RNA–Protein interactions for RNA: ENST00000545042.1

DDX55-213, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 450 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-213ENST00000545042 RRP7BPQ9NSQ0 103 aa20.38■□□□□ 0.85
DDX55-213ENST00000545042 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
DDX55-213ENST00000545042 ANKRD30AQ9BXX3 1397 aa20.37■□□□□ 0.85
DDX55-213ENST00000545042 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
DDX55-213ENST00000545042 CHIC2Q9UKJ5 165 aa20.37■□□□□ 0.85
DDX55-213ENST00000545042 NPATQ14207 1427 aa20.36■□□□□ 0.85
DDX55-213ENST00000545042 EIF2AK4Q9P2K8 1649 aaKnown RBP20.36■□□□□ 0.85
DDX55-213ENST00000545042 HSPA2P54652 639 aa20.35■□□□□ 0.85
DDX55-213ENST00000545042 KDM5DQ9BY66 1539 aa20.35■□□□□ 0.85
DDX55-213ENST00000545042 ERBINQ96RT1 1412 aa20.34■□□□□ 0.85
DDX55-213ENST00000545042 RNF17Q9BXT8 1623 aaKnown RBP20.33■□□□□ 0.84
DDX55-213ENST00000545042 PTPRKQ15262 1439 aa20.3■□□□□ 0.84
DDX55-213ENST00000545042 NCOA1Q15788 1441 aa20.3■□□□□ 0.84
DDX55-213ENST00000545042 ADGRL2O95490 1459 aa20.29■□□□□ 0.84
DDX55-213ENST00000545042 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.27■□□□□ 0.84
DDX55-213ENST00000545042 ZC3H13Q5T200 1668 aaKnown RBP20.26■□□□□ 0.83
DDX55-213ENST00000545042 PZPP20742 1482 aa20.26■□□□□ 0.83
DDX55-213ENST00000545042 ABCC3O15438 1527 aa20.25■□□□□ 0.83
DDX55-213ENST00000545042 KANK1Q14678 1352 aa20.24■□□□□ 0.83
DDX55-213ENST00000545042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.83
DDX55-213ENST00000545042 ITGAEP38570 1179 aa20.23■□□□□ 0.83
DDX55-213ENST00000545042 MROH1Q8NDA8 1641 aa20.23■□□□□ 0.83
DDX55-213ENST00000545042 FBXO31Q5XUX0 539 aaPredicted RBP20.22■□□□□ 0.83
DDX55-213ENST00000545042 PRDM15P57071 1507 aaPredicted RBP20.22■□□□□ 0.83
DDX55-213ENST00000545042 TNRQ92752 1358 aa20.21■□□□□ 0.83
DDX55-213ENST00000545042 ROCK1Q13464 1354 aa20.21■□□□□ 0.83
DDX55-213ENST00000545042 MYO3AQ8NEV4 1616 aa20.2■□□□□ 0.82
DDX55-213ENST00000545042 ANKRD50Q9ULJ7 1429 aa20.2■□□□□ 0.82
DDX55-213ENST00000545042 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
DDX55-213ENST00000545042 RRBP1Q9P2E9 1410 aaKnown RBP20.19■□□□□ 0.82
DDX55-213ENST00000545042 DEPDC5O75140 1603 aa20.19■□□□□ 0.82
DDX55-213ENST00000545042 CEP152O94986 1710 aa20.19■□□□□ 0.82
DDX55-213ENST00000545042 CEP170BQ9Y4F5 1589 aaPredicted RBP20.18■□□□□ 0.82
DDX55-213ENST00000545042 ZNF142P52746 1687 aaPredicted RBP20.17■□□□□ 0.82
DDX55-213ENST00000545042 CAMSAP1Q5T5Y3 1602 aa20.16■□□□□ 0.82
DDX55-213ENST00000545042 A2ML1A8K2U0 1454 aa20.16■□□□□ 0.82
DDX55-213ENST00000545042 NLRP1Q9C000 1473 aa20.13■□□□□ 0.81
DDX55-213ENST00000545042 ARHGAP31Q2M1Z3 1444 aa20.13■□□□□ 0.81
DDX55-213ENST00000545042 STRCQ7RTU9 1775 aa20.13■□□□□ 0.81
DDX55-213ENST00000545042 ERVK-7P63135 1459 aa20.12■□□□□ 0.81
DDX55-213ENST00000545042 SPATA31D1Q6ZQQ2 1576 aa20.12■□□□□ 0.81
DDX55-213ENST00000545042 LMTK2Q8IWU2 1503 aa20.11■□□□□ 0.81
DDX55-213ENST00000545042 PLA2R1Q13018 1463 aa20.11■□□□□ 0.81
DDX55-213ENST00000545042 VWDEQ8N2E2 1590 aa20.1■□□□□ 0.81
DDX55-213ENST00000545042 PKD2Q13563 968 aa20.09■□□□□ 0.81
DDX55-213ENST00000545042 PTPRTO14522 1441 aa20.09■□□□□ 0.81
DDX55-213ENST00000545042 THEMISQ8N1K5 641 aaPredicted RBP20.08■□□□□ 0.81
DDX55-213ENST00000545042 CFAP65Q6ZU64 1925 aaKnown RBP20.08■□□□□ 0.8
DDX55-213ENST00000545042 NCKAP5LQ9HCH0 1330 aa20.06■□□□□ 0.8
DDX55-213ENST00000545042 UGGT1Q9NYU2 1555 aa20.06■□□□□ 0.8
DDX55-213ENST00000545042 UNC13BO14795 1591 aa20.05■□□□□ 0.8
DDX55-213ENST00000545042 EFCAB6Q5THR3 1501 aa20.05■□□□□ 0.8
DDX55-213ENST00000545042 ANKLE2Q86XL3 938 aa20.02■□□□□ 0.8
DDX55-213ENST00000545042 RPRD2Q5VT52 1461 aaKnown RBP20.02■□□□□ 0.8
DDX55-213ENST00000545042 TET3O43151 1660 aa20.01■□□□□ 0.79
DDX55-213ENST00000545042 NUP155O75694 1391 aa20.01■□□□□ 0.79
DDX55-213ENST00000545042 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
DDX55-213ENST00000545042 NAIPQ13075 1403 aa19.98■□□□□ 0.79
DDX55-213ENST00000545042 IQGAP3Q86VI3 1631 aa19.98■□□□□ 0.79
DDX55-213ENST00000545042 GCC2Q8IWJ2 1684 aa19.97■□□□□ 0.79
DDX55-213ENST00000545042 NOS1P29475 1434 aa19.97■□□□□ 0.79
DDX55-213ENST00000545042 SLC52A1Q9NWF4 448 aa19.96■□□□□ 0.79
DDX55-213ENST00000545042 POLR1AO95602 1720 aaPredicted RBP19.96■□□□□ 0.79
DDX55-213ENST00000545042 HFM1A2PYH4 1435 aa19.95■□□□□ 0.78
DDX55-213ENST00000545042 CERKQ8TCT0 537 aa19.95■□□□□ 0.78
DDX55-213ENST00000545042 UBR1Q8IWV7 1749 aa19.95■□□□□ 0.78
DDX55-213ENST00000545042 IDI1Q13907 227 aa19.94■□□□□ 0.78
DDX55-213ENST00000545042 SYNMO15061 1565 aa19.94■□□□□ 0.78
DDX55-213ENST00000545042 ILDR1Q86SU0 546 aaPredicted RBP19.93■□□□□ 0.78
DDX55-213ENST00000545042 PIK3C2BO00750 1634 aa19.93■□□□□ 0.78
DDX55-213ENST00000545042 FBXO41Q8TF61 875 aa19.91■□□□□ 0.78
DDX55-213ENST00000545042 EID1Q9Y6B2 187 aa19.91■□□□□ 0.78
DDX55-213ENST00000545042 NEURL4Q96JN8 1562 aa19.91■□□□□ 0.78
DDX55-213ENST00000545042 E9PCH4 1651 aa19.91■□□□□ 0.78
DDX55-213ENST00000545042 NPHP4O75161 1426 aaPredicted RBP19.9■□□□□ 0.78
DDX55-213ENST00000545042 MED14O60244 1454 aa19.9■□□□□ 0.78
DDX55-213ENST00000545042 KDM5AP29375 1690 aaKnown RBP19.9■□□□□ 0.78
DDX55-213ENST00000545042 TXNDC2Q86VQ3 553 aa19.89■□□□□ 0.77
DDX55-213ENST00000545042 TRIM52Q96A61 297 aa19.89■□□□□ 0.77
DDX55-213ENST00000545042 SLIT1O75093 1534 aa19.88■□□□□ 0.77
DDX55-213ENST00000545042 SCAF11Q99590 1463 aaKnown RBP19.88■□□□□ 0.77
DDX55-213ENST00000545042 ADGRB3O60242 1522 aa19.87■□□□□ 0.77
DDX55-213ENST00000545042 ARHGAP23Q9P227 1491 aa19.87■□□□□ 0.77
DDX55-213ENST00000545042 TMEM2Q9UHN6 1383 aa19.87■□□□□ 0.77
DDX55-213ENST00000545042 ZNF335Q9H4Z2 1342 aaPredicted RBP19.87■□□□□ 0.77
DDX55-213ENST00000545042 LTBP4Q8N2S1 1624 aa19.86■□□□□ 0.77
DDX55-213ENST00000545042 IQGAP1P46940 1657 aa19.85■□□□□ 0.77
DDX55-213ENST00000545042 CHGAP10645 457 aaKnown RBP19.84■□□□□ 0.77
DDX55-213ENST00000545042 LTKP29376 864 aa19.84■□□□□ 0.77
DDX55-213ENST00000545042 HDGFP51858 240 aaKnown RBP19.82■□□□□ 0.76
DDX55-213ENST00000545042 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
DDX55-213ENST00000545042 ACIN1Q9UKV3 1341 aaKnown RBP19.8■□□□□ 0.76
DDX55-213ENST00000545042 IQSEC2Q5JU85 1478 aa19.79■□□□□ 0.76
DDX55-213ENST00000545042 SPHKAPQ2M3C7 1700 aa19.79■□□□□ 0.76
DDX55-213ENST00000545042 TMEM131LA2VDJ0 1609 aa19.78■□□□□ 0.76
DDX55-213ENST00000545042 CPS1P31327 1500 aa19.77■□□□□ 0.76
DDX55-213ENST00000545042 PPP1R15AO75807 674 aaPredicted RBP19.77■□□□□ 0.76
DDX55-213ENST00000545042 SETD5Q9C0A6 1442 aa19.76■□□□□ 0.75
DDX55-213ENST00000545042 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.76■□□□□ 0.75
DDX55-213ENST00000545042 BCANQ96GW7 911 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms