RNA–Protein interactions for RNA: ENST00000545625.5

RAB6A-210, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB6A, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-210ENST00000545625 DNAJC5Q9H3Z4 198 aa10.34□□□□□ -0.75
RAB6A-210ENST00000545625 MAGI3Q5TCQ9 1506 aa10.33□□□□□ -0.76
RAB6A-210ENST00000545625 CHIC2Q9UKJ5 165 aa10.32□□□□□ -0.76
RAB6A-210ENST00000545625 CIZ1Q9ULV3 898 aaPredicted RBP10.32□□□□□ -0.76
RAB6A-210ENST00000545625 FGD6Q6ZV73 1430 aa10.32□□□□□ -0.76
RAB6A-210ENST00000545625 UHRF1BP1LA0JNW5 1464 aa10.31□□□□□ -0.76
RAB6A-210ENST00000545625 ARHGEF11O15085 1522 aa10.3□□□□□ -0.76
RAB6A-210ENST00000545625 IER5LQ5T953 404 aa10.29□□□□□ -0.76
RAB6A-210ENST00000545625 MAMSTRQ6ZN01 415 aa10.29□□□□□ -0.76
RAB6A-210ENST00000545625 KIF14Q15058 1648 aa10.29□□□□□ -0.76
RAB6A-210ENST00000545625 MIA2Q96PC5 1412 aa10.28□□□□□ -0.76
RAB6A-210ENST00000545625 ZEB1P37275 1124 aaPredicted RBP10.28□□□□□ -0.76
RAB6A-210ENST00000545625 MYT1LQ9UL68 1186 aa10.28□□□□□ -0.76
RAB6A-210ENST00000545625 ZNF644Q9H582 1327 aaPredicted RBP10.28□□□□□ -0.76
RAB6A-210ENST00000545625 ZCCHC11Q5TAX3 1644 aaKnown RBP10.27□□□□□ -0.77
RAB6A-210ENST00000545625 TSPY4P0CV99 314 aa10.27□□□□□ -0.77
RAB6A-210ENST00000545625 TSPY10P0CW01 314 aa10.27□□□□□ -0.77
RAB6A-210ENST00000545625 CHRM1P11229 460 aaPredicted RBP10.27□□□□□ -0.77
RAB6A-210ENST00000545625 EFCAB2Q5VUJ9 269 aa10.27□□□□□ -0.77
RAB6A-210ENST00000545625 SCUBE2Q9NQ36 999 aa10.27□□□□□ -0.77
RAB6A-210ENST00000545625 KDM5BQ9UGL1 1544 aa10.27□□□□□ -0.77
RAB6A-210ENST00000545625 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.26□□□□□ -0.77
RAB6A-210ENST00000545625 ZNF467Q7Z7K2 595 aaPredicted RBP10.26□□□□□ -0.77
RAB6A-210ENST00000545625 RRP7BPQ9NSQ0 103 aa10.26□□□□□ -0.77
RAB6A-210ENST00000545625 PTPN23Q9H3S7 1636 aa10.25□□□□□ -0.77
RAB6A-210ENST00000545625 GPATCH8Q9UKJ3 1502 aaKnown RBP10.25□□□□□ -0.77
RAB6A-210ENST00000545625 HRCP23327 699 aa10.25□□□□□ -0.77
RAB6A-210ENST00000545625 HNRNPMP52272 730 aaKnown RBP eCLIP10.25□□□□□ -0.775e-8■■□□□ 12.5
RAB6A-210ENST00000545625 ADCY10Q96PN6 1610 aa10.25□□□□□ -0.77
RAB6A-210ENST00000545625 ASXL2Q76L83 1435 aa10.24□□□□□ -0.77
RAB6A-210ENST00000545625 TRIM52Q96A61 297 aa10.24□□□□□ -0.77
RAB6A-210ENST00000545625 WDR7Q9Y4E6 1490 aa10.23□□□□□ -0.77
RAB6A-210ENST00000545625 RIMBP3CA6NJZ7 1639 aa10.23□□□□□ -0.77
RAB6A-210ENST00000545625 RIMBP3BA6NNM3 1639 aa10.23□□□□□ -0.77
RAB6A-210ENST00000545625 RIMBP3Q9UFD9 1639 aa10.23□□□□□ -0.77
RAB6A-210ENST00000545625 PLCG2P16885 1265 aa10.23□□□□□ -0.77
RAB6A-210ENST00000545625 SETD5Q9C0A6 1442 aa10.23□□□□□ -0.77
RAB6A-210ENST00000545625 ARHGAP5Q13017 1502 aa10.23□□□□□ -0.77
RAB6A-210ENST00000545625 IRX5P78411 483 aaPredicted RBP10.22□□□□□ -0.77
RAB6A-210ENST00000545625 RSPH4AQ5TD94 716 aa10.22□□□□□ -0.77
RAB6A-210ENST00000545625 ITSN2Q9NZM3 1697 aa10.22□□□□□ -0.77
RAB6A-210ENST00000545625 PSEN1P49768 467 aa10.2□□□□□ -0.78
RAB6A-210ENST00000545625 CAMSAP2Q08AD1 1489 aa10.2□□□□□ -0.78
RAB6A-210ENST00000545625 TCOF1Q13428 1488 aaKnown RBP10.2□□□□□ -0.78
RAB6A-210ENST00000545625 ABCC10Q5T3U5 1492 aa10.2□□□□□ -0.78
RAB6A-210ENST00000545625 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.2□□□□□ -0.78
RAB6A-210ENST00000545625 RAB3GAP2Q9H2M9 1393 aa10.2□□□□□ -0.78
RAB6A-210ENST00000545625 FAM69CQ0P6D2 419 aa10.19□□□□□ -0.78
RAB6A-210ENST00000545625 PLCH2O75038 1416 aa10.18□□□□□ -0.78
RAB6A-210ENST00000545625 DAPK1P53355 1430 aa10.18□□□□□ -0.78
RAB6A-210ENST00000545625 ANKRD30AQ9BXX3 1397 aa10.17□□□□□ -0.78
RAB6A-210ENST00000545625 GOLGA2Q08379 1002 aa10.17□□□□□ -0.78
RAB6A-210ENST00000545625 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
RAB6A-210ENST00000545625 ABCC5O15440 1437 aa10.16□□□□□ -0.78
RAB6A-210ENST00000545625 CD109Q6YHK3 1445 aa10.16□□□□□ -0.78
RAB6A-210ENST00000545625 PLEKHH2Q8IVE3 1493 aa10.16□□□□□ -0.78
RAB6A-210ENST00000545625 PTPRKQ15262 1439 aa10.16□□□□□ -0.78
RAB6A-210ENST00000545625 ACIN1Q9UKV3 1341 aaKnown RBP10.15□□□□□ -0.78
RAB6A-210ENST00000545625 TTC37Q6PGP7 1564 aa10.15□□□□□ -0.78
RAB6A-210ENST00000545625 MKRN3Q13064 507 aaKnown RBP10.15□□□□□ -0.78
RAB6A-210ENST00000545625 PDAP1Q13442 181 aaKnown RBP10.15□□□□□ -0.78
RAB6A-210ENST00000545625 CDC42BPAQ5VT25 1732 aa10.15□□□□□ -0.78
RAB6A-210ENST00000545625 MYO5CQ9NQX4 1742 aa10.15□□□□□ -0.78
RAB6A-210ENST00000545625 FAM163AQ96GL9 167 aaPredicted RBP10.14□□□□□ -0.79
RAB6A-210ENST00000545625 SPAG9O60271 1321 aaKnown RBP10.13□□□□□ -0.79
RAB6A-210ENST00000545625 FANCAO15360 1455 aa10.13□□□□□ -0.79
RAB6A-210ENST00000545625 PREX2Q70Z35 1606 aa10.13□□□□□ -0.79
RAB6A-210ENST00000545625 HFM1A2PYH4 1435 aa10.13□□□□□ -0.79
RAB6A-210ENST00000545625 ROCK1Q13464 1354 aa10.13□□□□□ -0.79
RAB6A-210ENST00000545625 NEUROD1Q13562 356 aa10.12□□□□□ -0.79
RAB6A-210ENST00000545625 AFAP1Q8N556 730 aa10.12□□□□□ -0.79
RAB6A-210ENST00000545625 C9orf84Q5VXU9 1444 aa10.12□□□□□ -0.79
RAB6A-210ENST00000545625 AKNAQ7Z591 1439 aa10.12□□□□□ -0.79
RAB6A-210ENST00000545625 DNMT1P26358 1616 aaKnown RBP10.11□□□□□ -0.79
RAB6A-210ENST00000545625 CCDC141Q6ZP82 1450 aa10.11□□□□□ -0.79
RAB6A-210ENST00000545625 CDC42BPBQ9Y5S2 1711 aa10.11□□□□□ -0.79
RAB6A-210ENST00000545625 NAIPQ13075 1403 aa10.11□□□□□ -0.79
RAB6A-210ENST00000545625 SCAPERQ9BY12 1400 aa10.11□□□□□ -0.79
RAB6A-210ENST00000545625 POTEMA6NI47 508 aa10.11□□□□□ -0.79
RAB6A-210ENST00000545625 SLAIN1Q8ND83 568 aa10.11□□□□□ -0.79
RAB6A-210ENST00000545625 KIAA1107Q9UPP5 1409 aa10.1□□□□□ -0.79
RAB6A-210ENST00000545625 POTEGQ6S5H5 508 aa10.1□□□□□ -0.79
RAB6A-210ENST00000545625 PDCD7Q8N8D1 485 aaKnown RBP10.1□□□□□ -0.79
RAB6A-210ENST00000545625 CABP2Q9NPB3 220 aa10.1□□□□□ -0.79
RAB6A-210ENST00000545625 SYCP2Q9BX26 1530 aa10.1□□□□□ -0.79
RAB6A-210ENST00000545625 DHX57Q6P158 1386 aaKnown RBP10.1□□□□□ -0.79
RAB6A-210ENST00000545625 SAMD9LQ8IVG5 1584 aa10.09□□□□□ -0.79
RAB6A-210ENST00000545625 ABCA9Q8IUA7 1624 aa10.09□□□□□ -0.79
RAB6A-210ENST00000545625 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.09□□□□□ -0.795e-7■□□□□ 10.6
RAB6A-210ENST00000545625 ADGRL1O94910 1474 aa10.09□□□□□ -0.79
RAB6A-210ENST00000545625 NCOA1Q15788 1441 aa10.08□□□□□ -0.8
RAB6A-210ENST00000545625 MAPKBP1O60336 1514 aa10.08□□□□□ -0.8
RAB6A-210ENST00000545625 LCE2DQ5TA82 110 aaPredicted RBP10.08□□□□□ -0.8
RAB6A-210ENST00000545625 MPHOSPH9Q99550 1183 aa10.08□□□□□ -0.8
RAB6A-210ENST00000545625 KIF15Q9NS87 1388 aa10.08□□□□□ -0.8
RAB6A-210ENST00000545625 CLSPNQ9HAW4 1339 aa10.07□□□□□ -0.8
RAB6A-210ENST00000545625 ARHGEF5Q12774 1597 aa10.07□□□□□ -0.8
RAB6A-210ENST00000545625 MBD5Q9P267 1494 aa10.07□□□□□ -0.8
RAB6A-210ENST00000545625 ANKRD50Q9ULJ7 1429 aa10.07□□□□□ -0.8
RAB6A-210ENST00000545625 TRAPPC8Q9Y2L5 1435 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms