■■□□ 2.3
CACNB3-205ENST00000547392 DUOX2Q9NRD8 1548 aa29.38■■■□□ 2.29
CACNB3-205ENST00000547392 MAGI2Q86UL8 1455 aa29.37■■■□□ 2.29
CACNB3-205ENST00000547392 ANP32EQ9BTT0 268 aa29.37■■■□□ 2.29
CACNB3-205ENST00000547392 GPRASP1Q5JY77 1395 aa29.36■■■□□ 2.29
CACNB3-205ENST00000547392 PNISRQ8TF01 805 aaKnown RBP29.36■■■□□ 2.29
CACNB3-205ENST00000547392 ATP10AO60312 1499 aa29.35■■■□□ 2.29
CACNB3-205ENST00000547392 ERBINQ96RT1 1412 aa29.33■■■□□ 2.29
CACNB3-205ENST00000547392 BRD4O60885 1362 aaPredicted RBP29.33■■■□□ 2.29
CACNB3-205ENST00000547392 RALBP1Q15311 655 aa29.32■■■□□ 2.28
CACNB3-205ENST00000547392 UHRF1BP1LA0JNW5 1464 aa29.32■■■□□ 2.28
CACNB3-205ENST00000547392 A2MP01023 1474 aa29.32■■■□□ 2.28
CACNB3-205ENST00000547392 PLCH2O75038 1416 aa29.31■■■□□ 2.28
CACNB3-205ENST00000547392 LRPPRCP42704 1394 aaKnown RBP29.3■■■□□ 2.28
CACNB3-205ENST00000547392 NUDCQ9Y266 331 aa29.3■■■□□ 2.28
CACNB3-205ENST00000547392 RNF123Q5XPI4 1314 aa29.29■■■□□ 2.28
CACNB3-205ENST00000547392 MYBBP1AQ9BQG0 1328 aaKnown RBP29.29■■■□□ 2.28
CACNB3-205ENST00000547392 EIF2AK4Q9P2K8 1649 aaKnown RBP29.28■■■□□ 2.28
CACNB3-205ENST00000547392 TMC1Q8TDI8 760 aa29.28■■■□□ 2.28
CACNB3-205ENST00000547392 ZCCHC11Q5TAX3 1644 aaKnown RBP29.27■■■□□ 2.28
CACNB3-205ENST00000547392 PRDM15P57071 1507 aaPredicted RBP29.27■■■□□ 2.28
CACNB3-205ENST00000547392 ABCC1P33527 1531 aa29.24■■■□□ 2.27
CACNB3-205ENST00000547392 COL17A1Q9UMD9 1497 aaPredicted RBP29.21■■■□□ 2.27
CACNB3-205ENST00000547392 EFCAB2Q5VUJ9 269 aa29.21■■■□□ 2.27
CACNB3-205ENST00000547392 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.21■■■□□ 2.27
CACNB3-205ENST00000547392 FANCIQ9NVI1 1328 aa29.2■■■□□ 2.26
CACNB3-205ENST00000547392 CNGB1Q14028 1251 aaPredicted RBP29.2■■■□□ 2.26
CACNB3-205ENST00000547392 PARD3Q8TEW0 1356 aa29.19■■■□□ 2.26
CACNB3-205ENST00000547392 NBPF1Q3BBV0 1214 aa29.18■■■□□ 2.26
CACNB3-205ENST00000547392 ARAP3Q8WWN8 1544 aa29.18■■■□□ 2.26
CACNB3-205ENST00000547392 RGL3Q3MIN7 710 aa29.17■■■□□ 2.26
CACNB3-205ENST00000547392 WASHC2CQ9Y4E1 1318 aa29.16■■■□□ 2.26
CACNB3-205ENST00000547392 RNF17Q9BXT8 1623 aaKnown RBP29.15■■■□□ 2.26
CACNB3-205ENST00000547392 PER1O15534 1290 aaPredicted RBP29.13■■■□□ 2.25
CACNB3-205ENST00000547392 B4GALNT3Q6L9W6 998 aa29.13■■■□□ 2.25
CACNB3-205ENST00000547392 TESK2Q96S53 571 aa29.13■■■□□ 2.25
CACNB3-205ENST00000547392 RTEL1-TNFRSF6BF6WH68 1400 aa29.13■■■□□ 2.25
CACNB3-205ENST00000547392 TRAPPC8Q9Y2L5 1435 aa29.12■■■□□ 2.25
CACNB3-205ENST00000547392 NLRP13Q86W25 1043 aa29.12■■■□□ 2.25
CACNB3-205ENST00000547392 OSCARQ8IYS5 282 aa29.09■■■□□ 2.25
CACNB3-205ENST00000547392 INSRP06213 1382 aa29.08■■■□□ 2.25
CACNB3-205ENST00000547392 DISP3Q9P2K9 1392 aa29.07■■■□□ 2.24
CACNB3-205ENST00000547392 ZMYM4Q5VZL5 1548 aa29.06■■■□□ 2.24
CACNB3-205ENST00000547392 ZFYVE16Q7Z3T8 1539 aa29.04■■■□□ 2.24
CACNB3-205ENST00000547392 DEPDC5O75140 1603 aa29.04■■■□□ 2.24
CACNB3-205ENST00000547392 TRPM2O94759 1503 aa29.04■■■□□ 2.24
CACNB3-205ENST00000547392 MADDQ8WXG6 1647 aa29.02■■■□□ 2.24
CACNB3-205ENST00000547392 TMF1P82094 1093 aa29.02■■■□□ 2.24
CACNB3-205ENST00000547392 STAC3Q96MF2 364 aa29.02■■■□□ 2.24
CACNB3-205ENST00000547392 MSH5O43196 834 aa29.01■■■□□ 2.24
CACNB3-205ENST00000547392 SPAG9O60271 1321 aaKnown RBP29.01■■■□□ 2.23
CACNB3-205ENST00000547392 PTPRTO14522 1441 aa29.01■■■□□ 2.23
CACNB3-205ENST00000547392 CEP152O94986 1710 aa29■■■□□ 2.23
CACNB3-205ENST00000547392 PDE3BQ13370 1112 aa29■■■□□ 2.23
CACNB3-205ENST00000547392 IQGAP1P46940 1657 aa28.99■■■□□ 2.23
CACNB3-205ENST00000547392 SPHKAPQ2M3C7 1700 aa28.99■■■□□ 2.23
CACNB3-205ENST00000547392 TET3O43151 1660 aa28.97■■■□□ 2.23
CACNB3-205ENST00000547392 ABCA9Q8IUA7 1624 aa28.95■■■□□ 2.23
CACNB3-205ENST00000547392 VWDEQ8N2E2 1590 aa28.95■■■□□ 2.22
CACNB3-205ENST00000547392 PANK3Q9H999 370 aa28.94■■■□□ 2.22
CACNB3-205ENST00000547392 INO80Q9ULG1 1556 aaPredicted RBP28.94■■■□□ 2.22
CACNB3-205ENST00000547392 SCAPERQ9BY12 1400 aa28.94■■■□□ 2.22
CACNB3-205ENST00000547392 NEURL4Q96JN8 1562 aa28.93■■■□□ 2.22
CACNB3-205ENST00000547392 WDR7Q9Y4E6 1490 aa28.92■■■□□ 2.22
CACNB3-205ENST00000547392 BLMP54132 1417 aaPredicted RBP28.92■■■□□ 2.22
CACNB3-205ENST00000547392 CLTCL1P53675 1640 aa28.92■■■□□ 2.22
CACNB3-205ENST00000547392 CCDC136Q96JN2 1154 aa28.91■■■□□ 2.22
CACNB3-205ENST00000547392 ATP7AQ04656 1500 aa28.9■■■□□ 2.22
CACNB3-205ENST00000547392 AFAP1Q8N556 730 aa28.9■■■□□ 2.22
CACNB3-205ENST00000547392 KIAA1210Q9ULL0 1709 aa28.87■■■□□ 2.21
CACNB3-205ENST00000547392 RRP1P56182 461 aaKnown RBP28.87■■■□□ 2.21
CACNB3-205ENST00000547392 SCAF11Q99590 1463 aaKnown RBP28.87■■■□□ 2.21
CACNB3-205ENST00000547392 SENP3-EIF4A1A0A087X0R7 540 aa28.86■■■□□ 2.21
CACNB3-205ENST00000547392 CC2D1BQ5T0F9 858 aaKnown RBP28.86■■■□□ 2.21
CACNB3-205ENST00000547392 FANCAO15360 1455 aa28.85■■■□□ 2.21
CACNB3-205ENST00000547392 KANK1Q14678 1352 aa28.85■■■□□ 2.21
CACNB3-205ENST00000547392 RCAN3Q9UKA8 241 aa28.84■■■□□ 2.21
CACNB3-205ENST00000547392 SYNMO15061 1565 aa28.84■■■□□ 2.21
CACNB3-205ENST00000547392 CDCA8Q53HL2 280 aa28.82■■■□□ 2.2
CACNB3-205ENST00000547392 ASXL2Q76L83 1435 aa28.79■■■□□ 2.2
CACNB3-205ENST00000547392 MROH1Q8NDA8 1641 aa28.78■■■□□ 2.2
CACNB3-205ENST00000547392 ADGRL1O94910 1474 aa28.76■■■□□ 2.19
CACNB3-205ENST00000547392 MYOM2P54296 1465 aa28.74■■■□□ 2.19
CACNB3-205ENST00000547392 EIF3AQ14152 1382 aaKnown RBP28.74■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms