RNA–Protein interactions for RNA: ENST00000546776.5

TROAP-204, Transcript of trophinin associated protein, humanhuman

TSL 3

Gene TROAP, Length 1,011 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-204ENST00000546776 NISCHQ9Y2I1 1504 aa26.28■■□□□ 1.8
TROAP-204ENST00000546776 CCDC180Q9P1Z9 1646 aa23.38■■□□□ 1.33
TROAP-204ENST00000546776 ABCC9O60706 1549 aa22.94■■□□□ 1.26
TROAP-204ENST00000546776 DCAF8L2P0C7V8 631 aa22.08■■□□□ 1.13
TROAP-204ENST00000546776 RB1CC1Q8TDY2 1594 aa22.08■■□□□ 1.12
TROAP-204ENST00000546776 NACADO15069 1562 aa22.04■■□□□ 1.12
TROAP-204ENST00000546776 ZCCHC6Q5VYS8 1495 aaKnown RBP21.91■■□□□ 1.1
TROAP-204ENST00000546776 MYO15BQ96JP2 1530 aa21.89■■□□□ 1.09
TROAP-204ENST00000546776 DCAF1Q9Y4B6 1507 aa21.75■■□□□ 1.07
TROAP-204ENST00000546776 PABPN1Q86U42 306 aaKnown RBP eCLIP21.45■■□□□ 1.02
TROAP-204ENST00000546776 UNC13AQ9UPW8 1703 aa21.44■■□□□ 1.02
TROAP-204ENST00000546776 SCRIBQ14160 1630 aa21.32■■□□□ 1
TROAP-204ENST00000546776 BICRAQ9NZM4 1560 aa21.31■■□□□ 1
TROAP-204ENST00000546776 SHROOM4Q9ULL8 1493 aa21.2■□□□□ 0.98
TROAP-204ENST00000546776 DNAJC5BQ9UF47 199 aa21.05■□□□□ 0.96
TROAP-204ENST00000546776 EIF4G1Q04637 1599 aaKnown RBP20.81■□□□□ 0.92
TROAP-204ENST00000546776 CC2D2AQ9P2K1 1620 aa20.73■□□□□ 0.91
TROAP-204ENST00000546776 CECR2Q9BXF3 1484 aa20.64■□□□□ 0.89
TROAP-204ENST00000546776 BAZ1AQ9NRL2 1556 aaPredicted RBP20.4■□□□□ 0.86
TROAP-204ENST00000546776 SMARCA4P51532 1647 aa20.38■□□□□ 0.85
TROAP-204ENST00000546776 NCAPD3P42695 1498 aa20.32■□□□□ 0.84
TROAP-204ENST00000546776 SMARCA2P51531 1590 aa20.32■□□□□ 0.84
TROAP-204ENST00000546776 ATAD2BQ9ULI0 1458 aa20.3■□□□□ 0.84
TROAP-204ENST00000546776 MROH2BQ7Z745 1585 aa20.21■□□□□ 0.83
TROAP-204ENST00000546776 HMGXB3Q12766 1538 aa20.21■□□□□ 0.83
TROAP-204ENST00000546776 PEG3Q9GZU2 1588 aa20.19■□□□□ 0.82
TROAP-204ENST00000546776 BAZ1BQ9UIG0 1483 aaKnown RBP20.18■□□□□ 0.82
TROAP-204ENST00000546776 RSF1Q96T23 1441 aaPredicted RBP20.1■□□□□ 0.81
TROAP-204ENST00000546776 WIZO95785 1651 aa20■□□□□ 0.79
TROAP-204ENST00000546776 SUPT5HO00267 1087 aaKnown RBP19.99■□□□□ 0.79
TROAP-204ENST00000546776 ERCC6Q03468 1493 aa19.85■□□□□ 0.77
TROAP-204ENST00000546776 TOP2AP11388 1531 aaKnown RBP19.83■□□□□ 0.77
TROAP-204ENST00000546776 LAMC3Q9Y6N6 1575 aa19.8■□□□□ 0.76
TROAP-204ENST00000546776 NESP48681 1621 aa19.79■□□□□ 0.76
TROAP-204ENST00000546776 CADPSQ9ULU8 1353 aa19.75■□□□□ 0.75
TROAP-204ENST00000546776 PDS5BQ9NTI5 1447 aa19.73■□□□□ 0.75
TROAP-204ENST00000546776 CUX2O14529 1486 aa19.63■□□□□ 0.73
TROAP-204ENST00000546776 CFTRP13569 1480 aa19.6■□□□□ 0.73
TROAP-204ENST00000546776 CCDC88BA6NC98 1476 aa19.58■□□□□ 0.72
TROAP-204ENST00000546776 KIF21AQ7Z4S6 1674 aa19.55■□□□□ 0.72
TROAP-204ENST00000546776 FANCD2Q9BXW9 1451 aa19.51■□□□□ 0.71
TROAP-204ENST00000546776 CEP164Q9UPV0 1460 aa19.51■□□□□ 0.71
TROAP-204ENST00000546776 THOC2Q8NI27 1593 aaKnown RBP19.5■□□□□ 0.71
TROAP-204ENST00000546776 MRC2Q9UBG0 1479 aa19.48■□□□□ 0.71
TROAP-204ENST00000546776 PRDM2Q13029 1718 aa19.39■□□□□ 0.7
TROAP-204ENST00000546776 WDR62O43379 1518 aa19.38■□□□□ 0.69
TROAP-204ENST00000546776 URB2Q14146 1524 aaKnown RBP19.27■□□□□ 0.68
TROAP-204ENST00000546776 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
TROAP-204ENST00000546776 TOPBP1Q92547 1522 aa19.17■□□□□ 0.66
TROAP-204ENST00000546776 DNMBPQ6XZF7 1577 aa19.15■□□□□ 0.66
TROAP-204ENST00000546776 IFT140Q96RY7 1462 aa19.1■□□□□ 0.65
TROAP-204ENST00000546776 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
TROAP-204ENST00000546776 POLA1P09884 1462 aaPredicted RBP18.99■□□□□ 0.63
TROAP-204ENST00000546776 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
TROAP-204ENST00000546776 CUX1P39880 1505 aa18.98■□□□□ 0.63
TROAP-204ENST00000546776 SOGA1O94964 1423 aa18.97■□□□□ 0.63
TROAP-204ENST00000546776 ZNF608Q9ULD9 1512 aaPredicted RBP18.95■□□□□ 0.62
TROAP-204ENST00000546776 FGD5Q6ZNL6 1462 aa18.95■□□□□ 0.62
TROAP-204ENST00000546776 CHIC1Q5VXU3 224 aa18.93■□□□□ 0.62
TROAP-204ENST00000546776 TARBP1Q13395 1621 aaKnown RBP18.92■□□□□ 0.62
TROAP-204ENST00000546776 BIVM-ERCC5R4GMW8 1640 aa18.91■□□□□ 0.62
TROAP-204ENST00000546776 RAD54L2Q9Y4B4 1467 aa18.9■□□□□ 0.62
TROAP-204ENST00000546776 TOP2BQ02880 1626 aa18.9■□□□□ 0.62
TROAP-204ENST00000546776 TRIM41Q8WV44 630 aa18.9■□□□□ 0.62
TROAP-204ENST00000546776 SYNJ1O43426 1573 aa18.89■□□□□ 0.62
TROAP-204ENST00000546776 EIF4G3O43432 1585 aaKnown RBP18.88■□□□□ 0.61
TROAP-204ENST00000546776 AQRO60306 1485 aaKnown RBP eCLIP18.87■□□□□ 0.612e-7■■■■□ 21.9
TROAP-204ENST00000546776 OSCARQ8IYS5 282 aa18.86■□□□□ 0.61
TROAP-204ENST00000546776 WDR97A6NE52 1622 aa18.85■□□□□ 0.61
TROAP-204ENST00000546776 TDRD9Q8NDG6 1382 aaKnown RBP18.84■□□□□ 0.61
TROAP-204ENST00000546776 ABCA10Q8WWZ4 1543 aa18.77■□□□□ 0.6
TROAP-204ENST00000546776 GRIN2BQ13224 1484 aa18.75■□□□□ 0.59
TROAP-204ENST00000546776 GAPVD1Q14C86 1478 aa18.74■□□□□ 0.59
TROAP-204ENST00000546776 FBLN2P98095 1184 aa18.74■□□□□ 0.59
TROAP-204ENST00000546776 MAGI1Q96QZ7 1491 aaPredicted RBP18.71■□□□□ 0.59
TROAP-204ENST00000546776 SNAPC4Q5SXM2 1469 aa18.71■□□□□ 0.59
TROAP-204ENST00000546776 CHMP7Q8WUX9 453 aaPredicted RBP18.7■□□□□ 0.58
TROAP-204ENST00000546776 ABCA5Q8WWZ7 1642 aa18.66■□□□□ 0.58
TROAP-204ENST00000546776 PBRM1Q86U86 1689 aa18.63■□□□□ 0.57
TROAP-204ENST00000546776 CHD1O14646 1710 aa18.63■□□□□ 0.57
TROAP-204ENST00000546776 SYNJ2O15056 1496 aa18.63■□□□□ 0.57
TROAP-204ENST00000546776 EEA1Q15075 1411 aa18.58■□□□□ 0.57
TROAP-204ENST00000546776 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
TROAP-204ENST00000546776 ERICH3Q5RHP9 1530 aa18.57■□□□□ 0.56
TROAP-204ENST00000546776 FHAD1B1AJZ9 1412 aa18.54■□□□□ 0.56
TROAP-204ENST00000546776 ADAMTS12P58397 1594 aa18.51■□□□□ 0.55
TROAP-204ENST00000546776 GRIN2AQ12879 1464 aa18.49■□□□□ 0.55
TROAP-204ENST00000546776 ARHGEF11O15085 1522 aa18.46■□□□□ 0.55
TROAP-204ENST00000546776 RUSC2Q8N2Y8 1516 aa18.46■□□□□ 0.55
TROAP-204ENST00000546776 RIMBP3CA6NJZ7 1639 aa18.45■□□□□ 0.54
TROAP-204ENST00000546776 RIMBP3BA6NNM3 1639 aa18.45■□□□□ 0.54
TROAP-204ENST00000546776 RIMBP3Q9UFD9 1639 aa18.45■□□□□ 0.54
TROAP-204ENST00000546776 CLASP1Q7Z460 1538 aa18.45■□□□□ 0.54
TROAP-204ENST00000546776 FAM9AQ8IZU1 332 aaPredicted RBP18.45■□□□□ 0.54
TROAP-204ENST00000546776 CSRNP3Q8WYN3 585 aa18.43■□□□□ 0.54
TROAP-204ENST00000546776 IGF1RP08069 1367 aa18.42■□□□□ 0.54
TROAP-204ENST00000546776 CUL7Q14999 1698 aa18.4■□□□□ 0.54
TROAP-204ENST00000546776 NUP160Q12769 1436 aa18.4■□□□□ 0.54
TROAP-204ENST00000546776 CYB5RLQ6IPT4 315 aa18.36■□□□□ 0.53
TROAP-204ENST00000546776 CEP170Q5SW79 1584 aa18.35■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms