RNA–Protein interactions for RNA: ENST00000538367.5

TRA2A-211, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-211ENST00000538367 RRP7BPQ9NSQ0 103 aa23.48■■□□□ 1.35
TRA2A-211ENST00000538367 TMC1Q8TDI8 760 aa23.48■■□□□ 1.35
TRA2A-211ENST00000538367 FRAT1Q92837 279 aaPredicted RBP23.48■■□□□ 1.35
TRA2A-211ENST00000538367 E9PCH4 1651 aa23.47■■□□□ 1.35
TRA2A-211ENST00000538367 USP47Q96K76 1375 aa23.46■■□□□ 1.35
TRA2A-211ENST00000538367 RALBP1Q15311 655 aa23.44■■□□□ 1.34
TRA2A-211ENST00000538367 MYBBP1AQ9BQG0 1328 aaKnown RBP23.44■■□□□ 1.34
TRA2A-211ENST00000538367 EIF5BO60841 1220 aaKnown RBP23.44■■□□□ 1.34
TRA2A-211ENST00000538367 DAXXQ9UER7 740 aaPredicted RBP23.42■■□□□ 1.34
TRA2A-211ENST00000538367 PLEKHH2Q8IVE3 1493 aa23.41■■□□□ 1.34
TRA2A-211ENST00000538367 ABCC2Q92887 1545 aa23.41■■□□□ 1.34
TRA2A-211ENST00000538367 DNMT1P26358 1616 aaKnown RBP23.41■■□□□ 1.34
TRA2A-211ENST00000538367 ATP10BO94823 1461 aa23.4■■□□□ 1.34
TRA2A-211ENST00000538367 RALGAPBQ86X10 1494 aa23.39■■□□□ 1.34
TRA2A-211ENST00000538367 UHRF1BP1Q6BDS2 1440 aa23.39■■□□□ 1.33
TRA2A-211ENST00000538367 GLIPR1L2Q4G1C9 344 aa23.38■■□□□ 1.33
TRA2A-211ENST00000538367 UHRF1BP1LA0JNW5 1464 aa23.35■■□□□ 1.33
TRA2A-211ENST00000538367 DAPK1P53355 1430 aa23.35■■□□□ 1.33
TRA2A-211ENST00000538367 TROQ12816 1431 aaPredicted RBP23.35■■□□□ 1.33
TRA2A-211ENST00000538367 ARHGEF12Q9NZN5 1544 aa23.33■■□□□ 1.33
TRA2A-211ENST00000538367 CHIC2Q9UKJ5 165 aa23.33■■□□□ 1.32
TRA2A-211ENST00000538367 ADCY10Q96PN6 1610 aa23.33■■□□□ 1.32
TRA2A-211ENST00000538367 KDM2BQ8NHM5 1336 aa23.31■■□□□ 1.32
TRA2A-211ENST00000538367 PZPP20742 1482 aa23.3■■□□□ 1.32
TRA2A-211ENST00000538367 VIRMAQ69YN4 1812 aaKnown RBP23.3■■□□□ 1.32
TRA2A-211ENST00000538367 FAM161AQ3B820 660 aa23.3■■□□□ 1.32
TRA2A-211ENST00000538367 PLEKHD1A6NEE1 506 aa23.29■■□□□ 1.32
TRA2A-211ENST00000538367 CENPQQ7L2Z9 268 aaPredicted RBP23.29■■□□□ 1.32
TRA2A-211ENST00000538367 PKNOX2Q96KN3 472 aa23.29■■□□□ 1.32
TRA2A-211ENST00000538367 BLMP54132 1417 aaPredicted RBP23.29■■□□□ 1.32
TRA2A-211ENST00000538367 ZCCHC11Q5TAX3 1644 aaKnown RBP23.28■■□□□ 1.32
TRA2A-211ENST00000538367 NLRP13Q86W25 1043 aa23.27■■□□□ 1.32
TRA2A-211ENST00000538367 FOXD1Q16676 465 aa23.27■■□□□ 1.32
TRA2A-211ENST00000538367 PARD3Q8TEW0 1356 aa23.27■■□□□ 1.32
TRA2A-211ENST00000538367 KIAA1107Q9UPP5 1409 aa23.27■■□□□ 1.32
TRA2A-211ENST00000538367 ADGBQ8N7X0 1667 aa23.26■■□□□ 1.31
TRA2A-211ENST00000538367 L1TD1Q5T7N2 865 aaKnown RBP23.25■■□□□ 1.31
TRA2A-211ENST00000538367 SLC4A1APQ9BWU0 796 aaKnown RBP23.24■■□□□ 1.31
TRA2A-211ENST00000538367 ABCC5O15440 1437 aa23.24■■□□□ 1.31
TRA2A-211ENST00000538367 ITSN2Q9NZM3 1697 aa23.21■■□□□ 1.31
TRA2A-211ENST00000538367 CRBNQ96SW2 442 aa23.21■■□□□ 1.31
TRA2A-211ENST00000538367 FRAT2O75474 233 aaPredicted RBP23.2■■□□□ 1.3
TRA2A-211ENST00000538367 C8orf34Q49A92 452 aa23.2■■□□□ 1.3
TRA2A-211ENST00000538367 DCAF11Q8TEB1 546 aa23.2■■□□□ 1.3
TRA2A-211ENST00000538367 RIMBP3CA6NJZ7 1639 aa23.16■■□□□ 1.3
TRA2A-211ENST00000538367 RIMBP3BA6NNM3 1639 aa23.16■■□□□ 1.3
TRA2A-211ENST00000538367 RIMBP3Q9UFD9 1639 aa23.16■■□□□ 1.3
TRA2A-211ENST00000538367 ADGRL2O95490 1459 aa23.15■■□□□ 1.3
TRA2A-211ENST00000538367 ABCC10Q5T3U5 1492 aa23.15■■□□□ 1.3
TRA2A-211ENST00000538367 CDC42BPAQ5VT25 1732 aa23.15■■□□□ 1.3
TRA2A-211ENST00000538367 POLR3GLQ9BT43 218 aa23.13■■□□□ 1.29
TRA2A-211ENST00000538367 GPATCH8Q9UKJ3 1502 aaKnown RBP23.13■■□□□ 1.29
TRA2A-211ENST00000538367 SLC4A3P48751 1232 aa23.12■■□□□ 1.29
TRA2A-211ENST00000538367 CROCC2H7BZ55 1655 aa23.11■■□□□ 1.29
TRA2A-211ENST00000538367 RRP9O43818 475 aaKnown RBP23.11■■□□□ 1.29
TRA2A-211ENST00000538367 EIF3AQ14152 1382 aaKnown RBP23.1■■□□□ 1.29
TRA2A-211ENST00000538367 RRAGDQ9NQL2 400 aaPredicted RBP23.08■■□□□ 1.28
TRA2A-211ENST00000538367 CARD11Q9BXL7 1154 aa23.07■■□□□ 1.28
TRA2A-211ENST00000538367 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.07■■□□□ 1.289e-16■■■■□ 20.9
TRA2A-211ENST00000538367 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.06■■□□□ 1.28
TRA2A-211ENST00000538367 LAMC1P11047 1609 aa23.06■■□□□ 1.28
TRA2A-211ENST00000538367 TTC37Q6PGP7 1564 aa23.06■■□□□ 1.28
TRA2A-211ENST00000538367 KDM5DQ9BY66 1539 aa23.06■■□□□ 1.28
TRA2A-211ENST00000538367 BECN1Q14457 450 aa23.06■■□□□ 1.28
TRA2A-211ENST00000538367 CDCA7LQ96GN5 454 aa23.06■■□□□ 1.28
TRA2A-211ENST00000538367 CFDP1Q9UEE9 299 aaPredicted RBP23.06■■□□□ 1.28
TRA2A-211ENST00000538367 PREX2Q70Z35 1606 aa23.05■■□□□ 1.28
TRA2A-211ENST00000538367 WDR7Q9Y4E6 1490 aa23.05■■□□□ 1.28
TRA2A-211ENST00000538367 PLIN1O60240 522 aa23.05■■□□□ 1.28
TRA2A-211ENST00000538367 NPM1P06748 294 aaKnown RBP eCLIP23.05■■□□□ 1.28
TRA2A-211ENST00000538367 CLCN1P35523 988 aa23.05■■□□□ 1.28
TRA2A-211ENST00000538367 CNGB1Q14028 1251 aaPredicted RBP23.05■■□□□ 1.28
TRA2A-211ENST00000538367 MYO5CQ9NQX4 1742 aa23.04■■□□□ 1.28
TRA2A-211ENST00000538367 CDC42BPBQ9Y5S2 1711 aa23.03■■□□□ 1.28
TRA2A-211ENST00000538367 CAMSAP2Q08AD1 1489 aa23.02■■□□□ 1.28
TRA2A-211ENST00000538367 CCDC144AA2RUR9 1427 aa23.02■■□□□ 1.28
TRA2A-211ENST00000538367 ZMYM3Q14202 1370 aa23.01■■□□□ 1.27
TRA2A-211ENST00000538367 SENP3-EIF4A1A0A087X0R7 540 aa23■■□□□ 1.27
TRA2A-211ENST00000538367 ASXL2Q76L83 1435 aa23■■□□□ 1.27
TRA2A-211ENST00000538367 POGKQ9P215 609 aa22.99■■□□□ 1.27
TRA2A-211ENST00000538367 CYB5RLQ6IPT4 315 aa22.99■■□□□ 1.27
TRA2A-211ENST00000538367 SKAP1Q86WV1 359 aa22.99■■□□□ 1.27
TRA2A-211ENST00000538367 PNNQ9H307 717 aaKnown RBP22.99■■□□□ 1.27
TRA2A-211ENST00000538367 ZNF644Q9H582 1327 aaPredicted RBP22.98■■□□□ 1.27
TRA2A-211ENST00000538367 TRPM1Q7Z4N2 1603 aa22.98■■□□□ 1.27
TRA2A-211ENST00000538367 ST20-MTHFSA0A0A6YYL1 179 aa22.98■■□□□ 1.27
TRA2A-211ENST00000538367 COL17A1Q9UMD9 1497 aaPredicted RBP22.98■■□□□ 1.27
TRA2A-211ENST00000538367 PER1O15534 1290 aaPredicted RBP22.97■■□□□ 1.27
TRA2A-211ENST00000538367 HSP90AA1P07900 732 aaKnown RBP22.97■■□□□ 1.27
TRA2A-211ENST00000538367 FSD2A1L4K1 749 aa22.96■■□□□ 1.27
TRA2A-211ENST00000538367 HSP90AA2PQ14568 343 aaPredicted RBP22.96■■□□□ 1.27
TRA2A-211ENST00000538367 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
TRA2A-211ENST00000538367 ZNF777Q9ULD5 760 aaPredicted RBP22.96■■□□□ 1.27
TRA2A-211ENST00000538367 USP19O94966 1318 aa22.94■■□□□ 1.26
TRA2A-211ENST00000538367 MAPK8IP3Q9UPT6 1336 aa22.94■■□□□ 1.26
TRA2A-211ENST00000538367 C20orf194Q5TEA3 1177 aa22.94■■□□□ 1.26
TRA2A-211ENST00000538367 ARHGAP5Q13017 1502 aa22.94■■□□□ 1.26
TRA2A-211ENST00000538367 PKD2Q13563 968 aa22.94■■□□□ 1.26
TRA2A-211ENST00000538367 ZMYND15Q9H091 742 aa22.94■■□□□ 1.26
TRA2A-211ENST00000538367 ABCA9Q8IUA7 1624 aa22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms