RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 ROCK2O75116 1388 aaKnown RBP20.2■□□□□ 0.82
DDX55-209ENST00000542286 AFAP1Q8N556 730 aa20.2■□□□□ 0.82
DDX55-209ENST00000542286 PLA2R1Q13018 1463 aa20.19■□□□□ 0.82
DDX55-209ENST00000542286 CCDC144AA2RUR9 1427 aa20.18■□□□□ 0.82
DDX55-209ENST00000542286 RALGAPBQ86X10 1494 aa20.18■□□□□ 0.82
DDX55-209ENST00000542286 KDM5DQ9BY66 1539 aa20.17■□□□□ 0.82
DDX55-209ENST00000542286 UHRF1BP1Q6BDS2 1440 aa20.17■□□□□ 0.82
DDX55-209ENST00000542286 TRAPPC8Q9Y2L5 1435 aa20.16■□□□□ 0.82
DDX55-209ENST00000542286 POLR1AO95602 1720 aaPredicted RBP20.16■□□□□ 0.82
DDX55-209ENST00000542286 RSPH4AQ5TD94 716 aa20.14■□□□□ 0.82
DDX55-209ENST00000542286 MSH5O43196 834 aa20.14■□□□□ 0.81
DDX55-209ENST00000542286 MYO5CQ9NQX4 1742 aa20.13■□□□□ 0.81
DDX55-209ENST00000542286 ZCCHC11Q5TAX3 1644 aaKnown RBP20.13■□□□□ 0.81
DDX55-209ENST00000542286 EFCAB2Q5VUJ9 269 aa20.12■□□□□ 0.81
DDX55-209ENST00000542286 MYT1LQ9UL68 1186 aa20.12■□□□□ 0.81
DDX55-209ENST00000542286 SALL2Q9Y467 1007 aaPredicted RBP20.12■□□□□ 0.81
DDX55-209ENST00000542286 ZBED9Q6R2W3 1325 aa20.1■□□□□ 0.81
DDX55-209ENST00000542286 A2MP01023 1474 aa20.09■□□□□ 0.81
DDX55-209ENST00000542286 TMC1Q8TDI8 760 aa20.09■□□□□ 0.81
DDX55-209ENST00000542286 PLCH2O75038 1416 aa20.09■□□□□ 0.81
DDX55-209ENST00000542286 PRAG1Q86YV5 1406 aa20.09■□□□□ 0.81
DDX55-209ENST00000542286 B4GALNT3Q6L9W6 998 aa20.07■□□□□ 0.8
DDX55-209ENST00000542286 CLASP1Q7Z460 1538 aa20.05■□□□□ 0.8
DDX55-209ENST00000542286 SPAG9O60271 1321 aaKnown RBP20.05■□□□□ 0.8
DDX55-209ENST00000542286 PNISRQ8TF01 805 aaKnown RBP20.05■□□□□ 0.8
DDX55-209ENST00000542286 CC2D1BQ5T0F9 858 aaKnown RBP20.04■□□□□ 0.8
DDX55-209ENST00000542286 UNC13BO14795 1591 aa20.03■□□□□ 0.8
DDX55-209ENST00000542286 DISP3Q9P2K9 1392 aa20.03■□□□□ 0.8
DDX55-209ENST00000542286 MAST1Q9Y2H9 1570 aa20.02■□□□□ 0.8
DDX55-209ENST00000542286 TRPM1Q7Z4N2 1603 aa20■□□□□ 0.79
DDX55-209ENST00000542286 DUOX2Q9NRD8 1548 aa20■□□□□ 0.79
DDX55-209ENST00000542286 ABCC1P33527 1531 aa19.99■□□□□ 0.79
DDX55-209ENST00000542286 TESK2Q96S53 571 aa19.99■□□□□ 0.79
DDX55-209ENST00000542286 PLXNC1O60486 1568 aa19.98■□□□□ 0.79
DDX55-209ENST00000542286 ARID4BQ4LE39 1312 aaPredicted RBP19.98■□□□□ 0.79
DDX55-209ENST00000542286 IQGAP3Q86VI3 1631 aa19.98■□□□□ 0.79
DDX55-209ENST00000542286 FANCIQ9NVI1 1328 aa19.98■□□□□ 0.79
DDX55-209ENST00000542286 KIF3BO15066 747 aa19.97■□□□□ 0.79
DDX55-209ENST00000542286 ERICH6Q7L0X2 663 aa19.97■□□□□ 0.79
DDX55-209ENST00000542286 PANK3Q9H999 370 aa19.96■□□□□ 0.79
DDX55-209ENST00000542286 SCAPERQ9BY12 1400 aa19.95■□□□□ 0.78
DDX55-209ENST00000542286 ERBINQ96RT1 1412 aa19.94■□□□□ 0.78
DDX55-209ENST00000542286 MYBBP1AQ9BQG0 1328 aaKnown RBP19.94■□□□□ 0.78
DDX55-209ENST00000542286 PER1O15534 1290 aaPredicted RBP19.94■□□□□ 0.78
DDX55-209ENST00000542286 UHRF1BP1LA0JNW5 1464 aa19.93■□□□□ 0.78
DDX55-209ENST00000542286 PPP4R2Q9NY27 417 aa19.92■□□□□ 0.78
DDX55-209ENST00000542286 NUDCQ9Y266 331 aa19.91■□□□□ 0.78
DDX55-209ENST00000542286 FANCAO15360 1455 aa19.91■□□□□ 0.78
DDX55-209ENST00000542286 MAGI2Q86UL8 1455 aa19.9■□□□□ 0.78
DDX55-209ENST00000542286 ZFYVE16Q7Z3T8 1539 aa19.89■□□□□ 0.78
DDX55-209ENST00000542286 WDR7Q9Y4E6 1490 aa19.89■□□□□ 0.78
DDX55-209ENST00000542286 E9PCH4 1651 aa19.89■□□□□ 0.78
DDX55-209ENST00000542286 SENP3Q9H4L4 574 aaPredicted RBP19.89■□□□□ 0.77
DDX55-209ENST00000542286 GPRASP1Q5JY77 1395 aa19.89■□□□□ 0.77
DDX55-209ENST00000542286 RALBP1Q15311 655 aa19.88■□□□□ 0.77
DDX55-209ENST00000542286 KTN1Q86UP2 1357 aaKnown RBP19.88■□□□□ 0.77
DDX55-209ENST00000542286 UGGT1Q9NYU2 1555 aa19.88■□□□□ 0.77
DDX55-209ENST00000542286 ATP10AO60312 1499 aa19.87■□□□□ 0.77
DDX55-209ENST00000542286 SMG6Q86US8 1419 aaKnown RBP19.87■□□□□ 0.77
DDX55-209ENST00000542286 COL17A1Q9UMD9 1497 aaPredicted RBP19.86■□□□□ 0.77
DDX55-209ENST00000542286 PRDM15P57071 1507 aaPredicted RBP19.86■□□□□ 0.77
DDX55-209ENST00000542286 TMF1P82094 1093 aa19.86■□□□□ 0.77
DDX55-209ENST00000542286 CDCA7LQ96GN5 454 aa19.85■□□□□ 0.77
DDX55-209ENST00000542286 ASXL2Q76L83 1435 aa19.85■□□□□ 0.77
DDX55-209ENST00000542286 ADGRL1O94910 1474 aa19.85■□□□□ 0.77
DDX55-209ENST00000542286 BRD4O60885 1362 aaPredicted RBP19.85■□□□□ 0.77
DDX55-209ENST00000542286 NLRP13Q86W25 1043 aa19.84■□□□□ 0.77
DDX55-209ENST00000542286 LRPPRCP42704 1394 aaKnown RBP19.84■□□□□ 0.77
DDX55-209ENST00000542286 PARD3Q8TEW0 1356 aa19.84■□□□□ 0.77
DDX55-209ENST00000542286 CHGAP10645 457 aaKnown RBP19.83■□□□□ 0.77
DDX55-209ENST00000542286 CFAP70Q5T0N1 1121 aa19.82■□□□□ 0.76
DDX55-209ENST00000542286 CLTCL1P53675 1640 aa19.82■□□□□ 0.76
DDX55-209ENST00000542286 PRKCSHP14314 528 aaPredicted RBP19.82■□□□□ 0.76
DDX55-209ENST00000542286 ATP7AQ04656 1500 aa19.81■□□□□ 0.76
DDX55-209ENST00000542286 CFAP65Q6ZU64 1925 aaKnown RBP19.8■□□□□ 0.76
DDX55-209ENST00000542286 ADGRF5Q8IZF2 1346 aa19.79■□□□□ 0.76
DDX55-209ENST00000542286 GGT6Q6P531 493 aa19.79■□□□□ 0.76
DDX55-209ENST00000542286 DEKP35659 375 aaKnown RBP19.78■□□□□ 0.76
DDX55-209ENST00000542286 RTEL1-TNFRSF6BF6WH68 1400 aa19.77■□□□□ 0.76
DDX55-209ENST00000542286 NUTM2DQ5VT03 806 aaPredicted RBP19.77■□□□□ 0.76
DDX55-209ENST00000542286 MADDQ8WXG6 1647 aa19.77■□□□□ 0.75
DDX55-209ENST00000542286 TRPM2O94759 1503 aa19.75■□□□□ 0.75
DDX55-209ENST00000542286 ABCA9Q8IUA7 1624 aa19.75■□□□□ 0.75
DDX55-209ENST00000542286 KANK1Q14678 1352 aa19.75■□□□□ 0.75
DDX55-209ENST00000542286 SPHKAPQ2M3C7 1700 aa19.75■□□□□ 0.75
DDX55-209ENST00000542286 EIF2AK4Q9P2K8 1649 aaKnown RBP19.75■□□□□ 0.75
DDX55-209ENST00000542286 CCDC136Q96JN2 1154 aa19.74■□□□□ 0.75
DDX55-209ENST00000542286 INO80Q9ULG1 1556 aaPredicted RBP19.74■□□□□ 0.75
DDX55-209ENST00000542286 PLIN1O60240 522 aa19.73■□□□□ 0.75
DDX55-209ENST00000542286 ERICH6BQ5W0A0 696 aa19.73■□□□□ 0.75
DDX55-209ENST00000542286 PTPRTO14522 1441 aa19.73■□□□□ 0.75
DDX55-209ENST00000542286 RAPGEF3O95398 923 aa19.73■□□□□ 0.75
DDX55-209ENST00000542286 NPM1P06748 294 aaKnown RBP eCLIP19.73■□□□□ 0.75
DDX55-209ENST00000542286 ADAMTS8Q9UP79 889 aa19.73■□□□□ 0.75
DDX55-209ENST00000542286 KNSTRNQ9Y448 316 aa19.72■□□□□ 0.75
DDX55-209ENST00000542286 RNF17Q9BXT8 1623 aaKnown RBP19.72■□□□□ 0.75
DDX55-209ENST00000542286 OSCARQ8IYS5 282 aa19.72■□□□□ 0.75
DDX55-209ENST00000542286 EXOC6Q8TAG9 804 aa19.71■□□□□ 0.75
DDX55-209ENST00000542286 RNF123Q5XPI4 1314 aa19.71■□□□□ 0.75
DDX55-209ENST00000542286 LAMC1P11047 1609 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms