RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 EIF2AK4Q9P2K8 1649 aaKnown RBP23.88■■□□□ 1.41
SCRIB-208ENST00000546337 ZMYM3Q14202 1370 aa23.88■■□□□ 1.41
SCRIB-208ENST00000546337 PTPRKQ15262 1439 aa23.86■■□□□ 1.41
SCRIB-208ENST00000546337 WASHC2CQ9Y4E1 1318 aa23.85■■□□□ 1.41
SCRIB-208ENST00000546337 MROH2AA6NES4 1674 aa23.83■■□□□ 1.4
SCRIB-208ENST00000546337 CEBPAP49715 358 aaPredicted RBP23.82■■□□□ 1.4
SCRIB-208ENST00000546337 ANKRD50Q9ULJ7 1429 aa23.82■■□□□ 1.4
SCRIB-208ENST00000546337 SETD1BQ9UPS6 1966 aaKnown RBP23.82■■□□□ 1.4
SCRIB-208ENST00000546337 RNF17Q9BXT8 1623 aaKnown RBP23.81■■□□□ 1.4
SCRIB-208ENST00000546337 NPATQ14207 1427 aa23.81■■□□□ 1.4
SCRIB-208ENST00000546337 KDM5DQ9BY66 1539 aa23.79■■□□□ 1.4
SCRIB-208ENST00000546337 KANK1Q14678 1352 aa23.78■■□□□ 1.4
SCRIB-208ENST00000546337 ITGAEP38570 1179 aa23.78■■□□□ 1.4
SCRIB-208ENST00000546337 PLPPR3Q6T4P5 718 aa23.73■■□□□ 1.39
SCRIB-208ENST00000546337 C3P01024 1663 aa23.73■■□□□ 1.39
SCRIB-208ENST00000546337 PRDM15P57071 1507 aaPredicted RBP23.72■■□□□ 1.39
SCRIB-208ENST00000546337 CLTCQ00610 1675 aaKnown RBP23.72■■□□□ 1.39
SCRIB-208ENST00000546337 ZC3H13Q5T200 1668 aaKnown RBP23.71■■□□□ 1.39
SCRIB-208ENST00000546337 PZPP20742 1482 aa23.71■■□□□ 1.39
SCRIB-208ENST00000546337 ARHGAP31Q2M1Z3 1444 aa23.71■■□□□ 1.39
SCRIB-208ENST00000546337 DEPDC5O75140 1603 aa23.7■■□□□ 1.39
SCRIB-208ENST00000546337 MROH1Q8NDA8 1641 aa23.7■■□□□ 1.39
SCRIB-208ENST00000546337 ABCC3O15438 1527 aa23.7■■□□□ 1.38
SCRIB-208ENST00000546337 UHRF1BP1Q6BDS2 1440 aa23.69■■□□□ 1.38
SCRIB-208ENST00000546337 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.69■■□□□ 1.38
SCRIB-208ENST00000546337 ACIN1Q9UKV3 1341 aaKnown RBP23.68■■□□□ 1.38
SCRIB-208ENST00000546337 LMTK2Q8IWU2 1503 aa23.68■■□□□ 1.38
SCRIB-208ENST00000546337 LMTK3Q96Q04 1460 aa23.67■■□□□ 1.38
SCRIB-208ENST00000546337 VWDEQ8N2E2 1590 aa23.66■■□□□ 1.38
SCRIB-208ENST00000546337 HFM1A2PYH4 1435 aa23.65■■□□□ 1.38
SCRIB-208ENST00000546337 NAIPQ13075 1403 aa23.64■■□□□ 1.37
SCRIB-208ENST00000546337 PREX1Q8TCU6 1659 aa23.64■■□□□ 1.37
SCRIB-208ENST00000546337 TNRQ92752 1358 aa23.63■■□□□ 1.37
SCRIB-208ENST00000546337 FBXO31Q5XUX0 539 aaPredicted RBP23.62■■□□□ 1.37
SCRIB-208ENST00000546337 NUP155O75694 1391 aa23.58■■□□□ 1.37
SCRIB-208ENST00000546337 UNC13BO14795 1591 aa23.57■■□□□ 1.36
SCRIB-208ENST00000546337 NLRP1Q9C000 1473 aa23.57■■□□□ 1.36
SCRIB-208ENST00000546337 RPRD2Q5VT52 1461 aaKnown RBP23.56■■□□□ 1.36
SCRIB-208ENST00000546337 SPATA31D1Q6ZQQ2 1576 aa23.56■■□□□ 1.36
SCRIB-208ENST00000546337 ERVK-7P63135 1459 aa23.56■■□□□ 1.36
SCRIB-208ENST00000546337 CAMSAP1Q5T5Y3 1602 aa23.55■■□□□ 1.36
SCRIB-208ENST00000546337 HSPA2P54652 639 aa23.54■■□□□ 1.36
SCRIB-208ENST00000546337 DMRT2Q9Y5R5 561 aa23.54■■□□□ 1.36
SCRIB-208ENST00000546337 A2ML1A8K2U0 1454 aa23.54■■□□□ 1.36
SCRIB-208ENST00000546337 CEP152O94986 1710 aa23.53■■□□□ 1.36
SCRIB-208ENST00000546337 THEMISQ8N1K5 641 aaPredicted RBP23.52■■□□□ 1.36
SCRIB-208ENST00000546337 GCC2Q8IWJ2 1684 aa23.51■■□□□ 1.35
SCRIB-208ENST00000546337 EFCAB6Q5THR3 1501 aa23.51■■□□□ 1.35
SCRIB-208ENST00000546337 SLC52A1Q9NWF4 448 aa23.51■■□□□ 1.35
SCRIB-208ENST00000546337 NOS1P29475 1434 aa23.5■■□□□ 1.35
SCRIB-208ENST00000546337 IQGAP3Q86VI3 1631 aa23.49■■□□□ 1.35
SCRIB-208ENST00000546337 TET3O43151 1660 aa23.48■■□□□ 1.35
SCRIB-208ENST00000546337 HRCP23327 699 aa23.48■■□□□ 1.35
SCRIB-208ENST00000546337 CEP170BQ9Y4F5 1589 aaPredicted RBP23.48■■□□□ 1.35
SCRIB-208ENST00000546337 PKD2Q13563 968 aa23.47■■□□□ 1.35
SCRIB-208ENST00000546337 PLA2R1Q13018 1463 aa23.47■■□□□ 1.35
SCRIB-208ENST00000546337 MYO3AQ8NEV4 1616 aa23.47■■□□□ 1.35
SCRIB-208ENST00000546337 ZNF142P52746 1687 aaPredicted RBP23.47■■□□□ 1.35
SCRIB-208ENST00000546337 SETD5Q9C0A6 1442 aa23.45■■□□□ 1.34
SCRIB-208ENST00000546337 TRIM52Q96A61 297 aa23.45■■□□□ 1.34
SCRIB-208ENST00000546337 IDI1Q13907 227 aa23.41■■□□□ 1.34
SCRIB-208ENST00000546337 UGGT1Q9NYU2 1555 aa23.4■■□□□ 1.34
SCRIB-208ENST00000546337 PTPRTO14522 1441 aa23.4■■□□□ 1.34
SCRIB-208ENST00000546337 ANKLE2Q86XL3 938 aa23.39■■□□□ 1.33
SCRIB-208ENST00000546337 SLC4A1APQ9BWU0 796 aaKnown RBP23.38■■□□□ 1.33
SCRIB-208ENST00000546337 CFAP65Q6ZU64 1925 aaKnown RBP23.37■■□□□ 1.33
SCRIB-208ENST00000546337 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
SCRIB-208ENST00000546337 E9PCH4 1651 aa23.33■■□□□ 1.33
SCRIB-208ENST00000546337 KDM5AP29375 1690 aaKnown RBP23.33■■□□□ 1.33
SCRIB-208ENST00000546337 SYNMO15061 1565 aa23.33■■□□□ 1.33
SCRIB-208ENST00000546337 HDGFP51858 240 aaKnown RBP23.33■■□□□ 1.33
SCRIB-208ENST00000546337 RAB3GAP2Q9H2M9 1393 aa23.32■■□□□ 1.32
SCRIB-208ENST00000546337 MPHOSPH9Q99550 1183 aa23.32■■□□□ 1.32
SCRIB-208ENST00000546337 NCKAP5LQ9HCH0 1330 aa23.32■■□□□ 1.32
SCRIB-208ENST00000546337 STRCQ7RTU9 1775 aa23.31■■□□□ 1.32
SCRIB-208ENST00000546337 EID1Q9Y6B2 187 aa23.3■■□□□ 1.32
SCRIB-208ENST00000546337 ARHGAP23Q9P227 1491 aa23.29■■□□□ 1.32
SCRIB-208ENST00000546337 SLIT1O75093 1534 aa23.28■■□□□ 1.32
SCRIB-208ENST00000546337 TMEM2Q9UHN6 1383 aa23.28■■□□□ 1.32
SCRIB-208ENST00000546337 MED14O60244 1454 aa23.28■■□□□ 1.32
SCRIB-208ENST00000546337 UBR1Q8IWV7 1749 aa23.27■■□□□ 1.32
SCRIB-208ENST00000546337 PIK3C2BO00750 1634 aa23.26■■□□□ 1.31
SCRIB-208ENST00000546337 TXNDC2Q86VQ3 553 aa23.25■■□□□ 1.31
SCRIB-208ENST00000546337 TRIM26Q12899 539 aaPredicted RBP23.24■■□□□ 1.31
SCRIB-208ENST00000546337 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.24■■□□□ 1.31
SCRIB-208ENST00000546337 ADGRB3O60242 1522 aa23.23■■□□□ 1.31
SCRIB-208ENST00000546337 TRPM2O94759 1503 aa23.22■■□□□ 1.31
SCRIB-208ENST00000546337 LTKP29376 864 aa23.21■■□□□ 1.31
SCRIB-208ENST00000546337 NPHP4O75161 1426 aaPredicted RBP23.21■■□□□ 1.31
SCRIB-208ENST00000546337 SCAF11Q99590 1463 aaKnown RBP23.21■■□□□ 1.31
SCRIB-208ENST00000546337 SPHKAPQ2M3C7 1700 aa23.19■■□□□ 1.3
SCRIB-208ENST00000546337 CHGAP10645 457 aaKnown RBP23.19■■□□□ 1.3
SCRIB-208ENST00000546337 TMEM131LA2VDJ0 1609 aa23.18■■□□□ 1.3
SCRIB-208ENST00000546337 NEURL4Q96JN8 1562 aa23.16■■□□□ 1.3
SCRIB-208ENST00000546337 POLR1AO95602 1720 aaPredicted RBP23.16■■□□□ 1.3
SCRIB-208ENST00000546337 ZFYVE9O95405 1425 aa23.15■■□□□ 1.3
SCRIB-208ENST00000546337 RPGRIP1LQ68CZ1 1315 aa23.14■■□□□ 1.3
SCRIB-208ENST00000546337 RIMS2Q9UQ26 1411 aa23.14■■□□□ 1.29
SCRIB-208ENST00000546337 CCDC144AA2RUR9 1427 aa23.12■■□□□ 1.29
SCRIB-208ENST00000546337 FOXD1Q16676 465 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms