RNA–Protein interactions for RNA: ENST00000543025.5

KDM2B-216, Transcript of lysine demethylase 2B, humanhuman

TSL 1 (best)

Gene KDM2B, Length 2,522 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-216ENST00000543025 ANKRD30AQ9BXX3 1397 aa22.73■■□□□ 1.23
KDM2B-216ENST00000543025 PLEKHH2Q8IVE3 1493 aa22.71■■□□□ 1.23
KDM2B-216ENST00000543025 ARHGEF5Q12774 1597 aa22.7■■□□□ 1.22
KDM2B-216ENST00000543025 ARHGEF12Q9NZN5 1544 aa22.7■■□□□ 1.22
KDM2B-216ENST00000543025 PPP4R2Q9NY27 417 aa22.68■■□□□ 1.22
KDM2B-216ENST00000543025 USP47Q96K76 1375 aa22.68■■□□□ 1.22
KDM2B-216ENST00000543025 ANKRD50Q9ULJ7 1429 aa22.68■■□□□ 1.22
KDM2B-216ENST00000543025 PKD2Q13563 968 aa22.68■■□□□ 1.22
KDM2B-216ENST00000543025 HNRNPMP52272 730 aaKnown RBP eCLIP22.67■■□□□ 1.22
KDM2B-216ENST00000543025 ADGRL1O94910 1474 aa22.67■■□□□ 1.22
KDM2B-216ENST00000543025 NEO1Q92859 1461 aa22.67■■□□□ 1.22
KDM2B-216ENST00000543025 KDM5CP41229 1560 aa22.65■■□□□ 1.22
KDM2B-216ENST00000543025 CCDC141Q6ZP82 1450 aa22.65■■□□□ 1.22
KDM2B-216ENST00000543025 DHX29Q7Z478 1369 aaKnown RBP22.65■■□□□ 1.22
KDM2B-216ENST00000543025 ARID4BQ4LE39 1312 aaPredicted RBP22.65■■□□□ 1.22
KDM2B-216ENST00000543025 SHANK2Q9UPX8 1470 aa22.64■■□□□ 1.22
KDM2B-216ENST00000543025 BCORL1Q5H9F3 1711 aa22.64■■□□□ 1.22
KDM2B-216ENST00000543025 UHRF1BP1Q6BDS2 1440 aa22.62■■□□□ 1.21
KDM2B-216ENST00000543025 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
KDM2B-216ENST00000543025 SCAPERQ9BY12 1400 aa22.61■■□□□ 1.21
KDM2B-216ENST00000543025 TRAPPC8Q9Y2L5 1435 aa22.61■■□□□ 1.21
KDM2B-216ENST00000543025 C9orf84Q5VXU9 1444 aa22.6■■□□□ 1.21
KDM2B-216ENST00000543025 RALGAPBQ86X10 1494 aa22.59■■□□□ 1.21
KDM2B-216ENST00000543025 TRHP20396 242 aaPredicted RBP22.59■■□□□ 1.21
KDM2B-216ENST00000543025 FANCIQ9NVI1 1328 aa22.59■■□□□ 1.21
KDM2B-216ENST00000543025 NUP155O75694 1391 aa22.58■■□□□ 1.21
KDM2B-216ENST00000543025 KDM5DQ9BY66 1539 aa22.58■■□□□ 1.21
KDM2B-216ENST00000543025 RSPH4AQ5TD94 716 aa22.57■■□□□ 1.2
KDM2B-216ENST00000543025 ROCK2O75116 1388 aaKnown RBP22.57■■□□□ 1.2
KDM2B-216ENST00000543025 MAST1Q9Y2H9 1570 aa22.57■■□□□ 1.2
KDM2B-216ENST00000543025 POLR3GLQ9BT43 218 aa22.55■■□□□ 1.2
KDM2B-216ENST00000543025 POGZQ7Z3K3 1410 aa22.54■■□□□ 1.2
KDM2B-216ENST00000543025 RICTORQ6R327 1708 aa22.54■■□□□ 1.2
KDM2B-216ENST00000543025 SMG6Q86US8 1419 aaKnown RBP22.54■■□□□ 1.2
KDM2B-216ENST00000543025 ZNF518AQ6AHZ1 1483 aa22.53■■□□□ 1.2
KDM2B-216ENST00000543025 TSPY4P0CV99 314 aa22.53■■□□□ 1.2
KDM2B-216ENST00000543025 TSPY10P0CW01 314 aa22.53■■□□□ 1.2
KDM2B-216ENST00000543025 AFAP1Q8N556 730 aa22.53■■□□□ 1.2
KDM2B-216ENST00000543025 MSH5O43196 834 aa22.52■■□□□ 1.19
KDM2B-216ENST00000543025 INO80Q9ULG1 1556 aaPredicted RBP22.51■■□□□ 1.19
KDM2B-216ENST00000543025 CARD11Q9BXL7 1154 aa22.51■■□□□ 1.19
KDM2B-216ENST00000543025 FRMPD1Q5SYB0 1578 aa22.51■■□□□ 1.19
KDM2B-216ENST00000543025 ZFYVE16Q7Z3T8 1539 aa22.51■■□□□ 1.19
KDM2B-216ENST00000543025 B4GALNT3Q6L9W6 998 aa22.5■■□□□ 1.19
KDM2B-216ENST00000543025 PLXNC1O60486 1568 aa22.49■■□□□ 1.19
KDM2B-216ENST00000543025 KIF15Q9NS87 1388 aa22.49■■□□□ 1.19
KDM2B-216ENST00000543025 ATP7AQ04656 1500 aa22.48■■□□□ 1.19
KDM2B-216ENST00000543025 CNGB1Q14028 1251 aaPredicted RBP22.48■■□□□ 1.19
KDM2B-216ENST00000543025 NUDCQ9Y266 331 aa22.48■■□□□ 1.19
KDM2B-216ENST00000543025 SPAG9O60271 1321 aaKnown RBP22.47■■□□□ 1.19
KDM2B-216ENST00000543025 KIDINS220Q9ULH0 1771 aa22.47■■□□□ 1.19
KDM2B-216ENST00000543025 RAPGEF3O95398 923 aa22.47■■□□□ 1.19
KDM2B-216ENST00000543025 HECW2Q9P2P5 1572 aa22.46■■□□□ 1.19
KDM2B-216ENST00000543025 RTEL1-TNFRSF6BF6WH68 1400 aa22.45■■□□□ 1.19
KDM2B-216ENST00000543025 COL17A1Q9UMD9 1497 aaPredicted RBP22.44■■□□□ 1.18
KDM2B-216ENST00000543025 PNISRQ8TF01 805 aaKnown RBP22.43■■□□□ 1.18
KDM2B-216ENST00000543025 TMC1Q8TDI8 760 aa22.42■■□□□ 1.18
KDM2B-216ENST00000543025 RNF123Q5XPI4 1314 aa22.42■■□□□ 1.18
KDM2B-216ENST00000543025 MLH3Q9UHC1 1453 aa22.42■■□□□ 1.18
KDM2B-216ENST00000543025 ZMYM4Q5VZL5 1548 aa22.42■■□□□ 1.18
KDM2B-216ENST00000543025 ST20-MTHFSA0A0A6YYL1 179 aa22.41■■□□□ 1.18
KDM2B-216ENST00000543025 DCAF11Q8TEB1 546 aa22.41■■□□□ 1.18
KDM2B-216ENST00000543025 KDM2AQ9Y2K7 1162 aa22.41■■□□□ 1.18
KDM2B-216ENST00000543025 KTN1Q86UP2 1357 aaKnown RBP22.41■■□□□ 1.18
KDM2B-216ENST00000543025 FAM135AQ9P2D6 1515 aa22.4■■□□□ 1.18
KDM2B-216ENST00000543025 E9PCH4 1651 aa22.39■■□□□ 1.17
KDM2B-216ENST00000543025 ABCA6Q8N139 1617 aa22.38■■□□□ 1.17
KDM2B-216ENST00000543025 BRD4O60885 1362 aaPredicted RBP22.37■■□□□ 1.17
KDM2B-216ENST00000543025 ERICH6Q7L0X2 663 aa22.37■■□□□ 1.17
KDM2B-216ENST00000543025 MYT1LQ9UL68 1186 aa22.37■■□□□ 1.17
KDM2B-216ENST00000543025 DUOX2Q9NRD8 1548 aa22.37■■□□□ 1.17
KDM2B-216ENST00000543025 MYBBP1AQ9BQG0 1328 aaKnown RBP22.37■■□□□ 1.17
KDM2B-216ENST00000543025 RALBP1Q15311 655 aa22.36■■□□□ 1.17
KDM2B-216ENST00000543025 LRPPRCP42704 1394 aaKnown RBP22.36■■□□□ 1.17
KDM2B-216ENST00000543025 DIP2CQ9Y2E4 1556 aa22.34■■□□□ 1.17
KDM2B-216ENST00000543025 CCDC144AA2RUR9 1427 aa22.33■■□□□ 1.17
KDM2B-216ENST00000543025 TRPM1Q7Z4N2 1603 aa22.33■■□□□ 1.17
KDM2B-216ENST00000543025 YEATS2Q9ULM3 1422 aa22.32■■□□□ 1.16
KDM2B-216ENST00000543025 PRAG1Q86YV5 1406 aa22.32■■□□□ 1.16
KDM2B-216ENST00000543025 MAGI2Q86UL8 1455 aa22.31■■□□□ 1.16
KDM2B-216ENST00000543025 ERBINQ96RT1 1412 aa22.31■■□□□ 1.16
KDM2B-216ENST00000543025 UNC13BO14795 1591 aa22.29■■□□□ 1.16
KDM2B-216ENST00000543025 CCDC136Q96JN2 1154 aa22.29■■□□□ 1.16
KDM2B-216ENST00000543025 A2MP01023 1474 aa22.28■■□□□ 1.16
KDM2B-216ENST00000543025 ARHGEF40Q8TER5 1519 aa22.27■■□□□ 1.16
KDM2B-216ENST00000543025 EIF2AK4Q9P2K8 1649 aaKnown RBP22.27■■□□□ 1.15
KDM2B-216ENST00000543025 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
KDM2B-216ENST00000543025 SENP3-EIF4A1A0A087X0R7 540 aa22.24■■□□□ 1.15
KDM2B-216ENST00000543025 PARD3Q8TEW0 1356 aa22.24■■□□□ 1.15
KDM2B-216ENST00000543025 NLRP13Q86W25 1043 aa22.24■■□□□ 1.15
KDM2B-216ENST00000543025 LAMC1P11047 1609 aa22.23■■□□□ 1.15
KDM2B-216ENST00000543025 PLA2R1Q13018 1463 aa22.23■■□□□ 1.15
KDM2B-216ENST00000543025 DEPDC5O75140 1603 aa22.21■■□□□ 1.15
KDM2B-216ENST00000543025 IQGAP3Q86VI3 1631 aa22.21■■□□□ 1.15
KDM2B-216ENST00000543025 ATP10AO60312 1499 aa22.21■■□□□ 1.15
KDM2B-216ENST00000543025 RGL3Q3MIN7 710 aa22.21■■□□□ 1.15
KDM2B-216ENST00000543025 REREQ9P2R6 1566 aa22.2■■□□□ 1.15
KDM2B-216ENST00000543025 PRDM15P57071 1507 aaPredicted RBP22.2■■□□□ 1.14
KDM2B-216ENST00000543025 SIGLEC1Q9BZZ2 1709 aa22.2■■□□□ 1.14
KDM2B-216ENST00000543025 NBPF1Q3BBV0 1214 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms