RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 ATP10AO60312 1499 aa17.09■□□□□ 0.33
VTN-202ENST00000539746 KIDINS220Q9ULH0 1771 aa17.08■□□□□ 0.33
VTN-202ENST00000539746 BCORL1Q5H9F3 1711 aa17.07■□□□□ 0.32
VTN-202ENST00000539746 KIF3BO15066 747 aa17.05■□□□□ 0.32
VTN-202ENST00000539746 IQGAP3Q86VI3 1631 aa17.04■□□□□ 0.32
VTN-202ENST00000539746 AGLP35573 1532 aa17.04■□□□□ 0.32
VTN-202ENST00000539746 DEPDC5O75140 1603 aa17.03■□□□□ 0.32
VTN-202ENST00000539746 DIP2CQ9Y2E4 1556 aa17.03■□□□□ 0.32
VTN-202ENST00000539746 PRDM15P57071 1507 aaPredicted RBP17.03■□□□□ 0.32
VTN-202ENST00000539746 ARHGEF40Q8TER5 1519 aa17.03■□□□□ 0.32
VTN-202ENST00000539746 KDM6BO15054 1643 aa17.03■□□□□ 0.32
VTN-202ENST00000539746 ESF1Q9H501 851 aaKnown RBP17.02■□□□□ 0.32
VTN-202ENST00000539746 RNF17Q9BXT8 1623 aaKnown RBP17.02■□□□□ 0.31
VTN-202ENST00000539746 FRMPD1Q5SYB0 1578 aa17.02■□□□□ 0.31
VTN-202ENST00000539746 RPRD2Q5VT52 1461 aaKnown RBP17.01■□□□□ 0.31
VTN-202ENST00000539746 TONSLQ96HA7 1378 aa17.01■□□□□ 0.31
VTN-202ENST00000539746 ABCA6Q8N139 1617 aa17■□□□□ 0.31
VTN-202ENST00000539746 PKD2Q13563 968 aa17■□□□□ 0.31
VTN-202ENST00000539746 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17■□□□□ 0.31
VTN-202ENST00000539746 LMTK2Q8IWU2 1503 aa17■□□□□ 0.31
VTN-202ENST00000539746 ZC3H13Q5T200 1668 aaKnown RBP16.99■□□□□ 0.31
VTN-202ENST00000539746 PZPP20742 1482 aa16.99■□□□□ 0.31
VTN-202ENST00000539746 STAC3Q96MF2 364 aa16.98■□□□□ 0.31
VTN-202ENST00000539746 WASHC2CQ9Y4E1 1318 aa16.97■□□□□ 0.31
VTN-202ENST00000539746 TET3O43151 1660 aa16.96■□□□□ 0.31
VTN-202ENST00000539746 CCDC144AA2RUR9 1427 aa16.95■□□□□ 0.3
VTN-202ENST00000539746 CNTLNQ9NXG0 1405 aa16.95■□□□□ 0.3
VTN-202ENST00000539746 VWDEQ8N2E2 1590 aa16.94■□□□□ 0.3
VTN-202ENST00000539746 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
VTN-202ENST00000539746 GGT6Q6P531 493 aa16.93■□□□□ 0.3
VTN-202ENST00000539746 YEATS2Q9ULM3 1422 aa16.93■□□□□ 0.3
VTN-202ENST00000539746 ARHGAP31Q2M1Z3 1444 aa16.92■□□□□ 0.3
VTN-202ENST00000539746 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
VTN-202ENST00000539746 EFCAB6Q5THR3 1501 aa16.9■□□□□ 0.3
VTN-202ENST00000539746 NEUROD1Q13562 356 aa16.88■□□□□ 0.29
VTN-202ENST00000539746 COL17A1Q9UMD9 1497 aaPredicted RBP16.87■□□□□ 0.29
VTN-202ENST00000539746 ABCC3O15438 1527 aa16.86■□□□□ 0.29
VTN-202ENST00000539746 TRPM2O94759 1503 aa16.86■□□□□ 0.29
VTN-202ENST00000539746 PTPRTO14522 1441 aa16.85■□□□□ 0.29
VTN-202ENST00000539746 NEURL4Q96JN8 1562 aa16.85■□□□□ 0.29
VTN-202ENST00000539746 MROH1Q8NDA8 1641 aa16.85■□□□□ 0.29
VTN-202ENST00000539746 SLC52A1Q9NWF4 448 aa16.84■□□□□ 0.29
VTN-202ENST00000539746 CAMSAP1Q5T5Y3 1602 aa16.8■□□□□ 0.28
VTN-202ENST00000539746 SPHKAPQ2M3C7 1700 aa16.79■□□□□ 0.28
VTN-202ENST00000539746 SIN3AQ96ST3 1273 aa16.78■□□□□ 0.28
VTN-202ENST00000539746 E9PCH4 1651 aa16.78■□□□□ 0.28
VTN-202ENST00000539746 RPGRIP1LQ68CZ1 1315 aa16.77■□□□□ 0.28
VTN-202ENST00000539746 NPATQ14207 1427 aa16.77■□□□□ 0.27
VTN-202ENST00000539746 MROH2AA6NES4 1674 aa16.76■□□□□ 0.27
VTN-202ENST00000539746 PPP1R15AO75807 674 aaPredicted RBP16.76■□□□□ 0.27
VTN-202ENST00000539746 HDGFP51858 240 aaKnown RBP16.76■□□□□ 0.27
VTN-202ENST00000539746 FOXD1Q16676 465 aa16.76■□□□□ 0.27
VTN-202ENST00000539746 CEP152O94986 1710 aa16.75■□□□□ 0.27
VTN-202ENST00000539746 NOS1P29475 1434 aa16.74■□□□□ 0.27
VTN-202ENST00000539746 SLC24A1O60721 1099 aa16.71■□□□□ 0.27
VTN-202ENST00000539746 L3MBTL2Q969R5 705 aa16.71■□□□□ 0.27
VTN-202ENST00000539746 PLA2R1Q13018 1463 aa16.7■□□□□ 0.26
VTN-202ENST00000539746 ZMYM3Q14202 1370 aa16.7■□□□□ 0.26
VTN-202ENST00000539746 MLECQ14165 292 aa16.7■□□□□ 0.26
VTN-202ENST00000539746 ERVK-7P63135 1459 aa16.69■□□□□ 0.26
VTN-202ENST00000539746 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
VTN-202ENST00000539746 UHRF1BP1Q6BDS2 1440 aa16.69■□□□□ 0.26
VTN-202ENST00000539746 CLTCQ00610 1675 aaKnown RBP16.68■□□□□ 0.26
VTN-202ENST00000539746 KIF1BO60333 1816 aa16.68■□□□□ 0.26
VTN-202ENST00000539746 SPATA31D1Q6ZQQ2 1576 aa16.68■□□□□ 0.26
VTN-202ENST00000539746 VGFO15240 615 aaPredicted RBP16.67■□□□□ 0.26
VTN-202ENST00000539746 NLRP1Q9C000 1473 aa16.67■□□□□ 0.26
VTN-202ENST00000539746 SPATA31E1Q6ZUB1 1445 aa16.66■□□□□ 0.26
VTN-202ENST00000539746 DCAF11Q8TEB1 546 aa16.66■□□□□ 0.26
VTN-202ENST00000539746 PREX1Q8TCU6 1659 aa16.65■□□□□ 0.26
VTN-202ENST00000539746 ZNF326Q5BKZ1 582 aaKnown RBP16.65■□□□□ 0.26
VTN-202ENST00000539746 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.65■□□□□ 0.26
VTN-202ENST00000539746 TNRQ92752 1358 aa16.64■□□□□ 0.26
VTN-202ENST00000539746 MYOM2P54296 1465 aa16.64■□□□□ 0.25
VTN-202ENST00000539746 CLTCL1P53675 1640 aa16.63■□□□□ 0.25
VTN-202ENST00000539746 ADGRB3O60242 1522 aa16.63■□□□□ 0.25
VTN-202ENST00000539746 PIK3C2BO00750 1634 aa16.63■□□□□ 0.25
VTN-202ENST00000539746 KDM5AP29375 1690 aaKnown RBP16.62■□□□□ 0.25
VTN-202ENST00000539746 FER1L4A9Z1Z3 1794 aa16.62■□□□□ 0.25
VTN-202ENST00000539746 CHGAP10645 457 aaKnown RBP16.62■□□□□ 0.25
VTN-202ENST00000539746 RGL3Q3MIN7 710 aa16.62■□□□□ 0.25
VTN-202ENST00000539746 ZNF316A6NFI3 1004 aaPredicted RBP16.61■□□□□ 0.25
VTN-202ENST00000539746 EIF4G2P78344 907 aaKnown RBP eCLIP16.61■□□□□ 0.25
VTN-202ENST00000539746 EIF3AQ14152 1382 aaKnown RBP16.6■□□□□ 0.25
VTN-202ENST00000539746 ZFYVE9O95405 1425 aa16.6■□□□□ 0.25
VTN-202ENST00000539746 RALGAPBQ86X10 1494 aa16.6■□□□□ 0.25
VTN-202ENST00000539746 PRAG1Q86YV5 1406 aa16.58■□□□□ 0.24
VTN-202ENST00000539746 SYNMO15061 1565 aa16.58■□□□□ 0.24
VTN-202ENST00000539746 ROCK2O75116 1388 aaKnown RBP16.57■□□□□ 0.24
VTN-202ENST00000539746 IDI1Q13907 227 aa16.57■□□□□ 0.24
VTN-202ENST00000539746 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
VTN-202ENST00000539746 THEMISQ8N1K5 641 aaPredicted RBP16.55■□□□□ 0.24
VTN-202ENST00000539746 EID1Q9Y6B2 187 aa16.55■□□□□ 0.24
VTN-202ENST00000539746 SIGLEC1Q9BZZ2 1709 aa16.54■□□□□ 0.24
VTN-202ENST00000539746 CARD11Q9BXL7 1154 aa16.54■□□□□ 0.24
VTN-202ENST00000539746 KIAA1210Q9ULL0 1709 aa16.53■□□□□ 0.24
VTN-202ENST00000539746 ADAMTSL3P82987 1691 aa16.53■□□□□ 0.24
VTN-202ENST00000539746 LAMC1P11047 1609 aa16.53■□□□□ 0.24
VTN-202ENST00000539746 GPRASP1Q5JY77 1395 aa16.52■□□□□ 0.24
VTN-202ENST00000539746 FBXO31Q5XUX0 539 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms