RNA–Protein interactions for RNA: ENST00000544691.6

SDR39U1-203, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 1 (best)

Gene SDR39U1, Length 1,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-203ENST00000544691 ESF1Q9H501 851 aaKnown RBP29.4■■■□□ 2.3
SDR39U1-203ENST00000544691 RNF17Q9BXT8 1623 aaKnown RBP29.39■■■□□ 2.3
SDR39U1-203ENST00000544691 CEBPAP49715 358 aaPredicted RBP29.37■■■□□ 2.29
SDR39U1-203ENST00000544691 CNTLNQ9NXG0 1405 aa29.37■■■□□ 2.29
SDR39U1-203ENST00000544691 CLTCQ00610 1675 aaKnown RBP29.36■■■□□ 2.29
SDR39U1-203ENST00000544691 MROH1Q8NDA8 1641 aa29.36■■■□□ 2.29
SDR39U1-203ENST00000544691 ANKRD50Q9ULJ7 1429 aa29.35■■■□□ 2.29
SDR39U1-203ENST00000544691 PPP6R1Q9UPN7 881 aa29.35■■■□□ 2.29
SDR39U1-203ENST00000544691 C3P01024 1663 aa29.31■■■□□ 2.28
SDR39U1-203ENST00000544691 KDM5DQ9BY66 1539 aa29.31■■■□□ 2.28
SDR39U1-203ENST00000544691 WASHC2CQ9Y4E1 1318 aa29.3■■■□□ 2.28
SDR39U1-203ENST00000544691 MROH2AA6NES4 1674 aa29.3■■■□□ 2.28
SDR39U1-203ENST00000544691 ZMYM3Q14202 1370 aa29.3■■■□□ 2.28
SDR39U1-203ENST00000544691 PRDM15P57071 1507 aaPredicted RBP29.29■■■□□ 2.28
SDR39U1-203ENST00000544691 DEPDC5O75140 1603 aa29.28■■■□□ 2.28
SDR39U1-203ENST00000544691 FAM135AQ9P2D6 1515 aa29.27■■■□□ 2.28
SDR39U1-203ENST00000544691 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.26■■■□□ 2.276e-6■□□□□ 8.3
SDR39U1-203ENST00000544691 ABCC3O15438 1527 aa29.26■■■□□ 2.27
SDR39U1-203ENST00000544691 NAIPQ13075 1403 aa29.23■■■□□ 2.27
SDR39U1-203ENST00000544691 ZC3H13Q5T200 1668 aaKnown RBP29.21■■■□□ 2.27
SDR39U1-203ENST00000544691 CEP152O94986 1710 aa29.21■■■□□ 2.27
SDR39U1-203ENST00000544691 HFM1A2PYH4 1435 aa29.19■■■□□ 2.26
SDR39U1-203ENST00000544691 GCC2Q8IWJ2 1684 aa29.18■■■□□ 2.26
SDR39U1-203ENST00000544691 VWDEQ8N2E2 1590 aa29.18■■■□□ 2.26
SDR39U1-203ENST00000544691 KANK1Q14678 1352 aa29.17■■■□□ 2.26
SDR39U1-203ENST00000544691 UNC13BO14795 1591 aa29.16■■■□□ 2.26
SDR39U1-203ENST00000544691 PZPP20742 1482 aa29.15■■■□□ 2.26
SDR39U1-203ENST00000544691 CAMSAP1Q5T5Y3 1602 aa29.15■■■□□ 2.26
SDR39U1-203ENST00000544691 NPATQ14207 1427 aa29.14■■■□□ 2.25
SDR39U1-203ENST00000544691 FBXO31Q5XUX0 539 aaPredicted RBP29.14■■■□□ 2.25
SDR39U1-203ENST00000544691 LMTK3Q96Q04 1460 aa29.12■■■□□ 2.25
SDR39U1-203ENST00000544691 LMTK2Q8IWU2 1503 aa29.11■■■□□ 2.25
SDR39U1-203ENST00000544691 PREX1Q8TCU6 1659 aa29.09■■■□□ 2.25
SDR39U1-203ENST00000544691 SETD1BQ9UPS6 1966 aaKnown RBP29.08■■■□□ 2.25
SDR39U1-203ENST00000544691 NUP155O75694 1391 aa29.06■■■□□ 2.24
SDR39U1-203ENST00000544691 UHRF1BP1Q6BDS2 1440 aa29.06■■■□□ 2.24
SDR39U1-203ENST00000544691 ARHGAP31Q2M1Z3 1444 aa29.05■■■□□ 2.24
SDR39U1-203ENST00000544691 EFCAB6Q5THR3 1501 aa29.04■■■□□ 2.24
SDR39U1-203ENST00000544691 IQGAP3Q86VI3 1631 aa29.03■■■□□ 2.24
SDR39U1-203ENST00000544691 TNRQ92752 1358 aa29.03■■■□□ 2.24
SDR39U1-203ENST00000544691 ERVK-7P63135 1459 aa29.02■■■□□ 2.24
SDR39U1-203ENST00000544691 MYO3AQ8NEV4 1616 aa29.01■■■□□ 2.24
SDR39U1-203ENST00000544691 HSPA2P54652 639 aa29.01■■■□□ 2.23
SDR39U1-203ENST00000544691 SPATA31D1Q6ZQQ2 1576 aa29.01■■■□□ 2.23
SDR39U1-203ENST00000544691 CFAP65Q6ZU64 1925 aaKnown RBP29.01■■■□□ 2.23
SDR39U1-203ENST00000544691 TET3O43151 1660 aa29■■■□□ 2.23
SDR39U1-203ENST00000544691 SETD5Q9C0A6 1442 aa28.96■■■□□ 2.23
SDR39U1-203ENST00000544691 CEP170BQ9Y4F5 1589 aaPredicted RBP28.94■■■□□ 2.22
SDR39U1-203ENST00000544691 TRIM52Q96A61 297 aa28.94■■■□□ 2.22
SDR39U1-203ENST00000544691 E9PCH4 1651 aa28.92■■■□□ 2.22
SDR39U1-203ENST00000544691 ZNF142P52746 1687 aaPredicted RBP28.92■■■□□ 2.22
SDR39U1-203ENST00000544691 RPRD2Q5VT52 1461 aaKnown RBP28.92■■■□□ 2.22
SDR39U1-203ENST00000544691 RAB3GAP2Q9H2M9 1393 aa28.9■■■□□ 2.22
SDR39U1-203ENST00000544691 A2ML1A8K2U0 1454 aa28.9■■■□□ 2.22
SDR39U1-203ENST00000544691 NOS1P29475 1434 aa28.9■■■□□ 2.22
SDR39U1-203ENST00000544691 NLRP1Q9C000 1473 aa28.89■■■□□ 2.22
SDR39U1-203ENST00000544691 SYNMO15061 1565 aa28.88■■■□□ 2.21
SDR39U1-203ENST00000544691 SLC4A1APQ9BWU0 796 aaKnown RBP28.82■■■□□ 2.2
SDR39U1-203ENST00000544691 UGGT1Q9NYU2 1555 aa28.82■■■□□ 2.2
SDR39U1-203ENST00000544691 IDI1Q13907 227 aa28.79■■■□□ 2.2
SDR39U1-203ENST00000544691 PKD2Q13563 968 aa28.79■■■□□ 2.2
SDR39U1-203ENST00000544691 PIK3C2BO00750 1634 aa28.77■■■□□ 2.2
SDR39U1-203ENST00000544691 TRIM26Q12899 539 aaPredicted RBP28.76■■■□□ 2.19
SDR39U1-203ENST00000544691 STRCQ7RTU9 1775 aa28.75■■■□□ 2.19
SDR39U1-203ENST00000544691 UBR1Q8IWV7 1749 aa28.75■■■□□ 2.19
SDR39U1-203ENST00000544691 SLC52A1Q9NWF4 448 aa28.74■■■□□ 2.19
SDR39U1-203ENST00000544691 MPHOSPH9Q99550 1183 aa28.74■■■□□ 2.19
SDR39U1-203ENST00000544691 SPHKAPQ2M3C7 1700 aa28.74■■■□□ 2.19
SDR39U1-203ENST00000544691 PLA2R1Q13018 1463 aa28.73■■■□□ 2.19
SDR39U1-203ENST00000544691 PTPRTO14522 1441 aa28.73■■■□□ 2.19
SDR39U1-203ENST00000544691 FOXD1Q16676 465 aa28.73■■■□□ 2.19
SDR39U1-203ENST00000544691 THEMISQ8N1K5 641 aaPredicted RBP28.73■■■□□ 2.19
SDR39U1-203ENST00000544691 ACIN1Q9UKV3 1341 aaKnown RBP28.71■■■□□ 2.19
SDR39U1-203ENST00000544691 NCKAP5LQ9HCH0 1330 aa28.69■■■□□ 2.18
SDR39U1-203ENST00000544691 HRCP23327 699 aa28.69■■■□□ 2.18
SDR39U1-203ENST00000544691 STAG3Q9UJ98 1225 aa28.69■■■□□ 2.18
SDR39U1-203ENST00000544691 ADGRB3O60242 1522 aa28.67■■■□□ 2.18
SDR39U1-203ENST00000544691 TRPM2O94759 1503 aa28.67■■■□□ 2.18
SDR39U1-203ENST00000544691 KDM5AP29375 1690 aaKnown RBP28.65■■■□□ 2.18
SDR39U1-203ENST00000544691 TMEM131LA2VDJ0 1609 aa28.62■■■□□ 2.17
SDR39U1-203ENST00000544691 CLTCL1P53675 1640 aa28.62■■■□□ 2.17
SDR39U1-203ENST00000544691 ARHGAP23Q9P227 1491 aa28.61■■■□□ 2.17
SDR39U1-203ENST00000544691 SLIT1O75093 1534 aa28.61■■■□□ 2.17
SDR39U1-203ENST00000544691 CHGAP10645 457 aaKnown RBP28.61■■■□□ 2.17
SDR39U1-203ENST00000544691 MYO5BQ9ULV0 1848 aa28.6■■■□□ 2.17
SDR39U1-203ENST00000544691 NEURL4Q96JN8 1562 aa28.6■■■□□ 2.17
SDR39U1-203ENST00000544691 ANKLE2Q86XL3 938 aa28.6■■■□□ 2.17
SDR39U1-203ENST00000544691 TMEM2Q9UHN6 1383 aa28.6■■■□□ 2.17
SDR39U1-203ENST00000544691 POLR1AO95602 1720 aaPredicted RBP28.6■■■□□ 2.17
SDR39U1-203ENST00000544691 LTKP29376 864 aa28.58■■■□□ 2.17
SDR39U1-203ENST00000544691 DMRT2Q9Y5R5 561 aa28.57■■■□□ 2.16
SDR39U1-203ENST00000544691 SCAF11Q99590 1463 aaKnown RBP28.55■■■□□ 2.16
SDR39U1-203ENST00000544691 TXNDC2Q86VQ3 553 aa28.54■■■□□ 2.16
SDR39U1-203ENST00000544691 MED14O60244 1454 aa28.52■■■□□ 2.16
SDR39U1-203ENST00000544691 EID1Q9Y6B2 187 aa28.51■■■□□ 2.15
SDR39U1-203ENST00000544691 ZFYVE9O95405 1425 aa28.51■■■□□ 2.15
SDR39U1-203ENST00000544691 CCDC144AA2RUR9 1427 aa28.5■■■□□ 2.15
SDR39U1-203ENST00000544691 NPHP4O75161 1426 aaPredicted RBP28.5■■■□□ 2.15
SDR39U1-203ENST00000544691 RIMS2Q9UQ26 1411 aa28.49■■■□□ 2.15
SDR39U1-203ENST00000544691 KIF1BO60333 1816 aa28.47■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms