RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 RNF17Q9BXT8 1623 aaKnown RBP13.03□□□□□ -0.32
SPARC-208ENST00000538026 FAM50AQ14320 339 aaKnown RBP13.03□□□□□ -0.32
SPARC-208ENST00000538026 KIF15Q9NS87 1388 aa13.03□□□□□ -0.32
SPARC-208ENST00000538026 PREX1Q8TCU6 1659 aa13.02□□□□□ -0.32
SPARC-208ENST00000538026 DUOX2Q9NRD8 1548 aa13.02□□□□□ -0.33
SPARC-208ENST00000538026 FBXO31Q5XUX0 539 aaPredicted RBP13.01□□□□□ -0.33
SPARC-208ENST00000538026 ESF1Q9H501 851 aaKnown RBP13.01□□□□□ -0.33
SPARC-208ENST00000538026 ADGRL2O95490 1459 aa13.01□□□□□ -0.33
SPARC-208ENST00000538026 EIF2AK4Q9P2K8 1649 aaKnown RBP13□□□□□ -0.33
SPARC-208ENST00000538026 STRCQ7RTU9 1775 aa12.99□□□□□ -0.33
SPARC-208ENST00000538026 NPATQ14207 1427 aa12.99□□□□□ -0.33
SPARC-208ENST00000538026 CFAP65Q6ZU64 1925 aaKnown RBP12.99□□□□□ -0.33
SPARC-208ENST00000538026 ABCC3O15438 1527 aa12.98□□□□□ -0.33
SPARC-208ENST00000538026 WASHC2CQ9Y4E1 1318 aa12.98□□□□□ -0.33
SPARC-208ENST00000538026 KDM5DQ9BY66 1539 aa12.98□□□□□ -0.33
SPARC-208ENST00000538026 ANKRD30AQ9BXX3 1397 aa12.97□□□□□ -0.33
SPARC-208ENST00000538026 DEPDC5O75140 1603 aa12.97□□□□□ -0.33
SPARC-208ENST00000538026 UHRF1BP1Q6BDS2 1440 aa12.96□□□□□ -0.33
SPARC-208ENST00000538026 ERBINQ96RT1 1412 aa12.96□□□□□ -0.33
SPARC-208ENST00000538026 CEP152O94986 1710 aa12.96□□□□□ -0.33
SPARC-208ENST00000538026 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.96□□□□□ -0.33
SPARC-208ENST00000538026 PZPP20742 1482 aa12.96□□□□□ -0.34
SPARC-208ENST00000538026 RRBP1Q9P2E9 1410 aaKnown RBP12.96□□□□□ -0.34
SPARC-208ENST00000538026 FAM135AQ9P2D6 1515 aa12.95□□□□□ -0.34
SPARC-208ENST00000538026 PRDM15P57071 1507 aaPredicted RBP12.94□□□□□ -0.34
SPARC-208ENST00000538026 VWDEQ8N2E2 1590 aa12.94□□□□□ -0.34
SPARC-208ENST00000538026 MYO3AQ8NEV4 1616 aa12.93□□□□□ -0.34
SPARC-208ENST00000538026 ITGAEP38570 1179 aa12.92□□□□□ -0.34
SPARC-208ENST00000538026 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.92□□□□□ -0.34
SPARC-208ENST00000538026 ANKRD50Q9ULJ7 1429 aa12.92□□□□□ -0.34
SPARC-208ENST00000538026 ZC3H13Q5T200 1668 aaKnown RBP12.92□□□□□ -0.34
SPARC-208ENST00000538026 ROCK1Q13464 1354 aa12.92□□□□□ -0.34
SPARC-208ENST00000538026 CAMSAP1Q5T5Y3 1602 aa12.91□□□□□ -0.34
SPARC-208ENST00000538026 ZNF142P52746 1687 aaPredicted RBP12.91□□□□□ -0.34
SPARC-208ENST00000538026 TNRQ92752 1358 aa12.91□□□□□ -0.34
SPARC-208ENST00000538026 CEP170BQ9Y4F5 1589 aaPredicted RBP12.9□□□□□ -0.34
SPARC-208ENST00000538026 ERVK-7P63135 1459 aa12.9□□□□□ -0.34
SPARC-208ENST00000538026 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.35
SPARC-208ENST00000538026 ARHGAP31Q2M1Z3 1444 aa12.89□□□□□ -0.35
SPARC-208ENST00000538026 LMTK2Q8IWU2 1503 aa12.89□□□□□ -0.35
SPARC-208ENST00000538026 A2ML1A8K2U0 1454 aa12.88□□□□□ -0.35
SPARC-208ENST00000538026 NCKAP5LQ9HCH0 1330 aa12.88□□□□□ -0.35
SPARC-208ENST00000538026 UNC13BO14795 1591 aa12.86□□□□□ -0.35
SPARC-208ENST00000538026 NAIPQ13075 1403 aa12.84□□□□□ -0.35
SPARC-208ENST00000538026 PLA2R1Q13018 1463 aa12.84□□□□□ -0.35
SPARC-208ENST00000538026 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
SPARC-208ENST00000538026 EFCAB6Q5THR3 1501 aa12.83□□□□□ -0.35
SPARC-208ENST00000538026 SYNMO15061 1565 aa12.83□□□□□ -0.36
SPARC-208ENST00000538026 PTPRTO14522 1441 aa12.83□□□□□ -0.36
SPARC-208ENST00000538026 NOS1P29475 1434 aa12.83□□□□□ -0.36
SPARC-208ENST00000538026 KANK1Q14678 1352 aa12.82□□□□□ -0.36
SPARC-208ENST00000538026 NEURL4Q96JN8 1562 aa12.81□□□□□ -0.36
SPARC-208ENST00000538026 IDI1Q13907 227 aa12.81□□□□□ -0.36
SPARC-208ENST00000538026 UBR1Q8IWV7 1749 aa12.81□□□□□ -0.36
SPARC-208ENST00000538026 UGGT1Q9NYU2 1555 aa12.81□□□□□ -0.36
SPARC-208ENST00000538026 IQGAP3Q86VI3 1631 aa12.8□□□□□ -0.36
SPARC-208ENST00000538026 TET3O43151 1660 aa12.8□□□□□ -0.36
SPARC-208ENST00000538026 ILDR1Q86SU0 546 aaPredicted RBP12.8□□□□□ -0.36
SPARC-208ENST00000538026 E9PCH4 1651 aa12.8□□□□□ -0.36
SPARC-208ENST00000538026 PKD2Q13563 968 aa12.79□□□□□ -0.36
SPARC-208ENST00000538026 DMRT2Q9Y5R5 561 aa12.79□□□□□ -0.36
SPARC-208ENST00000538026 PIK3C2BO00750 1634 aa12.79□□□□□ -0.36
SPARC-208ENST00000538026 LTBP4Q8N2S1 1624 aa12.79□□□□□ -0.36
SPARC-208ENST00000538026 NUP155O75694 1391 aa12.79□□□□□ -0.36
SPARC-208ENST00000538026 GCC2Q8IWJ2 1684 aa12.78□□□□□ -0.36
SPARC-208ENST00000538026 THEMISQ8N1K5 641 aaPredicted RBP12.78□□□□□ -0.36
SPARC-208ENST00000538026 HFM1A2PYH4 1435 aa12.78□□□□□ -0.36
SPARC-208ENST00000538026 POLR1AO95602 1720 aaPredicted RBP12.77□□□□□ -0.36
SPARC-208ENST00000538026 LTKP29376 864 aa12.77□□□□□ -0.37
SPARC-208ENST00000538026 ARHGAP23Q9P227 1491 aa12.77□□□□□ -0.37
SPARC-208ENST00000538026 RPRD2Q5VT52 1461 aaKnown RBP12.76□□□□□ -0.37
SPARC-208ENST00000538026 MYO5BQ9ULV0 1848 aa12.76□□□□□ -0.37
SPARC-208ENST00000538026 MED14O60244 1454 aa12.75□□□□□ -0.37
SPARC-208ENST00000538026 CERKQ8TCT0 537 aa12.75□□□□□ -0.37
SPARC-208ENST00000538026 SLIT1O75093 1534 aa12.74□□□□□ -0.37
SPARC-208ENST00000538026 ZNF335Q9H4Z2 1342 aaPredicted RBP12.74□□□□□ -0.37
SPARC-208ENST00000538026 ANKLE2Q86XL3 938 aa12.74□□□□□ -0.37
SPARC-208ENST00000538026 KDM5AP29375 1690 aaKnown RBP12.73□□□□□ -0.37
SPARC-208ENST00000538026 SLC52A1Q9NWF4 448 aa12.72□□□□□ -0.37
SPARC-208ENST00000538026 NPHP4O75161 1426 aaPredicted RBP12.71□□□□□ -0.37
SPARC-208ENST00000538026 TMEM2Q9UHN6 1383 aa12.71□□□□□ -0.37
SPARC-208ENST00000538026 TMEM131LA2VDJ0 1609 aa12.71□□□□□ -0.37
SPARC-208ENST00000538026 STRCP1A6NGW2 1772 aa12.71□□□□□ -0.38
SPARC-208ENST00000538026 TXNDC2Q86VQ3 553 aa12.7□□□□□ -0.38
SPARC-208ENST00000538026 ADGRB3O60242 1522 aa12.7□□□□□ -0.38
SPARC-208ENST00000538026 SCAF11Q99590 1463 aaKnown RBP12.7□□□□□ -0.38
SPARC-208ENST00000538026 IQGAP1P46940 1657 aa12.7□□□□□ -0.38
SPARC-208ENST00000538026 FBXO41Q8TF61 875 aa12.69□□□□□ -0.38
SPARC-208ENST00000538026 ZFYVE9O95405 1425 aa12.69□□□□□ -0.38
SPARC-208ENST00000538026 SPHKAPQ2M3C7 1700 aa12.68□□□□□ -0.38
SPARC-208ENST00000538026 FOXD1Q16676 465 aa12.66□□□□□ -0.38
SPARC-208ENST00000538026 TRIM52Q96A61 297 aa12.66□□□□□ -0.38
SPARC-208ENST00000538026 STAG3Q9UJ98 1225 aa12.65□□□□□ -0.38
SPARC-208ENST00000538026 CLTCL1P53675 1640 aa12.65□□□□□ -0.38
SPARC-208ENST00000538026 SETD5Q9C0A6 1442 aa12.63□□□□□ -0.39
SPARC-208ENST00000538026 RIMS2Q9UQ26 1411 aa12.63□□□□□ -0.39
SPARC-208ENST00000538026 NUTM2DQ5VT03 806 aaPredicted RBP12.63□□□□□ -0.39
SPARC-208ENST00000538026 SLC4A1APQ9BWU0 796 aaKnown RBP12.63□□□□□ -0.39
SPARC-208ENST00000538026 SENP3Q9H4L4 574 aaPredicted RBP12.63□□□□□ -0.39
SPARC-208ENST00000538026 EID1Q9Y6B2 187 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms