RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 EIF2AK4Q9P2K8 1649 aaKnown RBP13.81□□□□□ -0.2
PXN-209ENST00000540221 WASHC2CQ9Y4E1 1318 aa13.8□□□□□ -0.2
PXN-209ENST00000540221 ZMYM3Q14202 1370 aa13.8□□□□□ -0.2
PXN-209ENST00000540221 NPATQ14207 1427 aa13.78□□□□□ -0.2
PXN-209ENST00000540221 MROH2AA6NES4 1674 aa13.77□□□□□ -0.21
PXN-209ENST00000540221 KANK1Q14678 1352 aa13.77□□□□□ -0.21
PXN-209ENST00000540221 KDM5DQ9BY66 1539 aa13.77□□□□□ -0.21
PXN-209ENST00000540221 RNF17Q9BXT8 1623 aaKnown RBP13.76□□□□□ -0.21
PXN-209ENST00000540221 ANKRD50Q9ULJ7 1429 aa13.76□□□□□ -0.21
PXN-209ENST00000540221 CEBPAP49715 358 aaPredicted RBP13.76□□□□□ -0.21
PXN-209ENST00000540221 PTPRKQ15262 1439 aa13.75□□□□□ -0.21
PXN-209ENST00000540221 PLPPR3Q6T4P5 718 aa13.75□□□□□ -0.21
PXN-209ENST00000540221 ITGAEP38570 1179 aa13.74□□□□□ -0.21
PXN-209ENST00000540221 UHRF1BP1Q6BDS2 1440 aa13.73□□□□□ -0.21
PXN-209ENST00000540221 PRDM15P57071 1507 aaPredicted RBP13.72□□□□□ -0.21
PXN-209ENST00000540221 PZPP20742 1482 aa13.72□□□□□ -0.21
PXN-209ENST00000540221 ZC3H13Q5T200 1668 aaKnown RBP13.72□□□□□ -0.21
PXN-209ENST00000540221 C3P01024 1663 aa13.71□□□□□ -0.21
PXN-209ENST00000540221 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.21
PXN-209ENST00000540221 ABCC3O15438 1527 aa13.7□□□□□ -0.22
PXN-209ENST00000540221 LMTK3Q96Q04 1460 aa13.7□□□□□ -0.22
PXN-209ENST00000540221 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.7□□□□□ -0.22
PXN-209ENST00000540221 ARHGAP31Q2M1Z3 1444 aa13.7□□□□□ -0.22
PXN-209ENST00000540221 DEPDC5O75140 1603 aa13.69□□□□□ -0.22
PXN-209ENST00000540221 SETD1BQ9UPS6 1966 aaKnown RBP13.69□□□□□ -0.22
PXN-209ENST00000540221 MROH1Q8NDA8 1641 aa13.68□□□□□ -0.22
PXN-209ENST00000540221 ACIN1Q9UKV3 1341 aaKnown RBP13.68□□□□□ -0.22
PXN-209ENST00000540221 LMTK2Q8IWU2 1503 aa13.68□□□□□ -0.22
PXN-209ENST00000540221 PREX1Q8TCU6 1659 aa13.67□□□□□ -0.22
PXN-209ENST00000540221 TNRQ92752 1358 aa13.67□□□□□ -0.22
PXN-209ENST00000540221 HFM1A2PYH4 1435 aa13.66□□□□□ -0.22
PXN-209ENST00000540221 VWDEQ8N2E2 1590 aa13.66□□□□□ -0.22
PXN-209ENST00000540221 NLRP1Q9C000 1473 aa13.64□□□□□ -0.23
PXN-209ENST00000540221 FBXO31Q5XUX0 539 aaPredicted RBP13.64□□□□□ -0.23
PXN-209ENST00000540221 DMRT2Q9Y5R5 561 aa13.64□□□□□ -0.23
PXN-209ENST00000540221 NAIPQ13075 1403 aa13.64□□□□□ -0.23
PXN-209ENST00000540221 RPRD2Q5VT52 1461 aaKnown RBP13.63□□□□□ -0.23
PXN-209ENST00000540221 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
PXN-209ENST00000540221 ERVK-7P63135 1459 aa13.62□□□□□ -0.23
PXN-209ENST00000540221 NUP155O75694 1391 aa13.62□□□□□ -0.23
PXN-209ENST00000540221 UNC13BO14795 1591 aa13.62□□□□□ -0.23
PXN-209ENST00000540221 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
PXN-209ENST00000540221 CAMSAP1Q5T5Y3 1602 aa13.61□□□□□ -0.23
PXN-209ENST00000540221 HSPA2P54652 639 aa13.61□□□□□ -0.23
PXN-209ENST00000540221 THEMISQ8N1K5 641 aaPredicted RBP13.61□□□□□ -0.23
PXN-209ENST00000540221 EFCAB6Q5THR3 1501 aa13.59□□□□□ -0.23
PXN-209ENST00000540221 CEP170BQ9Y4F5 1589 aaPredicted RBP13.59□□□□□ -0.23
PXN-209ENST00000540221 PKD2Q13563 968 aa13.59□□□□□ -0.23
PXN-209ENST00000540221 SLC52A1Q9NWF4 448 aa13.59□□□□□ -0.23
PXN-209ENST00000540221 MYO3AQ8NEV4 1616 aa13.59□□□□□ -0.23
PXN-209ENST00000540221 PLA2R1Q13018 1463 aa13.58□□□□□ -0.24
PXN-209ENST00000540221 CEP152O94986 1710 aa13.58□□□□□ -0.24
PXN-209ENST00000540221 ZNF142P52746 1687 aaPredicted RBP13.57□□□□□ -0.24
PXN-209ENST00000540221 GCC2Q8IWJ2 1684 aa13.57□□□□□ -0.24
PXN-209ENST00000540221 IQGAP3Q86VI3 1631 aa13.57□□□□□ -0.24
PXN-209ENST00000540221 TET3O43151 1660 aa13.56□□□□□ -0.24
PXN-209ENST00000540221 NOS1P29475 1434 aa13.56□□□□□ -0.24
PXN-209ENST00000540221 UGGT1Q9NYU2 1555 aa13.55□□□□□ -0.24
PXN-209ENST00000540221 TRIM52Q96A61 297 aa13.54□□□□□ -0.24
PXN-209ENST00000540221 PTPRTO14522 1441 aa13.54□□□□□ -0.24
PXN-209ENST00000540221 SETD5Q9C0A6 1442 aa13.54□□□□□ -0.24
PXN-209ENST00000540221 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
PXN-209ENST00000540221 STAG3Q9UJ98 1225 aa13.53□□□□□ -0.24
PXN-209ENST00000540221 HRCP23327 699 aa13.52□□□□□ -0.25
PXN-209ENST00000540221 IDI1Q13907 227 aa13.52□□□□□ -0.25
PXN-209ENST00000540221 SLC4A1APQ9BWU0 796 aaKnown RBP13.51□□□□□ -0.25
PXN-209ENST00000540221 HDGFP51858 240 aaKnown RBP13.5□□□□□ -0.25
PXN-209ENST00000540221 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
PXN-209ENST00000540221 KDM5AP29375 1690 aaKnown RBP13.48□□□□□ -0.25
PXN-209ENST00000540221 SYNMO15061 1565 aa13.48□□□□□ -0.25
PXN-209ENST00000540221 NCKAP5LQ9HCH0 1330 aa13.47□□□□□ -0.25
PXN-209ENST00000540221 TMEM2Q9UHN6 1383 aa13.46□□□□□ -0.25
PXN-209ENST00000540221 SLIT1O75093 1534 aa13.46□□□□□ -0.25
PXN-209ENST00000540221 MED14O60244 1454 aa13.46□□□□□ -0.25
PXN-209ENST00000540221 ARHGAP23Q9P227 1491 aa13.46□□□□□ -0.25
PXN-209ENST00000540221 E9PCH4 1651 aa13.46□□□□□ -0.26
PXN-209ENST00000540221 RAB3GAP2Q9H2M9 1393 aa13.45□□□□□ -0.26
PXN-209ENST00000540221 STRCQ7RTU9 1775 aa13.45□□□□□ -0.26
PXN-209ENST00000540221 MPHOSPH9Q99550 1183 aa13.45□□□□□ -0.26
PXN-209ENST00000540221 ADGRB3O60242 1522 aa13.44□□□□□ -0.26
PXN-209ENST00000540221 SCAF11Q99590 1463 aaKnown RBP13.44□□□□□ -0.26
PXN-209ENST00000540221 TXNDC2Q86VQ3 553 aa13.44□□□□□ -0.26
PXN-209ENST00000540221 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.44□□□□□ -0.26
PXN-209ENST00000540221 UBR1Q8IWV7 1749 aa13.44□□□□□ -0.26
PXN-209ENST00000540221 PIK3C2BO00750 1634 aa13.43□□□□□ -0.26
PXN-209ENST00000540221 NPHP4O75161 1426 aaPredicted RBP13.43□□□□□ -0.26
PXN-209ENST00000540221 TRPM2O94759 1503 aa13.42□□□□□ -0.26
PXN-209ENST00000540221 CHGAP10645 457 aaKnown RBP13.41□□□□□ -0.26
PXN-209ENST00000540221 CFAP65Q6ZU64 1925 aaKnown RBP13.41□□□□□ -0.26
PXN-209ENST00000540221 LTKP29376 864 aa13.4□□□□□ -0.26
PXN-209ENST00000540221 PPP1R15AO75807 674 aaPredicted RBP13.39□□□□□ -0.27
PXN-209ENST00000540221 TRIM26Q12899 539 aaPredicted RBP13.39□□□□□ -0.27
PXN-209ENST00000540221 NEURL4Q96JN8 1562 aa13.39□□□□□ -0.27
PXN-209ENST00000540221 POLR1AO95602 1720 aaPredicted RBP13.39□□□□□ -0.27
PXN-209ENST00000540221 SPHKAPQ2M3C7 1700 aa13.39□□□□□ -0.27
PXN-209ENST00000540221 TMEM131LA2VDJ0 1609 aa13.38□□□□□ -0.27
PXN-209ENST00000540221 CCDC144AA2RUR9 1427 aa13.38□□□□□ -0.27
PXN-209ENST00000540221 ZFYVE9O95405 1425 aa13.38□□□□□ -0.27
PXN-209ENST00000540221 RIMS2Q9UQ26 1411 aa13.38□□□□□ -0.27
PXN-209ENST00000540221 RPGRIP1LQ68CZ1 1315 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms