RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 DAPK1P53355 1430 aa15.85■□□□□ 0.13
NPIPB4-217ENST00000543449 KDM5DQ9BY66 1539 aa15.85■□□□□ 0.13
NPIPB4-217ENST00000543449 CLTCQ00610 1675 aaKnown RBP15.85■□□□□ 0.13
NPIPB4-217ENST00000543449 ANKRD30AQ9BXX3 1397 aa15.85■□□□□ 0.13
NPIPB4-217ENST00000543449 DNMT1P26358 1616 aaKnown RBP15.84■□□□□ 0.13
NPIPB4-217ENST00000543449 HSPA2P54652 639 aa15.84■□□□□ 0.13
NPIPB4-217ENST00000543449 ERBINQ96RT1 1412 aa15.84■□□□□ 0.13
NPIPB4-217ENST00000543449 KIF15Q9NS87 1388 aa15.83■□□□□ 0.12
NPIPB4-217ENST00000543449 PTPRKQ15262 1439 aa15.82■□□□□ 0.12
NPIPB4-217ENST00000543449 CROCC2H7BZ55 1655 aa15.82■□□□□ 0.12
NPIPB4-217ENST00000543449 FAM50AQ14320 339 aaKnown RBP15.81■□□□□ 0.12
NPIPB4-217ENST00000543449 RNF17Q9BXT8 1623 aaKnown RBP15.81■□□□□ 0.12
NPIPB4-217ENST00000543449 PZPP20742 1482 aa15.79■□□□□ 0.12
NPIPB4-217ENST00000543449 RRP7BPQ9NSQ0 103 aa15.79■□□□□ 0.12
NPIPB4-217ENST00000543449 ZC3H13Q5T200 1668 aaKnown RBP15.79■□□□□ 0.12
NPIPB4-217ENST00000543449 KANK1Q14678 1352 aa15.77■□□□□ 0.12
NPIPB4-217ENST00000543449 ADGRL2O95490 1459 aa15.77■□□□□ 0.11
NPIPB4-217ENST00000543449 TNRQ92752 1358 aa15.76■□□□□ 0.11
NPIPB4-217ENST00000543449 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.76■□□□□ 0.11
NPIPB4-217ENST00000543449 NCOA1Q15788 1441 aa15.76■□□□□ 0.11
NPIPB4-217ENST00000543449 PTPRTO14522 1441 aa15.75■□□□□ 0.11
NPIPB4-217ENST00000543449 ABCC3O15438 1527 aa15.74■□□□□ 0.11
NPIPB4-217ENST00000543449 ZNF142P52746 1687 aaPredicted RBP15.74■□□□□ 0.11
NPIPB4-217ENST00000543449 A2ML1A8K2U0 1454 aa15.74■□□□□ 0.11
NPIPB4-217ENST00000543449 PLA2R1Q13018 1463 aa15.74■□□□□ 0.11
NPIPB4-217ENST00000543449 PKD2Q13563 968 aa15.74■□□□□ 0.11
NPIPB4-217ENST00000543449 CHIC2Q9UKJ5 165 aa15.74■□□□□ 0.11
NPIPB4-217ENST00000543449 MYO3AQ8NEV4 1616 aa15.74■□□□□ 0.11
NPIPB4-217ENST00000543449 CEP170BQ9Y4F5 1589 aaPredicted RBP15.73■□□□□ 0.11
NPIPB4-217ENST00000543449 PRDM15P57071 1507 aaPredicted RBP15.73■□□□□ 0.11
NPIPB4-217ENST00000543449 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
NPIPB4-217ENST00000543449 ARHGAP31Q2M1Z3 1444 aa15.71■□□□□ 0.11
NPIPB4-217ENST00000543449 ROCK1Q13464 1354 aa15.71■□□□□ 0.11
NPIPB4-217ENST00000543449 CAMSAP1Q5T5Y3 1602 aa15.71■□□□□ 0.11
NPIPB4-217ENST00000543449 MROH1Q8NDA8 1641 aa15.7■□□□□ 0.1
NPIPB4-217ENST00000543449 ANKRD50Q9ULJ7 1429 aa15.69■□□□□ 0.1
NPIPB4-217ENST00000543449 FBXO31Q5XUX0 539 aaPredicted RBP15.69■□□□□ 0.1
NPIPB4-217ENST00000543449 THEMISQ8N1K5 641 aaPredicted RBP15.69■□□□□ 0.1
NPIPB4-217ENST00000543449 DEPDC5O75140 1603 aa15.68■□□□□ 0.1
NPIPB4-217ENST00000543449 STRCQ7RTU9 1775 aa15.68■□□□□ 0.1
NPIPB4-217ENST00000543449 SPATA31D1Q6ZQQ2 1576 aa15.68■□□□□ 0.1
NPIPB4-217ENST00000543449 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.68■□□□□ 0.1
NPIPB4-217ENST00000543449 FBXO41Q8TF61 875 aa15.67■□□□□ 0.1
NPIPB4-217ENST00000543449 LMTK2Q8IWU2 1503 aa15.67■□□□□ 0.1
NPIPB4-217ENST00000543449 ERVK-7P63135 1459 aa15.66■□□□□ 0.1
NPIPB4-217ENST00000543449 ILDR1Q86SU0 546 aaPredicted RBP15.64■□□□□ 0.09
NPIPB4-217ENST00000543449 UGGT1Q9NYU2 1555 aa15.64■□□□□ 0.09
NPIPB4-217ENST00000543449 CEP152O94986 1710 aa15.63■□□□□ 0.09
NPIPB4-217ENST00000543449 VWDEQ8N2E2 1590 aa15.63■□□□□ 0.09
NPIPB4-217ENST00000543449 RRBP1Q9P2E9 1410 aaKnown RBP15.63■□□□□ 0.09
NPIPB4-217ENST00000543449 ANKLE2Q86XL3 938 aa15.63■□□□□ 0.09
NPIPB4-217ENST00000543449 CERKQ8TCT0 537 aa15.63■□□□□ 0.09
NPIPB4-217ENST00000543449 PPARGC1BQ86YN6 1023 aaKnown RBP15.62■□□□□ 0.09
NPIPB4-217ENST00000543449 NCKAP5LQ9HCH0 1330 aa15.62■□□□□ 0.09
NPIPB4-217ENST00000543449 RPRD2Q5VT52 1461 aaKnown RBP15.61■□□□□ 0.09
NPIPB4-217ENST00000543449 ITGAEP38570 1179 aa15.59■□□□□ 0.09
NPIPB4-217ENST00000543449 IQSEC2Q5JU85 1478 aa15.58■□□□□ 0.08
NPIPB4-217ENST00000543449 EFCAB6Q5THR3 1501 aa15.58■□□□□ 0.08
NPIPB4-217ENST00000543449 SLC52A1Q9NWF4 448 aa15.57■□□□□ 0.08
NPIPB4-217ENST00000543449 STAG3Q9UJ98 1225 aa15.57■□□□□ 0.08
NPIPB4-217ENST00000543449 UNC13BO14795 1591 aa15.56■□□□□ 0.08
NPIPB4-217ENST00000543449 POLR1AO95602 1720 aaPredicted RBP15.55■□□□□ 0.08
NPIPB4-217ENST00000543449 MED14O60244 1454 aa15.55■□□□□ 0.08
NPIPB4-217ENST00000543449 NOS1P29475 1434 aa15.55■□□□□ 0.08
NPIPB4-217ENST00000543449 EID1Q9Y6B2 187 aa15.55■□□□□ 0.08
NPIPB4-217ENST00000543449 TET3O43151 1660 aa15.54■□□□□ 0.08
NPIPB4-217ENST00000543449 NPHP4O75161 1426 aaPredicted RBP15.53■□□□□ 0.08
NPIPB4-217ENST00000543449 KDM5AP29375 1690 aaKnown RBP15.53■□□□□ 0.08
NPIPB4-217ENST00000543449 NUP155O75694 1391 aa15.52■□□□□ 0.08
NPIPB4-217ENST00000543449 SLIT1O75093 1534 aa15.52■□□□□ 0.07
NPIPB4-217ENST00000543449 LTBP4Q8N2S1 1624 aa15.51■□□□□ 0.07
NPIPB4-217ENST00000543449 HDGFP51858 240 aaKnown RBP15.51■□□□□ 0.07
NPIPB4-217ENST00000543449 UBR1Q8IWV7 1749 aa15.51■□□□□ 0.07
NPIPB4-217ENST00000543449 GCC2Q8IWJ2 1684 aa15.51■□□□□ 0.07
NPIPB4-217ENST00000543449 IQGAP3Q86VI3 1631 aa15.5■□□□□ 0.07
NPIPB4-217ENST00000543449 NEURL4Q96JN8 1562 aa15.5■□□□□ 0.07
NPIPB4-217ENST00000543449 IDI1Q13907 227 aa15.5■□□□□ 0.07
NPIPB4-217ENST00000543449 SCAF11Q99590 1463 aaKnown RBP15.5■□□□□ 0.07
NPIPB4-217ENST00000543449 ARHGAP23Q9P227 1491 aa15.5■□□□□ 0.07
NPIPB4-217ENST00000543449 CFAP65Q6ZU64 1925 aaKnown RBP15.5■□□□□ 0.07
NPIPB4-217ENST00000543449 TMEM2Q9UHN6 1383 aa15.49■□□□□ 0.07
NPIPB4-217ENST00000543449 ZNF335Q9H4Z2 1342 aaPredicted RBP15.49■□□□□ 0.07
NPIPB4-217ENST00000543449 ACIN1Q9UKV3 1341 aaKnown RBP15.49■□□□□ 0.07
NPIPB4-217ENST00000543449 TXNDC2Q86VQ3 553 aa15.49■□□□□ 0.07
NPIPB4-217ENST00000543449 CPS1P31327 1500 aa15.48■□□□□ 0.07
NPIPB4-217ENST00000543449 PIK3C2BO00750 1634 aa15.47■□□□□ 0.07
NPIPB4-217ENST00000543449 HFM1A2PYH4 1435 aa15.47■□□□□ 0.07
NPIPB4-217ENST00000543449 SYNMO15061 1565 aa15.47■□□□□ 0.07
NPIPB4-217ENST00000543449 IQGAP1P46940 1657 aa15.47■□□□□ 0.07
NPIPB4-217ENST00000543449 NAIPQ13075 1403 aa15.46■□□□□ 0.07
NPIPB4-217ENST00000543449 ADGRB3O60242 1522 aa15.46■□□□□ 0.07
NPIPB4-217ENST00000543449 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.43■□□□□ 0.06
NPIPB4-217ENST00000543449 LTKP29376 864 aa15.42■□□□□ 0.06
NPIPB4-217ENST00000543449 E9PCH4 1651 aa15.41■□□□□ 0.06
NPIPB4-217ENST00000543449 TRIM52Q96A61 297 aa15.4■□□□□ 0.06
NPIPB4-217ENST00000543449 PPP1R15AO75807 674 aaPredicted RBP15.39■□□□□ 0.05
NPIPB4-217ENST00000543449 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
NPIPB4-217ENST00000543449 TOM1O60784 492 aa15.38■□□□□ 0.05
NPIPB4-217ENST00000543449 RIMS2Q9UQ26 1411 aa15.37■□□□□ 0.05
NPIPB4-217ENST00000543449 UBAP1LF5GYI3 381 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms