RNA–Protein interactions for RNA: ENST00000540139.5

CYB561A3-214, Transcript of cytochrome b561 family member A3, humanhuman

TSL 3

Gene CYB561A3, Length 1,202 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYB561A3-214ENST00000540139 KIF15Q9NS87 1388 aa17.82■□□□□ 0.44
CYB561A3-214ENST00000540139 RRP7BPQ9NSQ0 103 aa17.81■□□□□ 0.44
CYB561A3-214ENST00000540139 AGLP35573 1532 aa17.81■□□□□ 0.44
CYB561A3-214ENST00000540139 DUOX2Q9NRD8 1548 aa17.8■□□□□ 0.44
CYB561A3-214ENST00000540139 ABCA6Q8N139 1617 aa17.8■□□□□ 0.44
CYB561A3-214ENST00000540139 ADGBQ8N7X0 1667 aa17.79■□□□□ 0.44
CYB561A3-214ENST00000540139 ERBINQ96RT1 1412 aa17.78■□□□□ 0.44
CYB561A3-214ENST00000540139 ACIN1Q9UKV3 1341 aaKnown RBP17.77■□□□□ 0.44
CYB561A3-214ENST00000540139 HFM1A2PYH4 1435 aa17.77■□□□□ 0.44
CYB561A3-214ENST00000540139 ANKRD50Q9ULJ7 1429 aa17.76■□□□□ 0.43
CYB561A3-214ENST00000540139 NAIPQ13075 1403 aa17.73■□□□□ 0.43
CYB561A3-214ENST00000540139 HRCP23327 699 aa17.73■□□□□ 0.43
CYB561A3-214ENST00000540139 ARID4BQ4LE39 1312 aaPredicted RBP17.72■□□□□ 0.43
CYB561A3-214ENST00000540139 KIF3BO15066 747 aa17.72■□□□□ 0.43
CYB561A3-214ENST00000540139 BCORL1Q5H9F3 1711 aa17.71■□□□□ 0.43
CYB561A3-214ENST00000540139 EIF2AK4Q9P2K8 1649 aaKnown RBP17.7■□□□□ 0.42
CYB561A3-214ENST00000540139 SETD5Q9C0A6 1442 aa17.68■□□□□ 0.42
CYB561A3-214ENST00000540139 FAM135AQ9P2D6 1515 aa17.67■□□□□ 0.42
CYB561A3-214ENST00000540139 GGT6Q6P531 493 aa17.65■□□□□ 0.42
CYB561A3-214ENST00000540139 RNF17Q9BXT8 1623 aaKnown RBP17.64■□□□□ 0.41
CYB561A3-214ENST00000540139 GCC2Q8IWJ2 1684 aa17.64■□□□□ 0.41
CYB561A3-214ENST00000540139 SIGLEC1Q9BZZ2 1709 aa17.64■□□□□ 0.41
CYB561A3-214ENST00000540139 KANK1Q14678 1352 aa17.63■□□□□ 0.41
CYB561A3-214ENST00000540139 CNTLNQ9NXG0 1405 aa17.63■□□□□ 0.41
CYB561A3-214ENST00000540139 ATXN8OSP0DMR3 200 aa17.62■□□□□ 0.41
CYB561A3-214ENST00000540139 KDM5DQ9BY66 1539 aa17.62■□□□□ 0.41
CYB561A3-214ENST00000540139 MLECQ14165 292 aa17.61■□□□□ 0.41
CYB561A3-214ENST00000540139 ESF1Q9H501 851 aaKnown RBP17.61■□□□□ 0.41
CYB561A3-214ENST00000540139 DEPDC5O75140 1603 aa17.61■□□□□ 0.41
CYB561A3-214ENST00000540139 WASHC2CQ9Y4E1 1318 aa17.6■□□□□ 0.41
CYB561A3-214ENST00000540139 PRDM15P57071 1507 aaPredicted RBP17.6■□□□□ 0.41
CYB561A3-214ENST00000540139 ADAMTSL3P82987 1691 aa17.59■□□□□ 0.41
CYB561A3-214ENST00000540139 RAB3GAP2Q9H2M9 1393 aa17.59■□□□□ 0.41
CYB561A3-214ENST00000540139 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
CYB561A3-214ENST00000540139 VWDEQ8N2E2 1590 aa17.58■□□□□ 0.41
CYB561A3-214ENST00000540139 NUP155O75694 1391 aa17.58■□□□□ 0.4
CYB561A3-214ENST00000540139 MROH1Q8NDA8 1641 aa17.58■□□□□ 0.4
CYB561A3-214ENST00000540139 UNC13BO14795 1591 aa17.57■□□□□ 0.4
CYB561A3-214ENST00000540139 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.57■□□□□ 0.4
CYB561A3-214ENST00000540139 LMTK2Q8IWU2 1503 aa17.57■□□□□ 0.4
CYB561A3-214ENST00000540139 KDM4FA0A1W2PPD8 638 aa17.56■□□□□ 0.4
CYB561A3-214ENST00000540139 PCGF6Q9BYE7 350 aa17.55■□□□□ 0.4
CYB561A3-214ENST00000540139 ARHGAP31Q2M1Z3 1444 aa17.54■□□□□ 0.4
CYB561A3-214ENST00000540139 ZMYM3Q14202 1370 aa17.53■□□□□ 0.4
CYB561A3-214ENST00000540139 ABCC3O15438 1527 aa17.53■□□□□ 0.4
CYB561A3-214ENST00000540139 TRIM52Q96A61 297 aa17.53■□□□□ 0.4
CYB561A3-214ENST00000540139 ZC3H13Q5T200 1668 aaKnown RBP17.52■□□□□ 0.4
CYB561A3-214ENST00000540139 IQGAP3Q86VI3 1631 aa17.5■□□□□ 0.39
CYB561A3-214ENST00000540139 MROH2AA6NES4 1674 aa17.49■□□□□ 0.39
CYB561A3-214ENST00000540139 MADDQ8WXG6 1647 aa17.49■□□□□ 0.39
CYB561A3-214ENST00000540139 RPRD2Q5VT52 1461 aaKnown RBP17.49■□□□□ 0.39
CYB561A3-214ENST00000540139 FER1L4A9Z1Z3 1794 aa17.48■□□□□ 0.39
CYB561A3-214ENST00000540139 MPHOSPH9Q99550 1183 aa17.48■□□□□ 0.39
CYB561A3-214ENST00000540139 PZPP20742 1482 aa17.47■□□□□ 0.39
CYB561A3-214ENST00000540139 PTPRMP28827 1452 aa17.47■□□□□ 0.39
CYB561A3-214ENST00000540139 NPATQ14207 1427 aa17.47■□□□□ 0.39
CYB561A3-214ENST00000540139 TET3O43151 1660 aa17.45■□□□□ 0.38
CYB561A3-214ENST00000540139 SETD1BQ9UPS6 1966 aaKnown RBP17.45■□□□□ 0.38
CYB561A3-214ENST00000540139 EFCAB6Q5THR3 1501 aa17.45■□□□□ 0.38
CYB561A3-214ENST00000540139 CLTCQ00610 1675 aaKnown RBP17.45■□□□□ 0.38
CYB561A3-214ENST00000540139 SLC4A2P04920 1241 aa17.44■□□□□ 0.38
CYB561A3-214ENST00000540139 MAPK8IP2Q13387 824 aaPredicted RBP17.43■□□□□ 0.38
CYB561A3-214ENST00000540139 PKD2Q13563 968 aa17.43■□□□□ 0.38
CYB561A3-214ENST00000540139 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
CYB561A3-214ENST00000540139 CEP152O94986 1710 aa17.42■□□□□ 0.38
CYB561A3-214ENST00000540139 CAMSAP1Q5T5Y3 1602 aa17.42■□□□□ 0.38
CYB561A3-214ENST00000540139 NOS1P29475 1434 aa17.41■□□□□ 0.38
CYB561A3-214ENST00000540139 CEBPAP49715 358 aaPredicted RBP17.41■□□□□ 0.38
CYB561A3-214ENST00000540139 PTPRTO14522 1441 aa17.4■□□□□ 0.38
CYB561A3-214ENST00000540139 FBXO31Q5XUX0 539 aaPredicted RBP17.4■□□□□ 0.38
CYB561A3-214ENST00000540139 C3P01024 1663 aa17.39■□□□□ 0.37
CYB561A3-214ENST00000540139 SLC52A1Q9NWF4 448 aa17.39■□□□□ 0.37
CYB561A3-214ENST00000540139 ERVK-7P63135 1459 aa17.38■□□□□ 0.37
CYB561A3-214ENST00000540139 SPATA31D1Q6ZQQ2 1576 aa17.38■□□□□ 0.37
CYB561A3-214ENST00000540139 PLCB2Q00722 1185 aa17.38■□□□□ 0.37
CYB561A3-214ENST00000540139 TNRQ92752 1358 aa17.37■□□□□ 0.37
CYB561A3-214ENST00000540139 E9PCH4 1651 aa17.36■□□□□ 0.37
CYB561A3-214ENST00000540139 MYCNP04198 464 aaPredicted RBP17.35■□□□□ 0.37
CYB561A3-214ENST00000540139 PLA2R1Q13018 1463 aa17.33■□□□□ 0.37
CYB561A3-214ENST00000540139 NLRP1Q9C000 1473 aa17.33■□□□□ 0.37
CYB561A3-214ENST00000540139 DHX57Q6P158 1386 aaKnown RBP17.33■□□□□ 0.36
CYB561A3-214ENST00000540139 ANKRD30BQ9BXX2 1392 aa17.33■□□□□ 0.36
CYB561A3-214ENST00000540139 PREX1Q8TCU6 1659 aa17.32■□□□□ 0.36
CYB561A3-214ENST00000540139 IDI1Q13907 227 aa17.31■□□□□ 0.36
CYB561A3-214ENST00000540139 CFAP65Q6ZU64 1925 aaKnown RBP17.31■□□□□ 0.36
CYB561A3-214ENST00000540139 TRPM2O94759 1503 aa17.3■□□□□ 0.36
CYB561A3-214ENST00000540139 CLSPNQ9HAW4 1339 aa17.29■□□□□ 0.36
CYB561A3-214ENST00000540139 UHRF1BP1Q6BDS2 1440 aa17.29■□□□□ 0.36
CYB561A3-214ENST00000540139 SYNMO15061 1565 aa17.28■□□□□ 0.36
CYB561A3-214ENST00000540139 A2ML1A8K2U0 1454 aa17.27■□□□□ 0.36
CYB561A3-214ENST00000540139 SPHKAPQ2M3C7 1700 aa17.27■□□□□ 0.35
CYB561A3-214ENST00000540139 THEMISQ8N1K5 641 aaPredicted RBP17.26■□□□□ 0.35
CYB561A3-214ENST00000540139 CCDC144AA2RUR9 1427 aa17.26■□□□□ 0.35
CYB561A3-214ENST00000540139 PIK3C2BO00750 1634 aa17.25■□□□□ 0.35
CYB561A3-214ENST00000540139 KDM5AP29375 1690 aaKnown RBP17.23■□□□□ 0.35
CYB561A3-214ENST00000540139 STAG3Q9UJ98 1225 aa17.22■□□□□ 0.35
CYB561A3-214ENST00000540139 MYO3AQ8NEV4 1616 aa17.21■□□□□ 0.35
CYB561A3-214ENST00000540139 NEURL4Q96JN8 1562 aa17.21■□□□□ 0.35
CYB561A3-214ENST00000540139 CEP170BQ9Y4F5 1589 aaPredicted RBP17.21■□□□□ 0.35
CYB561A3-214ENST00000540139 BCANQ96GW7 911 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms