RNA–Protein interactions for RNA: ENST00000540221.1

PXN-209, Transcript of paxillin, humanhuman

TSL 4

Gene PXN, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PXN-209ENST00000540221 NISCHQ9Y2I1 1504 aa21.87■■□□□ 1.09
PXN-209ENST00000540221 CCDC180Q9P1Z9 1646 aa19.42■□□□□ 0.7
PXN-209ENST00000540221 ABCC9O60706 1549 aa18.93■□□□□ 0.62
PXN-209ENST00000540221 NACADO15069 1562 aa18.3■□□□□ 0.52
PXN-209ENST00000540221 RB1CC1Q8TDY2 1594 aa18.3■□□□□ 0.52
PXN-209ENST00000540221 MYO15BQ96JP2 1530 aa18.26■□□□□ 0.51
PXN-209ENST00000540221 DCAF8L2P0C7V8 631 aa18.25■□□□□ 0.51
PXN-209ENST00000540221 ZCCHC6Q5VYS8 1495 aaKnown RBP18.22■□□□□ 0.51
PXN-209ENST00000540221 DCAF1Q9Y4B6 1507 aa18.16■□□□□ 0.5
PXN-209ENST00000540221 PABPN1Q86U42 306 aaKnown RBP eCLIP17.69■□□□□ 0.42
PXN-209ENST00000540221 UNC13AQ9UPW8 1703 aa17.68■□□□□ 0.42
PXN-209ENST00000540221 SHROOM4Q9ULL8 1493 aa17.65■□□□□ 0.42
PXN-209ENST00000540221 BICRAQ9NZM4 1560 aa17.65■□□□□ 0.42
PXN-209ENST00000540221 SCRIBQ14160 1630 aa17.65■□□□□ 0.42
PXN-209ENST00000540221 DNAJC5BQ9UF47 199 aa17.32■□□□□ 0.36
PXN-209ENST00000540221 EIF4G1Q04637 1599 aaKnown RBP17.23■□□□□ 0.35
PXN-209ENST00000540221 CC2D2AQ9P2K1 1620 aa17.11■□□□□ 0.33
PXN-209ENST00000540221 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
PXN-209ENST00000540221 BAZ1AQ9NRL2 1556 aaPredicted RBP16.98■□□□□ 0.31
PXN-209ENST00000540221 SMARCA4P51532 1647 aa16.92■□□□□ 0.3
PXN-209ENST00000540221 NCAPD3P42695 1498 aa16.9■□□□□ 0.3
PXN-209ENST00000540221 SMARCA2P51531 1590 aa16.89■□□□□ 0.29
PXN-209ENST00000540221 ATAD2BQ9ULI0 1458 aa16.86■□□□□ 0.29
PXN-209ENST00000540221 PEG3Q9GZU2 1588 aa16.81■□□□□ 0.28
PXN-209ENST00000540221 MROH2BQ7Z745 1585 aa16.8■□□□□ 0.28
PXN-209ENST00000540221 HMGXB3Q12766 1538 aa16.8■□□□□ 0.28
PXN-209ENST00000540221 BAZ1BQ9UIG0 1483 aaKnown RBP16.73■□□□□ 0.27
PXN-209ENST00000540221 RSF1Q96T23 1441 aaPredicted RBP16.67■□□□□ 0.26
PXN-209ENST00000540221 WIZO95785 1651 aa16.58■□□□□ 0.24
PXN-209ENST00000540221 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
PXN-209ENST00000540221 LAMC3Q9Y6N6 1575 aa16.42■□□□□ 0.22
PXN-209ENST00000540221 CADPSQ9ULU8 1353 aa16.4■□□□□ 0.22
PXN-209ENST00000540221 ERCC6Q03468 1493 aa16.38■□□□□ 0.21
PXN-209ENST00000540221 PDS5BQ9NTI5 1447 aa16.36■□□□□ 0.21
PXN-209ENST00000540221 NESP48681 1621 aa16.36■□□□□ 0.21
PXN-209ENST00000540221 CFTRP13569 1480 aa16.29■□□□□ 0.2
PXN-209ENST00000540221 CCDC88BA6NC98 1476 aa16.29■□□□□ 0.2
PXN-209ENST00000540221 SUPT5HO00267 1087 aaKnown RBP16.25■□□□□ 0.19
PXN-209ENST00000540221 CUX2O14529 1486 aa16.22■□□□□ 0.19
PXN-209ENST00000540221 FANCD2Q9BXW9 1451 aa16.17■□□□□ 0.18
PXN-209ENST00000540221 CEP164Q9UPV0 1460 aa16.16■□□□□ 0.18
PXN-209ENST00000540221 MRC2Q9UBG0 1479 aa16.13■□□□□ 0.17
PXN-209ENST00000540221 THOC2Q8NI27 1593 aaKnown RBP16.12■□□□□ 0.17
PXN-209ENST00000540221 KIF21AQ7Z4S6 1674 aa16.11■□□□□ 0.17
PXN-209ENST00000540221 WDR62O43379 1518 aa16.06■□□□□ 0.16
PXN-209ENST00000540221 PRDM2Q13029 1718 aa16.05■□□□□ 0.16
PXN-209ENST00000540221 ABCC8Q09428 1581 aa16.01■□□□□ 0.15
PXN-209ENST00000540221 URB2Q14146 1524 aaKnown RBP15.97■□□□□ 0.15
PXN-209ENST00000540221 TOPBP1Q92547 1522 aa15.9■□□□□ 0.14
PXN-209ENST00000540221 DNMBPQ6XZF7 1577 aa15.9■□□□□ 0.14
PXN-209ENST00000540221 IFT140Q96RY7 1462 aa15.85■□□□□ 0.13
PXN-209ENST00000540221 POLA1P09884 1462 aaPredicted RBP15.78■□□□□ 0.12
PXN-209ENST00000540221 CUX1P39880 1505 aa15.76■□□□□ 0.11
PXN-209ENST00000540221 SOGA1O94964 1423 aa15.76■□□□□ 0.11
PXN-209ENST00000540221 WRNQ14191 1432 aaPredicted RBP eCLIP15.74■□□□□ 0.11
PXN-209ENST00000540221 FGD5Q6ZNL6 1462 aa15.73■□□□□ 0.11
PXN-209ENST00000540221 TARBP1Q13395 1621 aaKnown RBP15.69■□□□□ 0.1
PXN-209ENST00000540221 ZNF608Q9ULD9 1512 aaPredicted RBP15.68■□□□□ 0.1
PXN-209ENST00000540221 WDR97A6NE52 1622 aa15.68■□□□□ 0.1
PXN-209ENST00000540221 DNAJC5Q9H3Z4 198 aa15.68■□□□□ 0.1
PXN-209ENST00000540221 TOP2BQ02880 1626 aa15.67■□□□□ 0.1
PXN-209ENST00000540221 RAD54L2Q9Y4B4 1467 aa15.66■□□□□ 0.1
PXN-209ENST00000540221 BIVM-ERCC5R4GMW8 1640 aa15.64■□□□□ 0.09
PXN-209ENST00000540221 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
PXN-209ENST00000540221 EIF4G3O43432 1585 aaKnown RBP15.62■□□□□ 0.09
PXN-209ENST00000540221 AQRO60306 1485 aaKnown RBP eCLIP15.62■□□□□ 0.09
PXN-209ENST00000540221 TDRD9Q8NDG6 1382 aaKnown RBP15.62■□□□□ 0.09
PXN-209ENST00000540221 SYNJ1O43426 1573 aa15.61■□□□□ 0.09
PXN-209ENST00000540221 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
PXN-209ENST00000540221 GRIN2BQ13224 1484 aa15.57■□□□□ 0.08
PXN-209ENST00000540221 GAPVD1Q14C86 1478 aa15.55■□□□□ 0.08
PXN-209ENST00000540221 MAGI1Q96QZ7 1491 aaPredicted RBP15.53■□□□□ 0.08
PXN-209ENST00000540221 ABCA5Q8WWZ7 1642 aa15.5■□□□□ 0.07
PXN-209ENST00000540221 SNAPC4Q5SXM2 1469 aa15.48■□□□□ 0.07
PXN-209ENST00000540221 FBLN2P98095 1184 aa15.47■□□□□ 0.07
PXN-209ENST00000540221 CHMP7Q8WUX9 453 aaPredicted RBP15.47■□□□□ 0.07
PXN-209ENST00000540221 SYNJ2O15056 1496 aa15.46■□□□□ 0.06
PXN-209ENST00000540221 ERICH3Q5RHP9 1530 aa15.45■□□□□ 0.06
PXN-209ENST00000540221 KIF27Q86VH2 1401 aa15.44■□□□□ 0.06
PXN-209ENST00000540221 TRIM41Q8WV44 630 aa15.42■□□□□ 0.06
PXN-209ENST00000540221 PBRM1Q86U86 1689 aa15.41■□□□□ 0.06
PXN-209ENST00000540221 FHAD1B1AJZ9 1412 aa15.41■□□□□ 0.06
PXN-209ENST00000540221 CHD1O14646 1710 aa15.36■□□□□ 0.05
PXN-209ENST00000540221 ADAMTS12P58397 1594 aa15.35■□□□□ 0.05
PXN-209ENST00000540221 IGF1RP08069 1367 aa15.35■□□□□ 0.05
PXN-209ENST00000540221 GRIN2AQ12879 1464 aa15.34■□□□□ 0.05
PXN-209ENST00000540221 CUL7Q14999 1698 aa15.28■□□□□ 0.04
PXN-209ENST00000540221 CLASP1Q7Z460 1538 aa15.28■□□□□ 0.04
PXN-209ENST00000540221 NUP160Q12769 1436 aa15.28■□□□□ 0.04
PXN-209ENST00000540221 CARMIL1Q5VZK9 1371 aa15.26■□□□□ 0.03
PXN-209ENST00000540221 ARHGEF11O15085 1522 aa15.24■□□□□ 0.03
PXN-209ENST00000540221 EEA1Q15075 1411 aa15.22■□□□□ 0.03
PXN-209ENST00000540221 CEP170Q5SW79 1584 aa15.2■□□□□ 0.02
PXN-209ENST00000540221 CHIC1Q5VXU3 224 aa15.2■□□□□ 0.02
PXN-209ENST00000540221 RIMBP3CA6NJZ7 1639 aa15.19■□□□□ 0.02
PXN-209ENST00000540221 RIMBP3BA6NNM3 1639 aa15.19■□□□□ 0.02
PXN-209ENST00000540221 RIMBP3Q9UFD9 1639 aa15.19■□□□□ 0.02
PXN-209ENST00000540221 RAPGEF2Q9Y4G8 1499 aa15.18■□□□□ 0.02
PXN-209ENST00000540221 RUSC2Q8N2Y8 1516 aa15.17■□□□□ 0.02
PXN-209ENST00000540221 KIAA0586Q9BVV6 1533 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms