RNA–Protein interactions for RNA: ENST00000544268.5

CHFR-223, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 2,412 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-223ENST00000544268 PKD2Q13563 968 aa21■□□□□ 0.95
CHFR-223ENST00000544268 ERBINQ96RT1 1412 aa21■□□□□ 0.95
CHFR-223ENST00000544268 ZNF518AQ6AHZ1 1483 aa21■□□□□ 0.95
CHFR-223ENST00000544268 SLC24A1O60721 1099 aa21■□□□□ 0.95
CHFR-223ENST00000544268 NEO1Q92859 1461 aa21■□□□□ 0.95
CHFR-223ENST00000544268 MYT1LQ9UL68 1186 aa20.99■□□□□ 0.95
CHFR-223ENST00000544268 POGZQ7Z3K3 1410 aa20.99■□□□□ 0.95
CHFR-223ENST00000544268 UNC13BO14795 1591 aa20.98■□□□□ 0.95
CHFR-223ENST00000544268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.96■□□□□ 0.95
CHFR-223ENST00000544268 FAM135AQ9P2D6 1515 aa20.96■□□□□ 0.95
CHFR-223ENST00000544268 KIDINS220Q9ULH0 1771 aa20.95■□□□□ 0.94
CHFR-223ENST00000544268 KDM5CP41229 1560 aa20.95■□□□□ 0.94
CHFR-223ENST00000544268 RAPGEF3O95398 923 aa20.93■□□□□ 0.94
CHFR-223ENST00000544268 ANP32CO43423 234 aa20.92■□□□□ 0.94
CHFR-223ENST00000544268 RPRD2Q5VT52 1461 aaKnown RBP20.92■□□□□ 0.94
CHFR-223ENST00000544268 TSPOAP1O95153 1857 aa20.92■□□□□ 0.94
CHFR-223ENST00000544268 MAGI2Q86UL8 1455 aa20.92■□□□□ 0.94
CHFR-223ENST00000544268 BCANQ96GW7 911 aa20.92■□□□□ 0.94
CHFR-223ENST00000544268 L3MBTL2Q969R5 705 aa20.9■□□□□ 0.94
CHFR-223ENST00000544268 HSPA5P11021 654 aaKnown RBP20.9■□□□□ 0.94
CHFR-223ENST00000544268 IQGAP3Q86VI3 1631 aa20.9■□□□□ 0.94
CHFR-223ENST00000544268 MLH3Q9UHC1 1453 aa20.89■□□□□ 0.94
CHFR-223ENST00000544268 DHX29Q7Z478 1369 aaKnown RBP20.89■□□□□ 0.93
CHFR-223ENST00000544268 PPRC1Q5VV67 1664 aaKnown RBP20.89■□□□□ 0.93
CHFR-223ENST00000544268 HECW2Q9P2P5 1572 aa20.89■□□□□ 0.93
CHFR-223ENST00000544268 KIF13AQ9H1H9 1805 aa20.87■□□□□ 0.93
CHFR-223ENST00000544268 RICTORQ6R327 1708 aa20.86■□□□□ 0.93
CHFR-223ENST00000544268 WASHC2AQ641Q2 1341 aa20.86■□□□□ 0.93
CHFR-223ENST00000544268 KIF3BO15066 747 aa20.85■□□□□ 0.93
CHFR-223ENST00000544268 DEPDC5O75140 1603 aa20.85■□□□□ 0.93
CHFR-223ENST00000544268 A2MP01023 1474 aa20.84■□□□□ 0.93
CHFR-223ENST00000544268 C11orf95C9JLR9 678 aaPredicted RBP20.84■□□□□ 0.93
CHFR-223ENST00000544268 EIF2AK4Q9P2K8 1649 aaKnown RBP20.83■□□□□ 0.93
CHFR-223ENST00000544268 ABCA6Q8N139 1617 aa20.83■□□□□ 0.92
CHFR-223ENST00000544268 NBPF8Q3BBV2 869 aa20.83■□□□□ 0.92
CHFR-223ENST00000544268 TEX14Q8IWB6 1497 aa20.82■□□□□ 0.92
CHFR-223ENST00000544268 FRMPD1Q5SYB0 1578 aa20.81■□□□□ 0.92
CHFR-223ENST00000544268 CCER2I3L3R5 266 aa20.8■□□□□ 0.92
CHFR-223ENST00000544268 FKBP8Q14318 412 aa20.8■□□□□ 0.92
CHFR-223ENST00000544268 RBM19Q9Y4C8 960 aaKnown RBP20.8■□□□□ 0.92
CHFR-223ENST00000544268 MROH1Q8NDA8 1641 aa20.79■□□□□ 0.92
CHFR-223ENST00000544268 PLA2R1Q13018 1463 aa20.78■□□□□ 0.92
CHFR-223ENST00000544268 DIP2CQ9Y2E4 1556 aa20.77■□□□□ 0.92
CHFR-223ENST00000544268 PRDM15P57071 1507 aaPredicted RBP20.77■□□□□ 0.92
CHFR-223ENST00000544268 VWDEQ8N2E2 1590 aa20.77■□□□□ 0.91
CHFR-223ENST00000544268 YEATS2Q9ULM3 1422 aa20.76■□□□□ 0.91
CHFR-223ENST00000544268 KANK1Q14678 1352 aa20.76■□□□□ 0.91
CHFR-223ENST00000544268 CCDC184Q52MB2 194 aa20.76■□□□□ 0.91
CHFR-223ENST00000544268 EIF4G2P78344 907 aaKnown RBP eCLIP20.75■□□□□ 0.91
CHFR-223ENST00000544268 E9PCH4 1651 aa20.74■□□□□ 0.91
CHFR-223ENST00000544268 CCDC144AA2RUR9 1427 aa20.73■□□□□ 0.91
CHFR-223ENST00000544268 ZMYM4Q5VZL5 1548 aa20.73■□□□□ 0.91
CHFR-223ENST00000544268 RNF17Q9BXT8 1623 aaKnown RBP20.73■□□□□ 0.91
CHFR-223ENST00000544268 TET3O43151 1660 aa20.72■□□□□ 0.91
CHFR-223ENST00000544268 ATP10AO60312 1499 aa20.71■□□□□ 0.91
CHFR-223ENST00000544268 COL17A1Q9UMD9 1497 aaPredicted RBP20.7■□□□□ 0.9
CHFR-223ENST00000544268 TRHP20396 242 aaPredicted RBP20.69■□□□□ 0.9
CHFR-223ENST00000544268 GGT6Q6P531 493 aa20.69■□□□□ 0.9
CHFR-223ENST00000544268 BCORL1Q5H9F3 1711 aa20.69■□□□□ 0.9
CHFR-223ENST00000544268 ZNF326Q5BKZ1 582 aaKnown RBP20.68■□□□□ 0.9
CHFR-223ENST00000544268 CNGB1Q14028 1251 aaPredicted RBP20.68■□□□□ 0.9
CHFR-223ENST00000544268 HNRNPUQ00839 825 aaKnown RBP eCLIP20.67■□□□□ 0.9
CHFR-223ENST00000544268 CEP152O94986 1710 aa20.66■□□□□ 0.9
CHFR-223ENST00000544268 EFCAB6Q5THR3 1501 aa20.64■□□□□ 0.9
CHFR-223ENST00000544268 LMTK2Q8IWU2 1503 aa20.64■□□□□ 0.9
CHFR-223ENST00000544268 PTPRTO14522 1441 aa20.64■□□□□ 0.9
CHFR-223ENST00000544268 SPHKAPQ2M3C7 1700 aa20.64■□□□□ 0.89
CHFR-223ENST00000544268 TRPM2O94759 1503 aa20.63■□□□□ 0.89
CHFR-223ENST00000544268 CCDC7Q96M83 1385 aa20.63■□□□□ 0.89
CHFR-223ENST00000544268 RGL3Q3MIN7 710 aa20.62■□□□□ 0.89
CHFR-223ENST00000544268 DCAF11Q8TEB1 546 aa20.62■□□□□ 0.89
CHFR-223ENST00000544268 KDM2AQ9Y2K7 1162 aa20.61■□□□□ 0.89
CHFR-223ENST00000544268 MSH5O43196 834 aa20.61■□□□□ 0.89
CHFR-223ENST00000544268 IRX6P78412 446 aaPredicted RBP20.61■□□□□ 0.89
CHFR-223ENST00000544268 WASHC2CQ9Y4E1 1318 aa20.6■□□□□ 0.89
CHFR-223ENST00000544268 CNTLNQ9NXG0 1405 aa20.6■□□□□ 0.89
CHFR-223ENST00000544268 ABCC3O15438 1527 aa20.6■□□□□ 0.89
CHFR-223ENST00000544268 KIF7Q2M1P5 1343 aa20.6■□□□□ 0.89
CHFR-223ENST00000544268 POLR3GLQ9BT43 218 aa20.58■□□□□ 0.89
CHFR-223ENST00000544268 UHRF1BP1Q6BDS2 1440 aa20.58■□□□□ 0.89
CHFR-223ENST00000544268 CLTCL1P53675 1640 aa20.58■□□□□ 0.89
CHFR-223ENST00000544268 NPATQ14207 1427 aa20.57■□□□□ 0.88
CHFR-223ENST00000544268 SPATA31E1Q6ZUB1 1445 aa20.57■□□□□ 0.88
CHFR-223ENST00000544268 NEFLP07196 543 aa20.56■□□□□ 0.88
CHFR-223ENST00000544268 FAM9BQ8IZU0 186 aa20.56■□□□□ 0.88
CHFR-223ENST00000544268 PRKRIP1Q9H875 184 aaPredicted RBP20.56■□□□□ 0.88
CHFR-223ENST00000544268 REREQ9P2R6 1566 aa20.55■□□□□ 0.88
CHFR-223ENST00000544268 ANO8Q9HCE9 1232 aaPredicted RBP20.55■□□□□ 0.88
CHFR-223ENST00000544268 UGGT1Q9NYU2 1555 aa20.55■□□□□ 0.88
CHFR-223ENST00000544268 CFAP65Q6ZU64 1925 aaKnown RBP20.54■□□□□ 0.88
CHFR-223ENST00000544268 ARHGEF40Q8TER5 1519 aa20.54■□□□□ 0.88
CHFR-223ENST00000544268 FANCIQ9NVI1 1328 aa20.54■□□□□ 0.88
CHFR-223ENST00000544268 CAMSAP1Q5T5Y3 1602 aa20.54■□□□□ 0.88
CHFR-223ENST00000544268 SIGLEC1Q9BZZ2 1709 aa20.53■□□□□ 0.88
CHFR-223ENST00000544268 SENP3-EIF4A1A0A087X0R7 540 aa20.53■□□□□ 0.88
CHFR-223ENST00000544268 AGLP35573 1532 aa20.51■□□□□ 0.87
CHFR-223ENST00000544268 RALGAPBQ86X10 1494 aa20.51■□□□□ 0.87
CHFR-223ENST00000544268 ZC3H13Q5T200 1668 aaKnown RBP20.5■□□□□ 0.87
CHFR-223ENST00000544268 PRAG1Q86YV5 1406 aa20.5■□□□□ 0.87
CHFR-223ENST00000544268 MRS2Q9HD23 443 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms