RNA–Protein interactions for RNA: ENST00000542139.1

RAD9A-207, Transcript of RAD9 checkpoint clamp component A, humanhuman

TSL 4

Gene RAD9A, Length 578 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9A-207ENST00000542139 ANKLE2Q86XL3 938 aa24.77■■□□□ 1.56
RAD9A-207ENST00000542139 SENP3Q9H4L4 574 aaPredicted RBP24.74■■□□□ 1.55
RAD9A-207ENST00000542139 NEURL4Q96JN8 1562 aa24.74■■□□□ 1.55
RAD9A-207ENST00000542139 FBXO31Q5XUX0 539 aaPredicted RBP24.73■■□□□ 1.55
RAD9A-207ENST00000542139 THEMISQ8N1K5 641 aaPredicted RBP24.72■■□□□ 1.55
RAD9A-207ENST00000542139 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.71■■□□□ 1.55
RAD9A-207ENST00000542139 MTUS2Q5JR59 1369 aa24.69■■□□□ 1.54
RAD9A-207ENST00000542139 KIF3BO15066 747 aa24.69■■□□□ 1.54
RAD9A-207ENST00000542139 DHX29Q7Z478 1369 aaKnown RBP24.68■■□□□ 1.54
RAD9A-207ENST00000542139 WASHC2CQ9Y4E1 1318 aa24.67■■□□□ 1.54
RAD9A-207ENST00000542139 PZPP20742 1482 aa24.67■■□□□ 1.54
RAD9A-207ENST00000542139 NPHP4O75161 1426 aaPredicted RBP24.67■■□□□ 1.54
RAD9A-207ENST00000542139 VWDEQ8N2E2 1590 aa24.67■■□□□ 1.54
RAD9A-207ENST00000542139 ZNF644Q9H582 1327 aaPredicted RBP24.65■■□□□ 1.54
RAD9A-207ENST00000542139 RTEL1-TNFRSF6BF6WH68 1400 aa24.65■■□□□ 1.54
RAD9A-207ENST00000542139 KDM5DQ9BY66 1539 aa24.65■■□□□ 1.54
RAD9A-207ENST00000542139 FAM135AQ9P2D6 1515 aa24.65■■□□□ 1.54
RAD9A-207ENST00000542139 UGGT1Q9NYU2 1555 aa24.63■■□□□ 1.53
RAD9A-207ENST00000542139 NLRP1Q9C000 1473 aa24.62■■□□□ 1.53
RAD9A-207ENST00000542139 MIA2Q96PC5 1412 aa24.61■■□□□ 1.53
RAD9A-207ENST00000542139 MED14O60244 1454 aa24.6■■□□□ 1.53
RAD9A-207ENST00000542139 DEPDC5O75140 1603 aa24.6■■□□□ 1.53
RAD9A-207ENST00000542139 MBD5Q9P267 1494 aa24.59■■□□□ 1.53
RAD9A-207ENST00000542139 ALKQ9UM73 1620 aa24.59■■□□□ 1.53
RAD9A-207ENST00000542139 IQGAP1P46940 1657 aa24.57■■□□□ 1.52
RAD9A-207ENST00000542139 TIAM1Q13009 1591 aa24.56■■□□□ 1.52
RAD9A-207ENST00000542139 RNF17Q9BXT8 1623 aaKnown RBP24.55■■□□□ 1.52
RAD9A-207ENST00000542139 CHIC1Q5VXU3 224 aa24.55■■□□□ 1.52
RAD9A-207ENST00000542139 LRRC7Q96NW7 1537 aa24.55■■□□□ 1.52
RAD9A-207ENST00000542139 CCDC141Q6ZP82 1450 aa24.52■■□□□ 1.52
RAD9A-207ENST00000542139 SYNMO15061 1565 aa24.52■■□□□ 1.52
RAD9A-207ENST00000542139 EHBP1L1Q8N3D4 1523 aa24.51■■□□□ 1.51
RAD9A-207ENST00000542139 RSPH4AQ5TD94 716 aa24.5■■□□□ 1.51
RAD9A-207ENST00000542139 STRCP1A6NGW2 1772 aa24.48■■□□□ 1.51
RAD9A-207ENST00000542139 RGS17Q9UGC6 210 aaPredicted RBP24.47■■□□□ 1.51
RAD9A-207ENST00000542139 TSPY4P0CV99 314 aa24.46■■□□□ 1.51
RAD9A-207ENST00000542139 TSPY10P0CW01 314 aa24.46■■□□□ 1.51
RAD9A-207ENST00000542139 CEP162Q5TB80 1403 aa24.45■■□□□ 1.51
RAD9A-207ENST00000542139 CAMSAP2Q08AD1 1489 aa24.43■■□□□ 1.5
RAD9A-207ENST00000542139 SCAF11Q99590 1463 aaKnown RBP24.38■■□□□ 1.49
RAD9A-207ENST00000542139 ERVK-7P63135 1459 aa24.38■■□□□ 1.49
RAD9A-207ENST00000542139 ZC3H13Q5T200 1668 aaKnown RBP24.37■■□□□ 1.49
RAD9A-207ENST00000542139 ABCC3O15438 1527 aa24.37■■□□□ 1.49
RAD9A-207ENST00000542139 TXNDC2Q86VQ3 553 aa24.37■■□□□ 1.49
RAD9A-207ENST00000542139 POTEAQ6S8J7 498 aa24.35■■□□□ 1.49
RAD9A-207ENST00000542139 EID1Q9Y6B2 187 aa24.35■■□□□ 1.49
RAD9A-207ENST00000542139 NCOA2Q15596 1464 aa24.34■■□□□ 1.49
RAD9A-207ENST00000542139 ARHGEF5Q12774 1597 aa24.33■■□□□ 1.48
RAD9A-207ENST00000542139 UBR1Q8IWV7 1749 aa24.32■■□□□ 1.48
RAD9A-207ENST00000542139 FAM135BQ49AJ0 1406 aa24.32■■□□□ 1.48
RAD9A-207ENST00000542139 LTKP29376 864 aa24.31■■□□□ 1.48
RAD9A-207ENST00000542139 CFAP65Q6ZU64 1925 aaKnown RBP24.28■■□□□ 1.48
RAD9A-207ENST00000542139 STAG3Q9UJ98 1225 aa24.27■■□□□ 1.48
RAD9A-207ENST00000542139 XIRP1Q702N8 1843 aaKnown RBP24.26■■□□□ 1.47
RAD9A-207ENST00000542139 SLIT1O75093 1534 aa24.26■■□□□ 1.47
RAD9A-207ENST00000542139 EIF2AK4Q9P2K8 1649 aaKnown RBP24.26■■□□□ 1.47
RAD9A-207ENST00000542139 ARHGAP23Q9P227 1491 aa24.26■■□□□ 1.47
RAD9A-207ENST00000542139 CEP152O94986 1710 aa24.25■■□□□ 1.47
RAD9A-207ENST00000542139 TMEM94Q12767 1356 aa24.24■■□□□ 1.47
RAD9A-207ENST00000542139 MAST1Q9Y2H9 1570 aa24.21■■□□□ 1.47
RAD9A-207ENST00000542139 PROSER2Q86WR7 435 aaPredicted RBP24.21■■□□□ 1.47
RAD9A-207ENST00000542139 ROBO1Q9Y6N7 1651 aa24.21■■□□□ 1.47
RAD9A-207ENST00000542139 MROH1Q8NDA8 1641 aa24.19■■□□□ 1.46
RAD9A-207ENST00000542139 LRRC9Q6ZRR7 1453 aa24.19■■□□□ 1.46
RAD9A-207ENST00000542139 KCNA6P17658 529 aa24.18■■□□□ 1.46
RAD9A-207ENST00000542139 TMEM2Q9UHN6 1383 aa24.17■■□□□ 1.46
RAD9A-207ENST00000542139 SETD1AO15047 1707 aaKnown RBP24.16■■□□□ 1.46
RAD9A-207ENST00000542139 RBM33Q96EV2 1170 aaKnown RBP24.16■■□□□ 1.46
RAD9A-207ENST00000542139 ARHGAP31Q2M1Z3 1444 aa24.16■■□□□ 1.46
RAD9A-207ENST00000542139 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
RAD9A-207ENST00000542139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.14■■□□□ 1.45
RAD9A-207ENST00000542139 PIK3C2BO00750 1634 aa24.13■■□□□ 1.45
RAD9A-207ENST00000542139 BCANQ96GW7 911 aa24.13■■□□□ 1.45
RAD9A-207ENST00000542139 SLC26A8Q96RN1 970 aa24.13■■□□□ 1.45
RAD9A-207ENST00000542139 MSH6P52701 1360 aa24.13■■□□□ 1.45
RAD9A-207ENST00000542139 JCADQ9P266 1359 aa24.13■■□□□ 1.45
RAD9A-207ENST00000542139 MAP3K1Q13233 1512 aa24.1■■□□□ 1.45
RAD9A-207ENST00000542139 EFCAB6Q5THR3 1501 aa24.1■■□□□ 1.45
RAD9A-207ENST00000542139 KANK1Q14678 1352 aa24.09■■□□□ 1.45
RAD9A-207ENST00000542139 MEX3CQ5U5Q3 659 aaKnown RBP24.09■■□□□ 1.45
RAD9A-207ENST00000542139 PHLPP1O60346 1717 aa24.09■■□□□ 1.45
RAD9A-207ENST00000542139 SLAIN2Q9P270 581 aa24.08■■□□□ 1.45
RAD9A-207ENST00000542139 PRDM15P57071 1507 aaPredicted RBP24.08■■□□□ 1.45
RAD9A-207ENST00000542139 NKTRP30414 1462 aaKnown RBP24.07■■□□□ 1.44
RAD9A-207ENST00000542139 KIF15Q9NS87 1388 aa24.07■■□□□ 1.44
RAD9A-207ENST00000542139 MYOM3Q5VTT5 1437 aa24.07■■□□□ 1.44
RAD9A-207ENST00000542139 ERBINQ96RT1 1412 aa24.05■■□□□ 1.44
RAD9A-207ENST00000542139 IDI1Q13907 227 aa24.05■■□□□ 1.44
RAD9A-207ENST00000542139 RRP7BPQ9NSQ0 103 aa24.05■■□□□ 1.44
RAD9A-207ENST00000542139 ZNF772Q68DY9 489 aaPredicted RBP24.04■■□□□ 1.44
RAD9A-207ENST00000542139 TRIM52Q96A61 297 aa24.04■■□□□ 1.44
RAD9A-207ENST00000542139 KDM5AP29375 1690 aaKnown RBP24.03■■□□□ 1.44
RAD9A-207ENST00000542139 UPF1Q92900 1129 aaKnown RBP eCLIP24.03■■□□□ 1.44
RAD9A-207ENST00000542139 TET3O43151 1660 aa24.02■■□□□ 1.44
RAD9A-207ENST00000542139 NWD1Q149M9 1564 aa24■■□□□ 1.43
RAD9A-207ENST00000542139 SPATA31A6Q5VVP1 1343 aa24■■□□□ 1.43
RAD9A-207ENST00000542139 C14orf37Q86TY3 774 aa23.99■■□□□ 1.43
RAD9A-207ENST00000542139 ADGRB3O60242 1522 aa23.95■■□□□ 1.43
RAD9A-207ENST00000542139 PPP1R15AO75807 674 aaPredicted RBP23.95■■□□□ 1.42
RAD9A-207ENST00000542139 FGD6Q6ZV73 1430 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms