RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 RRP7BPQ9NSQ0 103 aa16.74■□□□□ 0.27
TROAP-204ENST00000546776 PPP6R1Q9UPN7 881 aa16.74■□□□□ 0.27
TROAP-204ENST00000546776 KIF15Q9NS87 1388 aa16.74■□□□□ 0.27
TROAP-204ENST00000546776 NAIPQ13075 1403 aa16.73■□□□□ 0.27
TROAP-204ENST00000546776 GGT6Q6P531 493 aa16.73■□□□□ 0.27
TROAP-204ENST00000546776 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
TROAP-204ENST00000546776 DUOX2Q9NRD8 1548 aa16.72■□□□□ 0.27
TROAP-204ENST00000546776 KIF3BO15066 747 aa16.71■□□□□ 0.27
TROAP-204ENST00000546776 ANKRD50Q9ULJ7 1429 aa16.69■□□□□ 0.26
TROAP-204ENST00000546776 RAB3GAP2Q9H2M9 1393 aa16.68■□□□□ 0.26
TROAP-204ENST00000546776 HRCP23327 699 aa16.68■□□□□ 0.26
TROAP-204ENST00000546776 ERBINQ96RT1 1412 aa16.68■□□□□ 0.26
TROAP-204ENST00000546776 CEBPAP49715 358 aaPredicted RBP16.67■□□□□ 0.26
TROAP-204ENST00000546776 EIF2AK4Q9P2K8 1649 aaKnown RBP16.65■□□□□ 0.26
TROAP-204ENST00000546776 ZMYM3Q14202 1370 aa16.64■□□□□ 0.25
TROAP-204ENST00000546776 WASHC2CQ9Y4E1 1318 aa16.63■□□□□ 0.25
TROAP-204ENST00000546776 MROH2AA6NES4 1674 aa16.62■□□□□ 0.25
TROAP-204ENST00000546776 FAM135AQ9P2D6 1515 aa16.62■□□□□ 0.25
TROAP-204ENST00000546776 C3P01024 1663 aa16.6■□□□□ 0.25
TROAP-204ENST00000546776 NPATQ14207 1427 aa16.6■□□□□ 0.25
TROAP-204ENST00000546776 UHRF1BP1Q6BDS2 1440 aa16.6■□□□□ 0.25
TROAP-204ENST00000546776 LMTK3Q96Q04 1460 aa16.6■□□□□ 0.25
TROAP-204ENST00000546776 CLTCQ00610 1675 aaKnown RBP16.59■□□□□ 0.25
TROAP-204ENST00000546776 KDM5DQ9BY66 1539 aa16.59■□□□□ 0.25
TROAP-204ENST00000546776 TRIM52Q96A61 297 aa16.58■□□□□ 0.24
TROAP-204ENST00000546776 UNC13BO14795 1591 aa16.58■□□□□ 0.24
TROAP-204ENST00000546776 SETD1BQ9UPS6 1966 aaKnown RBP16.57■□□□□ 0.24
TROAP-204ENST00000546776 PREX1Q8TCU6 1659 aa16.57■□□□□ 0.24
TROAP-204ENST00000546776 DEPDC5O75140 1603 aa16.56■□□□□ 0.24
TROAP-204ENST00000546776 RNF17Q9BXT8 1623 aaKnown RBP16.56■□□□□ 0.24
TROAP-204ENST00000546776 KANK1Q14678 1352 aa16.55■□□□□ 0.24
TROAP-204ENST00000546776 HSPA2P54652 639 aa16.54■□□□□ 0.24
TROAP-204ENST00000546776 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.53■□□□□ 0.243e-6■■■■□ 20.1
TROAP-204ENST00000546776 NUP155O75694 1391 aa16.52■□□□□ 0.24
TROAP-204ENST00000546776 IQGAP3Q86VI3 1631 aa16.52■□□□□ 0.23
TROAP-204ENST00000546776 PRDM15P57071 1507 aaPredicted RBP16.51■□□□□ 0.23
TROAP-204ENST00000546776 ZC3H13Q5T200 1668 aaKnown RBP16.51■□□□□ 0.23
TROAP-204ENST00000546776 PZPP20742 1482 aa16.51■□□□□ 0.23
TROAP-204ENST00000546776 ABCC3O15438 1527 aa16.5■□□□□ 0.23
TROAP-204ENST00000546776 TNRQ92752 1358 aa16.49■□□□□ 0.23
TROAP-204ENST00000546776 CCER1Q8TC90 406 aaPredicted RBP16.48■□□□□ 0.23
TROAP-204ENST00000546776 SLC4A1APQ9BWU0 796 aaKnown RBP16.48■□□□□ 0.23
TROAP-204ENST00000546776 DMRT2Q9Y5R5 561 aa16.48■□□□□ 0.23
TROAP-204ENST00000546776 DHX57Q6P158 1386 aaKnown RBP16.48■□□□□ 0.23
TROAP-204ENST00000546776 MROH1Q8NDA8 1641 aa16.48■□□□□ 0.23
TROAP-204ENST00000546776 FBXO31Q5XUX0 539 aaPredicted RBP16.47■□□□□ 0.23
TROAP-204ENST00000546776 MPHOSPH9Q99550 1183 aa16.47■□□□□ 0.23
TROAP-204ENST00000546776 VWDEQ8N2E2 1590 aa16.46■□□□□ 0.23
TROAP-204ENST00000546776 TET3O43151 1660 aa16.45■□□□□ 0.22
TROAP-204ENST00000546776 CEP152O94986 1710 aa16.44■□□□□ 0.22
TROAP-204ENST00000546776 MYO3AQ8NEV4 1616 aa16.44■□□□□ 0.22
TROAP-204ENST00000546776 CLSPNQ9HAW4 1339 aa16.44■□□□□ 0.22
TROAP-204ENST00000546776 LMTK2Q8IWU2 1503 aa16.43■□□□□ 0.22
TROAP-204ENST00000546776 ARHGAP31Q2M1Z3 1444 aa16.43■□□□□ 0.22
TROAP-204ENST00000546776 NLRP1Q9C000 1473 aa16.42■□□□□ 0.22
TROAP-204ENST00000546776 CAMSAP1Q5T5Y3 1602 aa16.42■□□□□ 0.22
TROAP-204ENST00000546776 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
TROAP-204ENST00000546776 A2ML1A8K2U0 1454 aa16.42■□□□□ 0.22
TROAP-204ENST00000546776 PKD2Q13563 968 aa16.4■□□□□ 0.22
TROAP-204ENST00000546776 THEMISQ8N1K5 641 aaPredicted RBP16.4■□□□□ 0.22
TROAP-204ENST00000546776 ERVK-7P63135 1459 aa16.4■□□□□ 0.22
TROAP-204ENST00000546776 ZNF142P52746 1687 aaPredicted RBP16.4■□□□□ 0.22
TROAP-204ENST00000546776 EFCAB6Q5THR3 1501 aa16.4■□□□□ 0.22
TROAP-204ENST00000546776 SPATA31D1Q6ZQQ2 1576 aa16.38■□□□□ 0.21
TROAP-204ENST00000546776 E9PCH4 1651 aa16.38■□□□□ 0.21
TROAP-204ENST00000546776 PLA2R1Q13018 1463 aa16.37■□□□□ 0.21
TROAP-204ENST00000546776 RPRD2Q5VT52 1461 aaKnown RBP16.37■□□□□ 0.21
TROAP-204ENST00000546776 PTPRTO14522 1441 aa16.36■□□□□ 0.21
TROAP-204ENST00000546776 UGGT1Q9NYU2 1555 aa16.34■□□□□ 0.21
TROAP-204ENST00000546776 SPHKAPQ2M3C7 1700 aa16.34■□□□□ 0.21
TROAP-204ENST00000546776 STAG3Q9UJ98 1225 aa16.34■□□□□ 0.21
TROAP-204ENST00000546776 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
TROAP-204ENST00000546776 ANKLE2Q86XL3 938 aa16.33■□□□□ 0.2
TROAP-204ENST00000546776 STRCQ7RTU9 1775 aa16.33■□□□□ 0.2
TROAP-204ENST00000546776 FOXD1Q16676 465 aa16.32■□□□□ 0.2
TROAP-204ENST00000546776 SLC52A1Q9NWF4 448 aa16.32■□□□□ 0.2
TROAP-204ENST00000546776 ANKRD30BQ9BXX2 1392 aa16.31■□□□□ 0.2
TROAP-204ENST00000546776 CFAP65Q6ZU64 1925 aaKnown RBP16.31■□□□□ 0.2
TROAP-204ENST00000546776 TRPM2O94759 1503 aa16.29■□□□□ 0.2
TROAP-204ENST00000546776 NOS1P29475 1434 aa16.28■□□□□ 0.2
TROAP-204ENST00000546776 ZEB1P37275 1124 aaPredicted RBP16.28■□□□□ 0.2
TROAP-204ENST00000546776 EID1Q9Y6B2 187 aa16.28■□□□□ 0.2
TROAP-204ENST00000546776 CCDC144AA2RUR9 1427 aa16.28■□□□□ 0.2
TROAP-204ENST00000546776 IDI1Q13907 227 aa16.27■□□□□ 0.2
TROAP-204ENST00000546776 NEUROD1Q13562 356 aa16.24■□□□□ 0.19
TROAP-204ENST00000546776 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
TROAP-204ENST00000546776 HDGFP51858 240 aaKnown RBP16.23■□□□□ 0.19
TROAP-204ENST00000546776 TXNDC2Q86VQ3 553 aa16.23■□□□□ 0.19
TROAP-204ENST00000546776 CERKQ8TCT0 537 aa16.23■□□□□ 0.19
TROAP-204ENST00000546776 SIN3AQ96ST3 1273 aa16.23■□□□□ 0.19
TROAP-204ENST00000546776 TIMELESSQ9UNS1 1208 aa16.23■□□□□ 0.19
TROAP-204ENST00000546776 KIF1BO60333 1816 aa16.23■□□□□ 0.19
TROAP-204ENST00000546776 POLR1AO95602 1720 aaPredicted RBP16.22■□□□□ 0.19
TROAP-204ENST00000546776 SYNMO15061 1565 aa16.22■□□□□ 0.19
TROAP-204ENST00000546776 PIK3C2BO00750 1634 aa16.22■□□□□ 0.19
TROAP-204ENST00000546776 KDM5AP29375 1690 aaKnown RBP16.21■□□□□ 0.19
TROAP-204ENST00000546776 NPHP4O75161 1426 aaPredicted RBP16.21■□□□□ 0.19
TROAP-204ENST00000546776 CLTCL1P53675 1640 aa16.21■□□□□ 0.19
TROAP-204ENST00000546776 TONSLQ96HA7 1378 aa16.21■□□□□ 0.19
TROAP-204ENST00000546776 TMEM2Q9UHN6 1383 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms