RNA–Protein interactions for RNA: ENST00000546337.1

SCRIB-208, Transcript of scribbled planar cell polarity protein, humanhuman

TSL 3

Gene SCRIB, Length 516 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRIB-208ENST00000546337 NISCHQ9Y2I1 1504 aa37.87■■■■□ 3.65
SCRIB-208ENST00000546337 CCDC180Q9P1Z9 1646 aa33.6■■■□□ 2.97
SCRIB-208ENST00000546337 ABCC9O60706 1549 aa32.72■■■□□ 2.83
SCRIB-208ENST00000546337 NACADO15069 1562 aa31.65■■■□□ 2.66
SCRIB-208ENST00000546337 RB1CC1Q8TDY2 1594 aa31.62■■■□□ 2.65
SCRIB-208ENST00000546337 MYO15BQ96JP2 1530 aa31.59■■■□□ 2.65
SCRIB-208ENST00000546337 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
SCRIB-208ENST00000546337 ZCCHC6Q5VYS8 1495 aaKnown RBP31.54■■■□□ 2.64
SCRIB-208ENST00000546337 DCAF1Q9Y4B6 1507 aa31.45■■■□□ 2.63
SCRIB-208ENST00000546337 UNC13AQ9UPW8 1703 aa30.67■■■□□ 2.5
SCRIB-208ENST00000546337 PABPN1Q86U42 306 aaKnown RBP eCLIP30.62■■■□□ 2.494e-7■■□□□ 14.5
SCRIB-208ENST00000546337 BICRAQ9NZM4 1560 aa30.57■■■□□ 2.48
SCRIB-208ENST00000546337 SCRIBQ14160 1630 aa30.52■■■□□ 2.48
SCRIB-208ENST00000546337 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
SCRIB-208ENST00000546337 DNAJC5BQ9UF47 199 aa30■■■□□ 2.39
SCRIB-208ENST00000546337 EIF4G1Q04637 1599 aaKnown RBP29.78■■■□□ 2.36
SCRIB-208ENST00000546337 CC2D2AQ9P2K1 1620 aa29.6■■■□□ 2.33
SCRIB-208ENST00000546337 CECR2Q9BXF3 1484 aa29.47■■■□□ 2.31
SCRIB-208ENST00000546337 BAZ1AQ9NRL2 1556 aaPredicted RBP29.36■■■□□ 2.29
SCRIB-208ENST00000546337 SMARCA4P51532 1647 aa29.29■■■□□ 2.28
SCRIB-208ENST00000546337 NCAPD3P42695 1498 aa29.24■■■□□ 2.27
SCRIB-208ENST00000546337 SMARCA2P51531 1590 aa29.19■■■□□ 2.26
SCRIB-208ENST00000546337 ATAD2BQ9ULI0 1458 aa29.19■■■□□ 2.26
SCRIB-208ENST00000546337 MROH2BQ7Z745 1585 aa29.11■■■□□ 2.25
SCRIB-208ENST00000546337 PEG3Q9GZU2 1588 aa29.11■■■□□ 2.25
SCRIB-208ENST00000546337 HMGXB3Q12766 1538 aa29.04■■■□□ 2.24
SCRIB-208ENST00000546337 BAZ1BQ9UIG0 1483 aaKnown RBP28.93■■■□□ 2.22
SCRIB-208ENST00000546337 RSF1Q96T23 1441 aaPredicted RBP28.89■■■□□ 2.22
SCRIB-208ENST00000546337 WIZO95785 1651 aa28.72■■■□□ 2.19
SCRIB-208ENST00000546337 TOP2AP11388 1531 aaKnown RBP28.54■■■□□ 2.16
SCRIB-208ENST00000546337 LAMC3Q9Y6N6 1575 aa28.39■■■□□ 2.14
SCRIB-208ENST00000546337 CADPSQ9ULU8 1353 aa28.38■■■□□ 2.13
SCRIB-208ENST00000546337 NESP48681 1621 aa28.31■■■□□ 2.12
SCRIB-208ENST00000546337 PDS5BQ9NTI5 1447 aa28.27■■■□□ 2.12
SCRIB-208ENST00000546337 ERCC6Q03468 1493 aa28.26■■■□□ 2.11
SCRIB-208ENST00000546337 CCDC88BA6NC98 1476 aa28.21■■■□□ 2.11
SCRIB-208ENST00000546337 CFTRP13569 1480 aa28.21■■■□□ 2.11
SCRIB-208ENST00000546337 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
SCRIB-208ENST00000546337 CUX2O14529 1486 aa28.02■■■□□ 2.08
SCRIB-208ENST00000546337 FANCD2Q9BXW9 1451 aa27.97■■■□□ 2.07
SCRIB-208ENST00000546337 CEP164Q9UPV0 1460 aa27.93■■■□□ 2.06
SCRIB-208ENST00000546337 KIF21AQ7Z4S6 1674 aa27.91■■■□□ 2.06
SCRIB-208ENST00000546337 MRC2Q9UBG0 1479 aa27.88■■■□□ 2.05
SCRIB-208ENST00000546337 THOC2Q8NI27 1593 aaKnown RBP27.86■■■□□ 2.05
SCRIB-208ENST00000546337 PRDM2Q13029 1718 aa27.81■■■□□ 2.04
SCRIB-208ENST00000546337 WDR62O43379 1518 aa27.76■■■□□ 2.03
SCRIB-208ENST00000546337 ABCC8Q09428 1581 aa27.69■■■□□ 2.02
SCRIB-208ENST00000546337 URB2Q14146 1524 aaKnown RBP27.64■■■□□ 2.02
SCRIB-208ENST00000546337 TOPBP1Q92547 1522 aa27.51■■■□□ 2
SCRIB-208ENST00000546337 DNMBPQ6XZF7 1577 aa27.49■■□□□ 1.99
SCRIB-208ENST00000546337 IFT140Q96RY7 1462 aa27.41■■□□□ 1.98
SCRIB-208ENST00000546337 CUX1P39880 1505 aa27.3■■□□□ 1.96
SCRIB-208ENST00000546337 POLA1P09884 1462 aaPredicted RBP27.29■■□□□ 1.96
SCRIB-208ENST00000546337 SOGA1O94964 1423 aa27.24■■□□□ 1.95
SCRIB-208ENST00000546337 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
SCRIB-208ENST00000546337 FGD5Q6ZNL6 1462 aa27.21■■□□□ 1.95
SCRIB-208ENST00000546337 TARBP1Q13395 1621 aaKnown RBP27.18■■□□□ 1.94
SCRIB-208ENST00000546337 ZNF608Q9ULD9 1512 aaPredicted RBP27.14■■□□□ 1.94
SCRIB-208ENST00000546337 TOP2BQ02880 1626 aa27.13■■□□□ 1.93
SCRIB-208ENST00000546337 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
SCRIB-208ENST00000546337 WDR97A6NE52 1622 aa27.11■■□□□ 1.93
SCRIB-208ENST00000546337 DNAJC5Q9H3Z4 198 aa27.1■■□□□ 1.93
SCRIB-208ENST00000546337 BIVM-ERCC5R4GMW8 1640 aa27.08■■□□□ 1.93
SCRIB-208ENST00000546337 AQRO60306 1485 aaKnown RBP eCLIP27.04■■□□□ 1.923e-20■■■■■ 27.7
SCRIB-208ENST00000546337 ABCA10Q8WWZ4 1543 aa27.04■■□□□ 1.92
SCRIB-208ENST00000546337 SYNJ1O43426 1573 aa27.03■■□□□ 1.92
SCRIB-208ENST00000546337 TDRD9Q8NDG6 1382 aaKnown RBP27.03■■□□□ 1.92
SCRIB-208ENST00000546337 EIF4G3O43432 1585 aaKnown RBP27■■□□□ 1.91
SCRIB-208ENST00000546337 OSCARQ8IYS5 282 aa26.94■■□□□ 1.9
SCRIB-208ENST00000546337 GRIN2BQ13224 1484 aa26.93■■□□□ 1.9
SCRIB-208ENST00000546337 GAPVD1Q14C86 1478 aa26.9■■□□□ 1.9
SCRIB-208ENST00000546337 MAGI1Q96QZ7 1491 aaPredicted RBP26.85■■□□□ 1.89
SCRIB-208ENST00000546337 ABCA5Q8WWZ7 1642 aa26.81■■□□□ 1.88
SCRIB-208ENST00000546337 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
SCRIB-208ENST00000546337 CHMP7Q8WUX9 453 aaPredicted RBP26.76■■□□□ 1.87
SCRIB-208ENST00000546337 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
SCRIB-208ENST00000546337 FBLN2P98095 1184 aa26.72■■□□□ 1.87
SCRIB-208ENST00000546337 SYNJ2O15056 1496 aa26.72■■□□□ 1.87
SCRIB-208ENST00000546337 KIF27Q86VH2 1401 aa26.72■■□□□ 1.87
SCRIB-208ENST00000546337 TRIM41Q8WV44 630 aa26.69■■□□□ 1.86
SCRIB-208ENST00000546337 PBRM1Q86U86 1689 aa26.67■■□□□ 1.86
SCRIB-208ENST00000546337 FHAD1B1AJZ9 1412 aa26.65■■□□□ 1.86
SCRIB-208ENST00000546337 IGF1RP08069 1367 aa26.6■■□□□ 1.85
SCRIB-208ENST00000546337 CHD1O14646 1710 aa26.59■■□□□ 1.85
SCRIB-208ENST00000546337 ADAMTS12P58397 1594 aa26.54■■□□□ 1.84
SCRIB-208ENST00000546337 GRIN2AQ12879 1464 aa26.52■■□□□ 1.84
SCRIB-208ENST00000546337 NUP160Q12769 1436 aa26.45■■□□□ 1.82
SCRIB-208ENST00000546337 CARMIL1Q5VZK9 1371 aa26.44■■□□□ 1.82
SCRIB-208ENST00000546337 CUL7Q14999 1698 aa26.43■■□□□ 1.82
SCRIB-208ENST00000546337 CLASP1Q7Z460 1538 aa26.43■■□□□ 1.82
SCRIB-208ENST00000546337 CHIC1Q5VXU3 224 aa26.41■■□□□ 1.82
SCRIB-208ENST00000546337 ARHGEF11O15085 1522 aa26.34■■□□□ 1.81
SCRIB-208ENST00000546337 EEA1Q15075 1411 aa26.33■■□□□ 1.81
SCRIB-208ENST00000546337 RUSC2Q8N2Y8 1516 aa26.33■■□□□ 1.81
SCRIB-208ENST00000546337 CEP170Q5SW79 1584 aa26.3■■□□□ 1.8
SCRIB-208ENST00000546337 RAPGEF2Q9Y4G8 1499 aa26.27■■□□□ 1.8
SCRIB-208ENST00000546337 RIMBP3CA6NJZ7 1639 aa26.27■■□□□ 1.8
SCRIB-208ENST00000546337 RIMBP3BA6NNM3 1639 aa26.27■■□□□ 1.8
SCRIB-208ENST00000546337 RIMBP3Q9UFD9 1639 aa26.27■■□□□ 1.8
SCRIB-208ENST00000546337 CSRNP3Q8WYN3 585 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms