RNA–Protein interactions for RNA: ENST00000546039.5

PAAF1-216, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 805 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-216ENST00000546039 FAM135AQ9P2D6 1515 aa16.18■□□□□ 0.18
PAAF1-216ENST00000546039 CEP152O94986 1710 aa16.16■□□□□ 0.18
PAAF1-216ENST00000546039 SETD5Q9C0A6 1442 aa16.16■□□□□ 0.18
PAAF1-216ENST00000546039 ADAMTSL3P82987 1691 aa16.14■□□□□ 0.18
PAAF1-216ENST00000546039 IQGAP3Q86VI3 1631 aa16.14■□□□□ 0.17
PAAF1-216ENST00000546039 MROH2AA6NES4 1674 aa16.13■□□□□ 0.17
PAAF1-216ENST00000546039 KDM5DQ9BY66 1539 aa16.13■□□□□ 0.17
PAAF1-216ENST00000546039 ARID4BQ4LE39 1312 aaPredicted RBP16.13■□□□□ 0.17
PAAF1-216ENST00000546039 VWDEQ8N2E2 1590 aa16.13■□□□□ 0.17
PAAF1-216ENST00000546039 CLTCQ00610 1675 aaKnown RBP16.12■□□□□ 0.17
PAAF1-216ENST00000546039 KIF3BO15066 747 aa16.12■□□□□ 0.17
PAAF1-216ENST00000546039 MADDQ8WXG6 1647 aa16.11■□□□□ 0.17
PAAF1-216ENST00000546039 CAMSAP1Q5T5Y3 1602 aa16.1■□□□□ 0.17
PAAF1-216ENST00000546039 TET3O43151 1660 aa16.1■□□□□ 0.17
PAAF1-216ENST00000546039 RIMS1Q86UR5 1692 aaKnown RBP16.1■□□□□ 0.17
PAAF1-216ENST00000546039 ACIN1Q9UKV3 1341 aaKnown RBP16.1■□□□□ 0.17
PAAF1-216ENST00000546039 RAB3GAP2Q9H2M9 1393 aa16.1■□□□□ 0.17
PAAF1-216ENST00000546039 KANK1Q14678 1352 aa16.08■□□□□ 0.16
PAAF1-216ENST00000546039 ABCC3O15438 1527 aa16.08■□□□□ 0.16
PAAF1-216ENST00000546039 PCGF6Q9BYE7 350 aa16.07■□□□□ 0.16
PAAF1-216ENST00000546039 LMTK2Q8IWU2 1503 aa16.07■□□□□ 0.16
PAAF1-216ENST00000546039 CNTLNQ9NXG0 1405 aa16.06■□□□□ 0.16
PAAF1-216ENST00000546039 GGT6Q6P531 493 aa16.06■□□□□ 0.16
PAAF1-216ENST00000546039 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
PAAF1-216ENST00000546039 C3P01024 1663 aa16.05■□□□□ 0.16
PAAF1-216ENST00000546039 HRCP23327 699 aa16.05■□□□□ 0.16
PAAF1-216ENST00000546039 MLECQ14165 292 aa16.05■□□□□ 0.16
PAAF1-216ENST00000546039 CFAP65Q6ZU64 1925 aaKnown RBP16.05■□□□□ 0.16
PAAF1-216ENST00000546039 EFCAB6Q5THR3 1501 aa16.04■□□□□ 0.16
PAAF1-216ENST00000546039 E9PCH4 1651 aa16.03■□□□□ 0.16
PAAF1-216ENST00000546039 NUP155O75694 1391 aa16.02■□□□□ 0.16
PAAF1-216ENST00000546039 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.01■□□□□ 0.15
PAAF1-216ENST00000546039 PZPP20742 1482 aa16.01■□□□□ 0.15
PAAF1-216ENST00000546039 PREX1Q8TCU6 1659 aa16■□□□□ 0.15
PAAF1-216ENST00000546039 TRIM52Q96A61 297 aa16■□□□□ 0.15
PAAF1-216ENST00000546039 ESF1Q9H501 851 aaKnown RBP16■□□□□ 0.15
PAAF1-216ENST00000546039 SPHKAPQ2M3C7 1700 aa15.99■□□□□ 0.15
PAAF1-216ENST00000546039 WASHC2CQ9Y4E1 1318 aa15.99■□□□□ 0.15
PAAF1-216ENST00000546039 RPRD2Q5VT52 1461 aaKnown RBP15.98■□□□□ 0.15
PAAF1-216ENST00000546039 ARHGAP31Q2M1Z3 1444 aa15.97■□□□□ 0.15
PAAF1-216ENST00000546039 SETD1BQ9UPS6 1966 aaKnown RBP15.96■□□□□ 0.15
PAAF1-216ENST00000546039 NPATQ14207 1427 aa15.94■□□□□ 0.14
PAAF1-216ENST00000546039 PTPRMP28827 1452 aa15.94■□□□□ 0.14
PAAF1-216ENST00000546039 SPATA31D1Q6ZQQ2 1576 aa15.94■□□□□ 0.14
PAAF1-216ENST00000546039 ZMYM3Q14202 1370 aa15.93■□□□□ 0.14
PAAF1-216ENST00000546039 SLC4A1APQ9BWU0 796 aaKnown RBP15.93■□□□□ 0.14
PAAF1-216ENST00000546039 ERVK-7P63135 1459 aa15.91■□□□□ 0.14
PAAF1-216ENST00000546039 KDM4FA0A1W2PPD8 638 aa15.9■□□□□ 0.14
PAAF1-216ENST00000546039 MPHOSPH9Q99550 1183 aa15.9■□□□□ 0.14
PAAF1-216ENST00000546039 SYNMO15061 1565 aa15.9■□□□□ 0.14
PAAF1-216ENST00000546039 TRPM2O94759 1503 aa15.89■□□□□ 0.13
PAAF1-216ENST00000546039 PIK3C2BO00750 1634 aa15.89■□□□□ 0.13
PAAF1-216ENST00000546039 MYO3AQ8NEV4 1616 aa15.89■□□□□ 0.13
PAAF1-216ENST00000546039 KIF1BO60333 1816 aa15.89■□□□□ 0.13
PAAF1-216ENST00000546039 NOS1P29475 1434 aa15.88■□□□□ 0.13
PAAF1-216ENST00000546039 PKD2Q13563 968 aa15.88■□□□□ 0.13
PAAF1-216ENST00000546039 ZNF142P52746 1687 aaPredicted RBP15.88■□□□□ 0.13
PAAF1-216ENST00000546039 DHX57Q6P158 1386 aaKnown RBP15.87■□□□□ 0.13
PAAF1-216ENST00000546039 KDM5AP29375 1690 aaKnown RBP15.86■□□□□ 0.13
PAAF1-216ENST00000546039 PTPRTO14522 1441 aa15.85■□□□□ 0.13
PAAF1-216ENST00000546039 MYO5BQ9ULV0 1848 aa15.85■□□□□ 0.13
PAAF1-216ENST00000546039 CLTCL1P53675 1640 aa15.85■□□□□ 0.13
PAAF1-216ENST00000546039 TNRQ92752 1358 aa15.84■□□□□ 0.13
PAAF1-216ENST00000546039 CEBPAP49715 358 aaPredicted RBP15.83■□□□□ 0.12
PAAF1-216ENST00000546039 PLA2R1Q13018 1463 aa15.82■□□□□ 0.12
PAAF1-216ENST00000546039 NLRP1Q9C000 1473 aa15.82■□□□□ 0.12
PAAF1-216ENST00000546039 UBR1Q8IWV7 1749 aa15.82■□□□□ 0.12
PAAF1-216ENST00000546039 FBXO31Q5XUX0 539 aaPredicted RBP15.81■□□□□ 0.12
PAAF1-216ENST00000546039 UGGT1Q9NYU2 1555 aa15.81■□□□□ 0.12
PAAF1-216ENST00000546039 CEP170BQ9Y4F5 1589 aaPredicted RBP15.81■□□□□ 0.12
PAAF1-216ENST00000546039 ADGRB3O60242 1522 aa15.8■□□□□ 0.12
PAAF1-216ENST00000546039 PLPPR3Q6T4P5 718 aa15.8■□□□□ 0.12
PAAF1-216ENST00000546039 CCDC144AA2RUR9 1427 aa15.79■□□□□ 0.12
PAAF1-216ENST00000546039 ANKRD30BQ9BXX2 1392 aa15.79■□□□□ 0.12
PAAF1-216ENST00000546039 FOXD1Q16676 465 aa15.79■□□□□ 0.12
PAAF1-216ENST00000546039 TMEM131LA2VDJ0 1609 aa15.78■□□□□ 0.12
PAAF1-216ENST00000546039 A2ML1A8K2U0 1454 aa15.78■□□□□ 0.12
PAAF1-216ENST00000546039 UHRF1BP1Q6BDS2 1440 aa15.77■□□□□ 0.12
PAAF1-216ENST00000546039 NEURL4Q96JN8 1562 aa15.77■□□□□ 0.11
PAAF1-216ENST00000546039 SLC52A1Q9NWF4 448 aa15.76■□□□□ 0.11
PAAF1-216ENST00000546039 IFT172Q9UG01 1749 aa15.75■□□□□ 0.11
PAAF1-216ENST00000546039 CLSPNQ9HAW4 1339 aa15.74■□□□□ 0.11
PAAF1-216ENST00000546039 PPLO60437 1756 aa15.73■□□□□ 0.11
PAAF1-216ENST00000546039 POLR1AO95602 1720 aaPredicted RBP15.73■□□□□ 0.11
PAAF1-216ENST00000546039 IDI1Q13907 227 aa15.71■□□□□ 0.11
PAAF1-216ENST00000546039 CCER1Q8TC90 406 aaPredicted RBP15.71■□□□□ 0.11
PAAF1-216ENST00000546039 LMTK3Q96Q04 1460 aa15.71■□□□□ 0.1
PAAF1-216ENST00000546039 SPATA31E1Q6ZUB1 1445 aa15.68■□□□□ 0.1
PAAF1-216ENST00000546039 SLIT1O75093 1534 aa15.68■□□□□ 0.1
PAAF1-216ENST00000546039 STAG3Q9UJ98 1225 aa15.67■□□□□ 0.1
PAAF1-216ENST00000546039 NEXMIFQ5QGS0 1516 aa15.67■□□□□ 0.1
PAAF1-216ENST00000546039 ARHGAP23Q9P227 1491 aa15.65■□□□□ 0.1
PAAF1-216ENST00000546039 CHGAP10645 457 aaKnown RBP15.65■□□□□ 0.1
PAAF1-216ENST00000546039 THEMISQ8N1K5 641 aaPredicted RBP15.64■□□□□ 0.09
PAAF1-216ENST00000546039 AEBP2Q6ZN18 517 aaPredicted RBP15.63■□□□□ 0.09
PAAF1-216ENST00000546039 TMEM2Q9UHN6 1383 aa15.62■□□□□ 0.09
PAAF1-216ENST00000546039 STRCQ7RTU9 1775 aa15.62■□□□□ 0.09
PAAF1-216ENST00000546039 ZFYVE9O95405 1425 aa15.62■□□□□ 0.09
PAAF1-216ENST00000546039 SIN3AQ96ST3 1273 aa15.62■□□□□ 0.09
PAAF1-216ENST00000546039 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms