RNA–Protein interactions for RNA: ENST00000543988.1

OTUB1-212, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 1 (best) BASIC

Gene OTUB1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-212ENST00000543988 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP33.42■■■□□ 2.94
OTUB1-212ENST00000543988 CLTCQ00610 1675 aaKnown RBP33.42■■■□□ 2.94
OTUB1-212ENST00000543988 ERBINQ96RT1 1412 aa33.41■■■□□ 2.94
OTUB1-212ENST00000543988 RRBP1Q9P2E9 1410 aaKnown RBP33.41■■■□□ 2.94
OTUB1-212ENST00000543988 RNF17Q9BXT8 1623 aaKnown RBP33.41■■■□□ 2.94
OTUB1-212ENST00000543988 MROH2AA6NES4 1674 aa33.41■■■□□ 2.94
OTUB1-212ENST00000543988 LMTK3Q96Q04 1460 aa33.39■■■□□ 2.94
OTUB1-212ENST00000543988 ZMYM3Q14202 1370 aa33.39■■■□□ 2.94
OTUB1-212ENST00000543988 KDM5DQ9BY66 1539 aa33.38■■■□□ 2.93
OTUB1-212ENST00000543988 FAM135AQ9P2D6 1515 aa33.38■■■□□ 2.93
OTUB1-212ENST00000543988 MROH1Q8NDA8 1641 aa33.35■■■□□ 2.93
OTUB1-212ENST00000543988 ITGAEP38570 1179 aa33.32■■■□□ 2.92
OTUB1-212ENST00000543988 WASHC2CQ9Y4E1 1318 aa33.3■■■□□ 2.92
OTUB1-212ENST00000543988 NPATQ14207 1427 aa33.29■■■□□ 2.92
OTUB1-212ENST00000543988 ROCK1Q13464 1354 aa33.29■■■□□ 2.92
OTUB1-212ENST00000543988 ABCC3O15438 1527 aa33.28■■■□□ 2.92
OTUB1-212ENST00000543988 PRDM15P57071 1507 aaPredicted RBP33.28■■■□□ 2.92
OTUB1-212ENST00000543988 PREX1Q8TCU6 1659 aa33.26■■■□□ 2.91
OTUB1-212ENST00000543988 ANKRD50Q9ULJ7 1429 aa33.25■■■□□ 2.91
OTUB1-212ENST00000543988 UHRF1BP1Q6BDS2 1440 aa33.24■■■□□ 2.91
OTUB1-212ENST00000543988 DEPDC5O75140 1603 aa33.23■■■□□ 2.91
OTUB1-212ENST00000543988 PZPP20742 1482 aa33.22■■■□□ 2.91
OTUB1-212ENST00000543988 ZC3H13Q5T200 1668 aaKnown RBP33.21■■■□□ 2.91
OTUB1-212ENST00000543988 HSPA2P54652 639 aa33.21■■■□□ 2.91
OTUB1-212ENST00000543988 GRWD1Q9BQ67 446 aaKnown RBP eCLIP33.18■■■□□ 2.98e-7■■□□□ 11.5
OTUB1-212ENST00000543988 FBXO31Q5XUX0 539 aaPredicted RBP33.15■■■□□ 2.9
OTUB1-212ENST00000543988 CEP152O94986 1710 aa33.14■■■□□ 2.9
OTUB1-212ENST00000543988 KANK1Q14678 1352 aa33.13■■■□□ 2.89
OTUB1-212ENST00000543988 SETD1BQ9UPS6 1966 aaKnown RBP33.13■■■□□ 2.89
OTUB1-212ENST00000543988 VWDEQ8N2E2 1590 aa33.13■■■□□ 2.89
OTUB1-212ENST00000543988 CAMSAP1Q5T5Y3 1602 aa33.12■■■□□ 2.89
OTUB1-212ENST00000543988 MYO3AQ8NEV4 1616 aa33.11■■■□□ 2.89
OTUB1-212ENST00000543988 TNRQ92752 1358 aa33.1■■■□□ 2.89
OTUB1-212ENST00000543988 LMTK2Q8IWU2 1503 aa33.07■■■□□ 2.89
OTUB1-212ENST00000543988 ERVK-7P63135 1459 aa33.05■■■□□ 2.88
OTUB1-212ENST00000543988 UNC13BO14795 1591 aa33.04■■■□□ 2.88
OTUB1-212ENST00000543988 ARHGAP31Q2M1Z3 1444 aa33.04■■■□□ 2.88
OTUB1-212ENST00000543988 CEP170BQ9Y4F5 1589 aaPredicted RBP33.04■■■□□ 2.88
OTUB1-212ENST00000543988 SPATA31D1Q6ZQQ2 1576 aa33.03■■■□□ 2.88
OTUB1-212ENST00000543988 ZNF142P52746 1687 aaPredicted RBP33.02■■■□□ 2.88
OTUB1-212ENST00000543988 NAIPQ13075 1403 aa33.01■■■□□ 2.87
OTUB1-212ENST00000543988 A2ML1A8K2U0 1454 aa32.99■■■□□ 2.87
OTUB1-212ENST00000543988 EFCAB6Q5THR3 1501 aa32.99■■■□□ 2.87
OTUB1-212ENST00000543988 HFM1A2PYH4 1435 aa32.95■■■□□ 2.87
OTUB1-212ENST00000543988 NLRP1Q9C000 1473 aa32.94■■■□□ 2.86
OTUB1-212ENST00000543988 GCC2Q8IWJ2 1684 aa32.94■■■□□ 2.86
OTUB1-212ENST00000543988 NUP155O75694 1391 aa32.9■■■□□ 2.86
OTUB1-212ENST00000543988 TET3O43151 1660 aa32.89■■■□□ 2.86
OTUB1-212ENST00000543988 IQGAP3Q86VI3 1631 aa32.89■■■□□ 2.86
OTUB1-212ENST00000543988 STRCQ7RTU9 1775 aa32.87■■■□□ 2.85
OTUB1-212ENST00000543988 PLA2R1Q13018 1463 aa32.86■■■□□ 2.85
OTUB1-212ENST00000543988 RPRD2Q5VT52 1461 aaKnown RBP32.86■■■□□ 2.85
OTUB1-212ENST00000543988 NOS1P29475 1434 aa32.84■■■□□ 2.85
OTUB1-212ENST00000543988 UGGT1Q9NYU2 1555 aa32.83■■■□□ 2.85
OTUB1-212ENST00000543988 SYNMO15061 1565 aa32.81■■■□□ 2.84
OTUB1-212ENST00000543988 CFAP65Q6ZU64 1925 aaKnown RBP32.79■■■□□ 2.84
OTUB1-212ENST00000543988 NCKAP5LQ9HCH0 1330 aa32.77■■■□□ 2.84
OTUB1-212ENST00000543988 E9PCH4 1651 aa32.75■■■□□ 2.83
OTUB1-212ENST00000543988 PTPRTO14522 1441 aa32.75■■■□□ 2.83
OTUB1-212ENST00000543988 THEMISQ8N1K5 641 aaPredicted RBP32.74■■■□□ 2.83
OTUB1-212ENST00000543988 DMRT2Q9Y5R5 561 aa32.74■■■□□ 2.83
OTUB1-212ENST00000543988 PKD2Q13563 968 aa32.72■■■□□ 2.83
OTUB1-212ENST00000543988 PIK3C2BO00750 1634 aa32.71■■■□□ 2.83
OTUB1-212ENST00000543988 UBR1Q8IWV7 1749 aa32.71■■■□□ 2.83
OTUB1-212ENST00000543988 IDI1Q13907 227 aa32.7■■■□□ 2.83
OTUB1-212ENST00000543988 TRIM52Q96A61 297 aa32.68■■■□□ 2.82
OTUB1-212ENST00000543988 SLC52A1Q9NWF4 448 aa32.66■■■□□ 2.82
OTUB1-212ENST00000543988 NEURL4Q96JN8 1562 aa32.66■■■□□ 2.82
OTUB1-212ENST00000543988 ADGRB3O60242 1522 aa32.64■■■□□ 2.82
OTUB1-212ENST00000543988 SETD5Q9C0A6 1442 aa32.63■■■□□ 2.81
OTUB1-212ENST00000543988 ANKLE2Q86XL3 938 aa32.63■■■□□ 2.81
OTUB1-212ENST00000543988 ARHGAP23Q9P227 1491 aa32.61■■■□□ 2.81
OTUB1-212ENST00000543988 POLR1AO95602 1720 aaPredicted RBP32.61■■■□□ 2.81
OTUB1-212ENST00000543988 STAG3Q9UJ98 1225 aa32.61■■■□□ 2.81
OTUB1-212ENST00000543988 SLIT1O75093 1534 aa32.61■■■□□ 2.81
OTUB1-212ENST00000543988 KDM5AP29375 1690 aaKnown RBP32.59■■■□□ 2.81
OTUB1-212ENST00000543988 TMEM2Q9UHN6 1383 aa32.58■■■□□ 2.81
OTUB1-212ENST00000543988 MED14O60244 1454 aa32.56■■■□□ 2.8
OTUB1-212ENST00000543988 SLC4A1APQ9BWU0 796 aaKnown RBP32.56■■■□□ 2.8
OTUB1-212ENST00000543988 SCAF11Q99590 1463 aaKnown RBP32.55■■■□□ 2.8
OTUB1-212ENST00000543988 NPHP4O75161 1426 aaPredicted RBP32.55■■■□□ 2.8
OTUB1-212ENST00000543988 RAB3GAP2Q9H2M9 1393 aa32.54■■■□□ 2.8
OTUB1-212ENST00000543988 SPHKAPQ2M3C7 1700 aa32.53■■■□□ 2.8
OTUB1-212ENST00000543988 LTKP29376 864 aa32.52■■■□□ 2.8
OTUB1-212ENST00000543988 TXNDC2Q86VQ3 553 aa32.5■■■□□ 2.79
OTUB1-212ENST00000543988 TMEM131LA2VDJ0 1609 aa32.5■■■□□ 2.79
OTUB1-212ENST00000543988 TRPM2O94759 1503 aa32.5■■■□□ 2.79
OTUB1-212ENST00000543988 EID1Q9Y6B2 187 aa32.47■■■□□ 2.79
OTUB1-212ENST00000543988 ZNF335Q9H4Z2 1342 aaPredicted RBP32.47■■■□□ 2.79
OTUB1-212ENST00000543988 IQGAP1P46940 1657 aa32.46■■■□□ 2.79
OTUB1-212ENST00000543988 CHGAP10645 457 aaKnown RBP32.46■■■□□ 2.79
OTUB1-212ENST00000543988 LTBP4Q8N2S1 1624 aa32.45■■■□□ 2.79
OTUB1-212ENST00000543988 ZFYVE9O95405 1425 aa32.43■■■□□ 2.78
OTUB1-212ENST00000543988 MPHOSPH9Q99550 1183 aa32.43■■■□□ 2.78
OTUB1-212ENST00000543988 ACIN1Q9UKV3 1341 aaKnown RBP32.43■■■□□ 2.78
OTUB1-212ENST00000543988 CLTCL1P53675 1640 aa32.43■■■□□ 2.78
OTUB1-212ENST00000543988 FOXD1Q16676 465 aa32.42■■■□□ 2.78
OTUB1-212ENST00000543988 RIMS2Q9UQ26 1411 aa32.41■■■□□ 2.78
OTUB1-212ENST00000543988 CERKQ8TCT0 537 aa32.4■■■□□ 2.78
OTUB1-212ENST00000543988 MYO5BQ9ULV0 1848 aa32.4■■■□□ 2.78
Retrieved 100 of 20,778 RNA–protein pairs in 152.9 ms