RNA–Protein interactions for RNA: ENST00000542179.1

LDHA-220, Transcript of lactate dehydrogenase A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDHA, Length 1,288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-220ENST00000542179 SYCP2Q9BX26 1530 aa13.72□□□□□ -0.21
LDHA-220ENST00000542179 ARHGEF12Q9NZN5 1544 aa13.72□□□□□ -0.21
LDHA-220ENST00000542179 NCOA1Q15788 1441 aa13.72□□□□□ -0.21
LDHA-220ENST00000542179 MAST1Q9Y2H9 1570 aa13.71□□□□□ -0.21
LDHA-220ENST00000542179 ZEB1P37275 1124 aaPredicted RBP13.71□□□□□ -0.21
LDHA-220ENST00000542179 MAP3K4Q9Y6R4 1608 aa13.71□□□□□ -0.22
LDHA-220ENST00000542179 CFAP74Q9C0B2 1584 aa13.71□□□□□ -0.22
LDHA-220ENST00000542179 ANKRD30AQ9BXX3 1397 aa13.71□□□□□ -0.22
LDHA-220ENST00000542179 C9orf84Q5VXU9 1444 aa13.7□□□□□ -0.22
LDHA-220ENST00000542179 RRP7BPQ9NSQ0 103 aa13.69□□□□□ -0.22
LDHA-220ENST00000542179 DIP2BQ9P265 1576 aa13.69□□□□□ -0.22
LDHA-220ENST00000542179 DHX57Q6P158 1386 aaKnown RBP13.69□□□□□ -0.22
LDHA-220ENST00000542179 CLSPNQ9HAW4 1339 aa13.68□□□□□ -0.22
LDHA-220ENST00000542179 NEO1Q92859 1461 aa13.67□□□□□ -0.22
LDHA-220ENST00000542179 ADGRL1O94910 1474 aa13.67□□□□□ -0.22
LDHA-220ENST00000542179 RTEL1-TNFRSF6BF6WH68 1400 aa13.65□□□□□ -0.22
LDHA-220ENST00000542179 SCAPERQ9BY12 1400 aa13.65□□□□□ -0.22
LDHA-220ENST00000542179 TRAPPC8Q9Y2L5 1435 aa13.65□□□□□ -0.22
LDHA-220ENST00000542179 FAM69CQ0P6D2 419 aa13.65□□□□□ -0.22
LDHA-220ENST00000542179 PLXNC1O60486 1568 aa13.64□□□□□ -0.23
LDHA-220ENST00000542179 SPDYE4A6NLX3 237 aa13.63□□□□□ -0.23
LDHA-220ENST00000542179 KDM6BO15054 1643 aa13.62□□□□□ -0.23
LDHA-220ENST00000542179 ANKRD50Q9ULJ7 1429 aa13.62□□□□□ -0.23
LDHA-220ENST00000542179 KIF15Q9NS87 1388 aa13.61□□□□□ -0.23
LDHA-220ENST00000542179 AFAP1Q8N556 730 aa13.61□□□□□ -0.23
LDHA-220ENST00000542179 SPAG9O60271 1321 aaKnown RBP13.61□□□□□ -0.23
LDHA-220ENST00000542179 ZNF518AQ6AHZ1 1483 aa13.61□□□□□ -0.23
LDHA-220ENST00000542179 KIF13AQ9H1H9 1805 aa13.6□□□□□ -0.23
LDHA-220ENST00000542179 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
LDHA-220ENST00000542179 TEX14Q8IWB6 1497 aa13.6□□□□□ -0.23
LDHA-220ENST00000542179 INO80Q9ULG1 1556 aaPredicted RBP13.59□□□□□ -0.23
LDHA-220ENST00000542179 POGZQ7Z3K3 1410 aa13.59□□□□□ -0.23
LDHA-220ENST00000542179 ZFYVE16Q7Z3T8 1539 aa13.59□□□□□ -0.23
LDHA-220ENST00000542179 DUOX2Q9NRD8 1548 aa13.59□□□□□ -0.23
LDHA-220ENST00000542179 KDM5CP41229 1560 aa13.58□□□□□ -0.23
LDHA-220ENST00000542179 PPRC1Q5VV67 1664 aaKnown RBP13.58□□□□□ -0.24
LDHA-220ENST00000542179 DENND4BO75064 1496 aaPredicted RBP13.57□□□□□ -0.24
LDHA-220ENST00000542179 MLH3Q9UHC1 1453 aa13.57□□□□□ -0.24
LDHA-220ENST00000542179 ATP7AQ04656 1500 aa13.57□□□□□ -0.24
LDHA-220ENST00000542179 ERBINQ96RT1 1412 aa13.56□□□□□ -0.24
LDHA-220ENST00000542179 PRKAR2AP13861 404 aaKnown RBP13.56□□□□□ -0.24
LDHA-220ENST00000542179 TRIM52Q96A61 297 aa13.55□□□□□ -0.24
LDHA-220ENST00000542179 KIDINS220Q9ULH0 1771 aa13.54□□□□□ -0.24
LDHA-220ENST00000542179 MPHOSPH9Q99550 1183 aa13.54□□□□□ -0.24
LDHA-220ENST00000542179 KDM5DQ9BY66 1539 aa13.54□□□□□ -0.24
LDHA-220ENST00000542179 RICTORQ6R327 1708 aa13.53□□□□□ -0.24
LDHA-220ENST00000542179 HAX1O00165 279 aa13.53□□□□□ -0.24
LDHA-220ENST00000542179 HECW2Q9P2P5 1572 aa13.52□□□□□ -0.25
LDHA-220ENST00000542179 TSPOAP1O95153 1857 aa13.51□□□□□ -0.25
LDHA-220ENST00000542179 UNC13BO14795 1591 aa13.51□□□□□ -0.25
LDHA-220ENST00000542179 PZPP20742 1482 aa13.51□□□□□ -0.25
LDHA-220ENST00000542179 DHX29Q7Z478 1369 aaKnown RBP13.51□□□□□ -0.25
LDHA-220ENST00000542179 RAPGEF3O95398 923 aa13.5□□□□□ -0.25
LDHA-220ENST00000542179 STAG3Q9UJ98 1225 aa13.5□□□□□ -0.25
LDHA-220ENST00000542179 ZMYM4Q5VZL5 1548 aa13.49□□□□□ -0.25
LDHA-220ENST00000542179 MAGI2Q86UL8 1455 aa13.49□□□□□ -0.25
LDHA-220ENST00000542179 NUP155O75694 1391 aa13.49□□□□□ -0.25
LDHA-220ENST00000542179 EIF2AK4Q9P2K8 1649 aaKnown RBP13.49□□□□□ -0.25
LDHA-220ENST00000542179 FRMPD1Q5SYB0 1578 aa13.49□□□□□ -0.25
LDHA-220ENST00000542179 TIMELESSQ9UNS1 1208 aa13.48□□□□□ -0.25
LDHA-220ENST00000542179 MYT1LQ9UL68 1186 aa13.47□□□□□ -0.25
LDHA-220ENST00000542179 A2MP01023 1474 aa13.47□□□□□ -0.25
LDHA-220ENST00000542179 DEPDC5O75140 1603 aa13.46□□□□□ -0.25
LDHA-220ENST00000542179 IQGAP3Q86VI3 1631 aa13.46□□□□□ -0.26
LDHA-220ENST00000542179 ABCA6Q8N139 1617 aa13.45□□□□□ -0.26
LDHA-220ENST00000542179 BCORL1Q5H9F3 1711 aa13.44□□□□□ -0.26
LDHA-220ENST00000542179 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
LDHA-220ENST00000542179 DIP2CQ9Y2E4 1556 aa13.44□□□□□ -0.26
LDHA-220ENST00000542179 ANKRD30BQ9BXX2 1392 aa13.44□□□□□ -0.26
LDHA-220ENST00000542179 SOCS7O14512 581 aa13.43□□□□□ -0.26
LDHA-220ENST00000542179 LMTK3Q96Q04 1460 aa13.42□□□□□ -0.26
LDHA-220ENST00000542179 COL17A1Q9UMD9 1497 aaPredicted RBP13.42□□□□□ -0.26
LDHA-220ENST00000542179 VWDEQ8N2E2 1590 aa13.42□□□□□ -0.26
LDHA-220ENST00000542179 PKD2Q13563 968 aa13.42□□□□□ -0.26
LDHA-220ENST00000542179 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
LDHA-220ENST00000542179 SIN3AQ96ST3 1273 aa13.42□□□□□ -0.26
LDHA-220ENST00000542179 PRDM15P57071 1507 aaPredicted RBP13.41□□□□□ -0.26
LDHA-220ENST00000542179 KIF3BO15066 747 aa13.41□□□□□ -0.26
LDHA-220ENST00000542179 SP7Q8TDD2 431 aaPredicted RBP13.41□□□□□ -0.26
LDHA-220ENST00000542179 RNF17Q9BXT8 1623 aaKnown RBP13.41□□□□□ -0.26
LDHA-220ENST00000542179 REREQ9P2R6 1566 aa13.41□□□□□ -0.26
LDHA-220ENST00000542179 YEATS2Q9ULM3 1422 aa13.4□□□□□ -0.26
LDHA-220ENST00000542179 ATP10AO60312 1499 aa13.4□□□□□ -0.26
LDHA-220ENST00000542179 MROH1Q8NDA8 1641 aa13.39□□□□□ -0.27
LDHA-220ENST00000542179 KANK1Q14678 1352 aa13.39□□□□□ -0.27
LDHA-220ENST00000542179 NEUROD1Q13562 356 aa13.38□□□□□ -0.27
LDHA-220ENST00000542179 RPRD2Q5VT52 1461 aaKnown RBP13.37□□□□□ -0.27
LDHA-220ENST00000542179 LMTK2Q8IWU2 1503 aa13.37□□□□□ -0.27
LDHA-220ENST00000542179 AGLP35573 1532 aa13.36□□□□□ -0.27
LDHA-220ENST00000542179 TET3O43151 1660 aa13.36□□□□□ -0.27
LDHA-220ENST00000542179 ARHGEF40Q8TER5 1519 aa13.34□□□□□ -0.27
LDHA-220ENST00000542179 TONSLQ96HA7 1378 aa13.34□□□□□ -0.27
LDHA-220ENST00000542179 E9PCH4 1651 aa13.32□□□□□ -0.28
LDHA-220ENST00000542179 PLA2R1Q13018 1463 aa13.32□□□□□ -0.28
LDHA-220ENST00000542179 PPP1R15AO75807 674 aaPredicted RBP13.32□□□□□ -0.28
LDHA-220ENST00000542179 PTPRTO14522 1441 aa13.3□□□□□ -0.28
LDHA-220ENST00000542179 EFCAB6Q5THR3 1501 aa13.3□□□□□ -0.28
LDHA-220ENST00000542179 GGT6Q6P531 493 aa13.3□□□□□ -0.28
LDHA-220ENST00000542179 ZC3H13Q5T200 1668 aaKnown RBP13.3□□□□□ -0.28
LDHA-220ENST00000542179 ABCC3O15438 1527 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms