RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 HSPA2P54652 639 aa14.96□□□□□ -0.01
YBX3-212ENST00000542002 CNTLNQ9NXG0 1405 aa14.96□□□□□ -0.01
YBX3-212ENST00000542002 LMTK3Q96Q04 1460 aa14.95□□□□□ -0.02
YBX3-212ENST00000542002 ITGAEP38570 1179 aa14.95□□□□□ -0.02
YBX3-212ENST00000542002 WASHC2CQ9Y4E1 1318 aa14.94□□□□□ -0.02
YBX3-212ENST00000542002 FBXO31Q5XUX0 539 aaPredicted RBP14.94□□□□□ -0.02
YBX3-212ENST00000542002 ANKRD30AQ9BXX3 1397 aa14.94□□□□□ -0.02
YBX3-212ENST00000542002 DUOX2Q9NRD8 1548 aa14.93□□□□□ -0.02
YBX3-212ENST00000542002 CROCC2H7BZ55 1655 aa14.93□□□□□ -0.02
YBX3-212ENST00000542002 C3P01024 1663 aa14.92□□□□□ -0.02
YBX3-212ENST00000542002 ADGRL2O95490 1459 aa14.91□□□□□ -0.02
YBX3-212ENST00000542002 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.91□□□□□ -0.02
YBX3-212ENST00000542002 ADRA2BP18089 450 aa14.91□□□□□ -0.02
YBX3-212ENST00000542002 RRBP1Q9P2E9 1410 aaKnown RBP14.91□□□□□ -0.02
YBX3-212ENST00000542002 CLTCQ00610 1675 aaKnown RBP14.9□□□□□ -0.02
YBX3-212ENST00000542002 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.021e-9■■□□□ 14.4
YBX3-212ENST00000542002 ERBINQ96RT1 1412 aa14.89□□□□□ -0.03
YBX3-212ENST00000542002 MROH1Q8NDA8 1641 aa14.88□□□□□ -0.03
YBX3-212ENST00000542002 NPATQ14207 1427 aa14.87□□□□□ -0.03
YBX3-212ENST00000542002 RNF17Q9BXT8 1623 aaKnown RBP14.86□□□□□ -0.03
YBX3-212ENST00000542002 MROH2AA6NES4 1674 aa14.86□□□□□ -0.03
YBX3-212ENST00000542002 ABCC3O15438 1527 aa14.86□□□□□ -0.03
YBX3-212ENST00000542002 KDM5DQ9BY66 1539 aa14.86□□□□□ -0.03
YBX3-212ENST00000542002 ROCK1Q13464 1354 aa14.85□□□□□ -0.03
YBX3-212ENST00000542002 ANKRD50Q9ULJ7 1429 aa14.85□□□□□ -0.03
YBX3-212ENST00000542002 EIF2AK4Q9P2K8 1649 aaKnown RBP14.84□□□□□ -0.03
YBX3-212ENST00000542002 UHRF1BP1Q6BDS2 1440 aa14.84□□□□□ -0.03
YBX3-212ENST00000542002 PZPP20742 1482 aa14.82□□□□□ -0.04
YBX3-212ENST00000542002 TNRQ92752 1358 aa14.81□□□□□ -0.04
YBX3-212ENST00000542002 FAM135AQ9P2D6 1515 aa14.81□□□□□ -0.04
YBX3-212ENST00000542002 PREX1Q8TCU6 1659 aa14.81□□□□□ -0.04
YBX3-212ENST00000542002 SETD1BQ9UPS6 1966 aaKnown RBP14.8□□□□□ -0.04
YBX3-212ENST00000542002 PRDM15P57071 1507 aaPredicted RBP14.8□□□□□ -0.04
YBX3-212ENST00000542002 DEPDC5O75140 1603 aa14.78□□□□□ -0.04
YBX3-212ENST00000542002 VWDEQ8N2E2 1590 aa14.78□□□□□ -0.04
YBX3-212ENST00000542002 KANK1Q14678 1352 aa14.78□□□□□ -0.04
YBX3-212ENST00000542002 ARHGAP31Q2M1Z3 1444 aa14.77□□□□□ -0.04
YBX3-212ENST00000542002 NCKAP5LQ9HCH0 1330 aa14.76□□□□□ -0.05
YBX3-212ENST00000542002 LMTK2Q8IWU2 1503 aa14.76□□□□□ -0.05
YBX3-212ENST00000542002 NAIPQ13075 1403 aa14.75□□□□□ -0.05
YBX3-212ENST00000542002 CEP152O94986 1710 aa14.75□□□□□ -0.05
YBX3-212ENST00000542002 ERVK-7P63135 1459 aa14.75□□□□□ -0.05
YBX3-212ENST00000542002 A2ML1A8K2U0 1454 aa14.74□□□□□ -0.05
YBX3-212ENST00000542002 ZC3H13Q5T200 1668 aaKnown RBP14.74□□□□□ -0.05
YBX3-212ENST00000542002 CAMSAP1Q5T5Y3 1602 aa14.74□□□□□ -0.05
YBX3-212ENST00000542002 MYO3AQ8NEV4 1616 aa14.74□□□□□ -0.05
YBX3-212ENST00000542002 NUP155O75694 1391 aa14.73□□□□□ -0.05
YBX3-212ENST00000542002 SPATA31D1Q6ZQQ2 1576 aa14.73□□□□□ -0.05
YBX3-212ENST00000542002 STRCQ7RTU9 1775 aa14.73□□□□□ -0.05
YBX3-212ENST00000542002 CEP170BQ9Y4F5 1589 aaPredicted RBP14.73□□□□□ -0.05
YBX3-212ENST00000542002 IDI1Q13907 227 aa14.72□□□□□ -0.05
YBX3-212ENST00000542002 NLRP1Q9C000 1473 aa14.7□□□□□ -0.06
YBX3-212ENST00000542002 HFM1A2PYH4 1435 aa14.7□□□□□ -0.06
YBX3-212ENST00000542002 THEMISQ8N1K5 641 aaPredicted RBP14.7□□□□□ -0.06
YBX3-212ENST00000542002 UNC13BO14795 1591 aa14.69□□□□□ -0.06
YBX3-212ENST00000542002 NOS1P29475 1434 aa14.69□□□□□ -0.06
YBX3-212ENST00000542002 DMRT2Q9Y5R5 561 aa14.69□□□□□ -0.06
YBX3-212ENST00000542002 EFCAB6Q5THR3 1501 aa14.68□□□□□ -0.06
YBX3-212ENST00000542002 PKD2Q13563 968 aa14.68□□□□□ -0.06
YBX3-212ENST00000542002 ZNF142P52746 1687 aaPredicted RBP14.68□□□□□ -0.06
YBX3-212ENST00000542002 CFAP65Q6ZU64 1925 aaKnown RBP14.67□□□□□ -0.06
YBX3-212ENST00000542002 PLA2R1Q13018 1463 aa14.67□□□□□ -0.06
YBX3-212ENST00000542002 PTPRTO14522 1441 aa14.66□□□□□ -0.06
YBX3-212ENST00000542002 UGGT1Q9NYU2 1555 aa14.66□□□□□ -0.06
YBX3-212ENST00000542002 LTKP29376 864 aa14.65□□□□□ -0.06
YBX3-212ENST00000542002 ANKLE2Q86XL3 938 aa14.65□□□□□ -0.06
YBX3-212ENST00000542002 SYNMO15061 1565 aa14.64□□□□□ -0.07
YBX3-212ENST00000542002 TRIM52Q96A61 297 aa14.64□□□□□ -0.07
YBX3-212ENST00000542002 SLC52A1Q9NWF4 448 aa14.64□□□□□ -0.07
YBX3-212ENST00000542002 RPRD2Q5VT52 1461 aaKnown RBP14.63□□□□□ -0.07
YBX3-212ENST00000542002 IQGAP3Q86VI3 1631 aa14.63□□□□□ -0.07
YBX3-212ENST00000542002 TET3O43151 1660 aa14.62□□□□□ -0.07
YBX3-212ENST00000542002 TXNDC2Q86VQ3 553 aa14.61□□□□□ -0.07
YBX3-212ENST00000542002 STAG3Q9UJ98 1225 aa14.6□□□□□ -0.07
YBX3-212ENST00000542002 E9PCH4 1651 aa14.6□□□□□ -0.07
YBX3-212ENST00000542002 ZNF335Q9H4Z2 1342 aaPredicted RBP14.6□□□□□ -0.07
YBX3-212ENST00000542002 GCC2Q8IWJ2 1684 aa14.59□□□□□ -0.07
YBX3-212ENST00000542002 UBR1Q8IWV7 1749 aa14.59□□□□□ -0.07
YBX3-212ENST00000542002 CERKQ8TCT0 537 aa14.59□□□□□ -0.07
YBX3-212ENST00000542002 NEURL4Q96JN8 1562 aa14.59□□□□□ -0.07
YBX3-212ENST00000542002 PIK3C2BO00750 1634 aa14.59□□□□□ -0.07
YBX3-212ENST00000542002 TMEM2Q9UHN6 1383 aa14.59□□□□□ -0.07
YBX3-212ENST00000542002 ARHGAP23Q9P227 1491 aa14.58□□□□□ -0.08
YBX3-212ENST00000542002 ILDR1Q86SU0 546 aaPredicted RBP14.58□□□□□ -0.08
YBX3-212ENST00000542002 SLC4A1APQ9BWU0 796 aaKnown RBP14.58□□□□□ -0.08
YBX3-212ENST00000542002 SETD5Q9C0A6 1442 aa14.58□□□□□ -0.08
YBX3-212ENST00000542002 MED14O60244 1454 aa14.57□□□□□ -0.08
YBX3-212ENST00000542002 NPHP4O75161 1426 aaPredicted RBP14.57□□□□□ -0.08
YBX3-212ENST00000542002 SLIT1O75093 1534 aa14.56□□□□□ -0.08
YBX3-212ENST00000542002 MPHOSPH9Q99550 1183 aa14.56□□□□□ -0.08
YBX3-212ENST00000542002 CHGAP10645 457 aaKnown RBP14.55□□□□□ -0.08
YBX3-212ENST00000542002 EID1Q9Y6B2 187 aa14.55□□□□□ -0.08
YBX3-212ENST00000542002 LTBP4Q8N2S1 1624 aa14.55□□□□□ -0.08
YBX3-212ENST00000542002 NUTM2DQ5VT03 806 aaPredicted RBP14.54□□□□□ -0.08
YBX3-212ENST00000542002 RAB3GAP2Q9H2M9 1393 aa14.54□□□□□ -0.08
YBX3-212ENST00000542002 SCAF11Q99590 1463 aaKnown RBP14.54□□□□□ -0.08
YBX3-212ENST00000542002 ADGRB3O60242 1522 aa14.52□□□□□ -0.08
YBX3-212ENST00000542002 TMEM131LA2VDJ0 1609 aa14.52□□□□□ -0.09
YBX3-212ENST00000542002 ZFYVE9O95405 1425 aa14.51□□□□□ -0.09
YBX3-212ENST00000542002 SLC26A8Q96RN1 970 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms