RNA–Protein interactions for RNA: ENST00000547019.1

R3HDM2-210, Transcript of R3H domain containing 2, humanhuman

TSL 3

Gene R3HDM2, Length 595 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM2-210ENST00000547019 GGT6Q6P531 493 aa16.29■□□□□ 0.2
R3HDM2-210ENST00000547019 SYNMO15061 1565 aa16.29■□□□□ 0.2
R3HDM2-210ENST00000547019 CCDC18Q5T9S5 1454 aa16.29■□□□□ 0.2
R3HDM2-210ENST00000547019 HNRNPMP52272 730 aaKnown RBP eCLIP16.28■□□□□ 0.2
R3HDM2-210ENST00000547019 LRRC7Q96NW7 1537 aa16.28■□□□□ 0.2
R3HDM2-210ENST00000547019 ZNF777Q9ULD5 760 aaPredicted RBP16.27■□□□□ 0.2
R3HDM2-210ENST00000547019 MED14O60244 1454 aa16.27■□□□□ 0.19
R3HDM2-210ENST00000547019 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.26■□□□□ 0.19
R3HDM2-210ENST00000547019 ZC3H13Q5T200 1668 aaKnown RBP16.26■□□□□ 0.19
R3HDM2-210ENST00000547019 FBXO31Q5XUX0 539 aaPredicted RBP16.25■□□□□ 0.19
R3HDM2-210ENST00000547019 CASKIN1Q8WXD9 1431 aa16.25■□□□□ 0.19
R3HDM2-210ENST00000547019 TNRQ92752 1358 aa16.25■□□□□ 0.19
R3HDM2-210ENST00000547019 PZPP20742 1482 aa16.24■□□□□ 0.19
R3HDM2-210ENST00000547019 NPHP4O75161 1426 aaPredicted RBP16.24■□□□□ 0.19
R3HDM2-210ENST00000547019 KIAA1107Q9UPP5 1409 aa16.24■□□□□ 0.19
R3HDM2-210ENST00000547019 KDM5DQ9BY66 1539 aa16.23■□□□□ 0.19
R3HDM2-210ENST00000547019 UGGT1Q9NYU2 1555 aa16.22■□□□□ 0.19
R3HDM2-210ENST00000547019 UBTFP17480 764 aaKnown RBP16.21■□□□□ 0.19
R3HDM2-210ENST00000547019 PLEKHH2Q8IVE3 1493 aa16.19■□□□□ 0.18
R3HDM2-210ENST00000547019 POTEAQ6S8J7 498 aa16.19■□□□□ 0.18
R3HDM2-210ENST00000547019 FYCO1Q9BQS8 1478 aa16.18■□□□□ 0.18
R3HDM2-210ENST00000547019 TIAM1Q13009 1591 aa16.17■□□□□ 0.18
R3HDM2-210ENST00000547019 NLRP1Q9C000 1473 aa16.17■□□□□ 0.18
R3HDM2-210ENST00000547019 MBD5Q9P267 1494 aa16.17■□□□□ 0.18
R3HDM2-210ENST00000547019 FAM135AQ9P2D6 1515 aa16.16■□□□□ 0.18
R3HDM2-210ENST00000547019 ANKLE2Q86XL3 938 aa16.16■□□□□ 0.18
R3HDM2-210ENST00000547019 MIA2Q96PC5 1412 aa16.15■□□□□ 0.18
R3HDM2-210ENST00000547019 ZNF644Q9H582 1327 aaPredicted RBP16.15■□□□□ 0.18
R3HDM2-210ENST00000547019 UBR1Q8IWV7 1749 aa16.14■□□□□ 0.17
R3HDM2-210ENST00000547019 DHX29Q7Z478 1369 aaKnown RBP16.13■□□□□ 0.17
R3HDM2-210ENST00000547019 CFDP1Q9UEE9 299 aaPredicted RBP16.12■□□□□ 0.17
R3HDM2-210ENST00000547019 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
R3HDM2-210ENST00000547019 RTEL1-TNFRSF6BF6WH68 1400 aa16.11■□□□□ 0.17
R3HDM2-210ENST00000547019 THEMISQ8N1K5 641 aaPredicted RBP16.1■□□□□ 0.17
R3HDM2-210ENST00000547019 CCNB3Q8WWL7 1395 aa16.1■□□□□ 0.17
R3HDM2-210ENST00000547019 CFAP65Q6ZU64 1925 aaKnown RBP16.09■□□□□ 0.17
R3HDM2-210ENST00000547019 KIF3BO15066 747 aa16.08■□□□□ 0.16
R3HDM2-210ENST00000547019 NCOA2Q15596 1464 aa16.07■□□□□ 0.16
R3HDM2-210ENST00000547019 CEP152O94986 1710 aa16.07■□□□□ 0.16
R3HDM2-210ENST00000547019 MROH1Q8NDA8 1641 aa16.06■□□□□ 0.16
R3HDM2-210ENST00000547019 ABCC3O15438 1527 aa16.06■□□□□ 0.16
R3HDM2-210ENST00000547019 MAP3K1Q13233 1512 aa16.05■□□□□ 0.16
R3HDM2-210ENST00000547019 ERVK-7P63135 1459 aa16.05■□□□□ 0.16
R3HDM2-210ENST00000547019 SCAF11Q99590 1463 aaKnown RBP16.04■□□□□ 0.16
R3HDM2-210ENST00000547019 FAM135BQ49AJ0 1406 aa16.04■□□□□ 0.16
R3HDM2-210ENST00000547019 WASHC2CQ9Y4E1 1318 aa16.04■□□□□ 0.16
R3HDM2-210ENST00000547019 CCDC141Q6ZP82 1450 aa16.03■□□□□ 0.16
R3HDM2-210ENST00000547019 ARHGAP23Q9P227 1491 aa16.03■□□□□ 0.16
R3HDM2-210ENST00000547019 SLIT1O75093 1534 aa16.02■□□□□ 0.15
R3HDM2-210ENST00000547019 PHLPP1O60346 1717 aa16.01■□□□□ 0.15
R3HDM2-210ENST00000547019 CAMSAP2Q08AD1 1489 aa16.01■□□□□ 0.15
R3HDM2-210ENST00000547019 EHBP1L1Q8N3D4 1523 aa16■□□□□ 0.15
R3HDM2-210ENST00000547019 LTKP29376 864 aa16■□□□□ 0.15
R3HDM2-210ENST00000547019 MTUS2Q5JR59 1369 aa15.99■□□□□ 0.15
R3HDM2-210ENST00000547019 SRCAPQ6ZRS2 3230 aa15.98■□□□□ 0.15
R3HDM2-210ENST00000547019 LRP6O75581 1613 aa15.97■□□□□ 0.15
R3HDM2-210ENST00000547019 PIK3C2BO00750 1634 aa15.97■□□□□ 0.15
R3HDM2-210ENST00000547019 COL16A1Q07092 1604 aaPredicted RBP15.97■□□□□ 0.15
R3HDM2-210ENST00000547019 ARHGEF5Q12774 1597 aa15.96■□□□□ 0.15
R3HDM2-210ENST00000547019 EIF2AK4Q9P2K8 1649 aaKnown RBP15.96■□□□□ 0.15
R3HDM2-210ENST00000547019 UPF1Q92900 1129 aaKnown RBP eCLIP15.95■□□□□ 0.14
R3HDM2-210ENST00000547019 TMEM94Q12767 1356 aa15.95■□□□□ 0.14
R3HDM2-210ENST00000547019 CEP162Q5TB80 1403 aa15.94■□□□□ 0.14
R3HDM2-210ENST00000547019 NWD1Q149M9 1564 aa15.93■□□□□ 0.14
R3HDM2-210ENST00000547019 RBM33Q96EV2 1170 aaKnown RBP15.93■□□□□ 0.14
R3HDM2-210ENST00000547019 LRRC9Q6ZRR7 1453 aa15.91■□□□□ 0.14
R3HDM2-210ENST00000547019 TET3O43151 1660 aa15.91■□□□□ 0.14
R3HDM2-210ENST00000547019 MAST1Q9Y2H9 1570 aa15.91■□□□□ 0.14
R3HDM2-210ENST00000547019 PRDM15P57071 1507 aaPredicted RBP15.9■□□□□ 0.14
R3HDM2-210ENST00000547019 TXNDC2Q86VQ3 553 aa15.89■□□□□ 0.13
R3HDM2-210ENST00000547019 KDM5AP29375 1690 aaKnown RBP15.88■□□□□ 0.13
R3HDM2-210ENST00000547019 SHPRHQ149N8 1683 aa15.87■□□□□ 0.13
R3HDM2-210ENST00000547019 JCADQ9P266 1359 aa15.87■□□□□ 0.13
R3HDM2-210ENST00000547019 NKTRP30414 1462 aaKnown RBP15.86■□□□□ 0.13
R3HDM2-210ENST00000547019 TMEM2Q9UHN6 1383 aa15.86■□□□□ 0.13
R3HDM2-210ENST00000547019 TRIM52Q96A61 297 aa15.85■□□□□ 0.13
R3HDM2-210ENST00000547019 EFCAB6Q5THR3 1501 aa15.84■□□□□ 0.13
R3HDM2-210ENST00000547019 CHD2O14647 1828 aaKnown RBP15.83■□□□□ 0.12
R3HDM2-210ENST00000547019 KCNA6P17658 529 aa15.82■□□□□ 0.12
R3HDM2-210ENST00000547019 ARHGAP31Q2M1Z3 1444 aa15.82■□□□□ 0.12
R3HDM2-210ENST00000547019 MYO5BQ9ULV0 1848 aa15.82■□□□□ 0.12
R3HDM2-210ENST00000547019 DIP2AQ14689 1571 aa15.81■□□□□ 0.12
R3HDM2-210ENST00000547019 AHDC1Q5TGY3 1603 aaPredicted RBP15.81■□□□□ 0.12
R3HDM2-210ENST00000547019 SLC26A8Q96RN1 970 aa15.81■□□□□ 0.12
R3HDM2-210ENST00000547019 PROSER2Q86WR7 435 aaPredicted RBP15.8■□□□□ 0.12
R3HDM2-210ENST00000547019 RSPH4AQ5TD94 716 aa15.79■□□□□ 0.12
R3HDM2-210ENST00000547019 EID1Q9Y6B2 187 aa15.79■□□□□ 0.12
R3HDM2-210ENST00000547019 CDK12Q9NYV4 1490 aaPredicted RBP15.78■□□□□ 0.12
R3HDM2-210ENST00000547019 FGD6Q6ZV73 1430 aa15.78■□□□□ 0.12
R3HDM2-210ENST00000547019 MSH6P52701 1360 aa15.78■□□□□ 0.12
R3HDM2-210ENST00000547019 SLAIN2Q9P270 581 aa15.78■□□□□ 0.12
R3HDM2-210ENST00000547019 CROCC2H7BZ55 1655 aa15.78■□□□□ 0.12
R3HDM2-210ENST00000547019 ADGRB3O60242 1522 aa15.78■□□□□ 0.12
R3HDM2-210ENST00000547019 DUOX2Q9NRD8 1548 aa15.78■□□□□ 0.12
R3HDM2-210ENST00000547019 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.77■□□□□ 0.12
R3HDM2-210ENST00000547019 SPATA31A6Q5VVP1 1343 aa15.76■□□□□ 0.11
R3HDM2-210ENST00000547019 RGS12O14924 1447 aa15.76■□□□□ 0.11
R3HDM2-210ENST00000547019 TSPY4P0CV99 314 aa15.75■□□□□ 0.11
R3HDM2-210ENST00000547019 TSPY10P0CW01 314 aa15.75■□□□□ 0.11
R3HDM2-210ENST00000547019 ZNF772Q68DY9 489 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms