RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 KDM5DQ9BY66 1539 aa20.72■□□□□ 0.91
RPAIN-205ENST00000536255 ANKRD30AQ9BXX3 1397 aa20.72■□□□□ 0.91
RPAIN-205ENST00000536255 RNF17Q9BXT8 1623 aaKnown RBP20.71■□□□□ 0.91
RPAIN-205ENST00000536255 RRP7BPQ9NSQ0 103 aa20.71■□□□□ 0.91
RPAIN-205ENST00000536255 CHIC2Q9UKJ5 165 aa20.71■□□□□ 0.91
RPAIN-205ENST00000536255 NPATQ14207 1427 aa20.7■□□□□ 0.9
RPAIN-205ENST00000536255 ERBINQ96RT1 1412 aa20.7■□□□□ 0.9
RPAIN-205ENST00000536255 UHRF1BP1Q6BDS2 1440 aa20.7■□□□□ 0.9
RPAIN-205ENST00000536255 ADGRL2O95490 1459 aa20.69■□□□□ 0.9
RPAIN-205ENST00000536255 NCOA1Q15788 1441 aa20.69■□□□□ 0.9
RPAIN-205ENST00000536255 HSPA2P54652 639 aa20.68■□□□□ 0.9
RPAIN-205ENST00000536255 WASHC2CQ9Y4E1 1318 aa20.68■□□□□ 0.9
RPAIN-205ENST00000536255 PTPRKQ15262 1439 aa20.66■□□□□ 0.9
RPAIN-205ENST00000536255 MROH1Q8NDA8 1641 aa20.66■□□□□ 0.9
RPAIN-205ENST00000536255 SETD1BQ9UPS6 1966 aaKnown RBP20.66■□□□□ 0.9
RPAIN-205ENST00000536255 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.65■□□□□ 0.9
RPAIN-205ENST00000536255 RRBP1Q9P2E9 1410 aaKnown RBP20.63■□□□□ 0.89
RPAIN-205ENST00000536255 ZC3H13Q5T200 1668 aaKnown RBP20.63■□□□□ 0.89
RPAIN-205ENST00000536255 ABCC3O15438 1527 aa20.63■□□□□ 0.89
RPAIN-205ENST00000536255 PRDM15P57071 1507 aaPredicted RBP20.63■□□□□ 0.89
RPAIN-205ENST00000536255 PZPP20742 1482 aa20.62■□□□□ 0.89
RPAIN-205ENST00000536255 DEPDC5O75140 1603 aa20.6■□□□□ 0.89
RPAIN-205ENST00000536255 MYO3AQ8NEV4 1616 aa20.58■□□□□ 0.89
RPAIN-205ENST00000536255 ROCK1Q13464 1354 aa20.58■□□□□ 0.88
RPAIN-205ENST00000536255 FBXO31Q5XUX0 539 aaPredicted RBP20.57■□□□□ 0.88
RPAIN-205ENST00000536255 ANKRD50Q9ULJ7 1429 aa20.57■□□□□ 0.88
RPAIN-205ENST00000536255 ITGAEP38570 1179 aa20.56■□□□□ 0.88
RPAIN-205ENST00000536255 CEP152O94986 1710 aa20.56■□□□□ 0.88
RPAIN-205ENST00000536255 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.55■□□□□ 0.882e-6■□□□□ 10.3
RPAIN-205ENST00000536255 KANK1Q14678 1352 aa20.55■□□□□ 0.88
RPAIN-205ENST00000536255 TNRQ92752 1358 aa20.55■□□□□ 0.88
RPAIN-205ENST00000536255 ZNF142P52746 1687 aaPredicted RBP20.54■□□□□ 0.88
RPAIN-205ENST00000536255 CAMSAP1Q5T5Y3 1602 aa20.54■□□□□ 0.88
RPAIN-205ENST00000536255 CEP170BQ9Y4F5 1589 aaPredicted RBP20.54■□□□□ 0.88
RPAIN-205ENST00000536255 VWDEQ8N2E2 1590 aa20.51■□□□□ 0.87
RPAIN-205ENST00000536255 ARHGAP31Q2M1Z3 1444 aa20.51■□□□□ 0.87
RPAIN-205ENST00000536255 A2ML1A8K2U0 1454 aa20.5■□□□□ 0.87
RPAIN-205ENST00000536255 LMTK2Q8IWU2 1503 aa20.5■□□□□ 0.87
RPAIN-205ENST00000536255 SPATA31D1Q6ZQQ2 1576 aa20.5■□□□□ 0.87
RPAIN-205ENST00000536255 ERVK-7P63135 1459 aa20.5■□□□□ 0.87
RPAIN-205ENST00000536255 STRCQ7RTU9 1775 aa20.49■□□□□ 0.87
RPAIN-205ENST00000536255 NLRP1Q9C000 1473 aa20.48■□□□□ 0.87
RPAIN-205ENST00000536255 PLA2R1Q13018 1463 aa20.45■□□□□ 0.86
RPAIN-205ENST00000536255 DMRT2Q9Y5R5 561 aa20.45■□□□□ 0.86
RPAIN-205ENST00000536255 UNC13BO14795 1591 aa20.45■□□□□ 0.86
RPAIN-205ENST00000536255 EFCAB6Q5THR3 1501 aa20.44■□□□□ 0.86
RPAIN-205ENST00000536255 PTPRTO14522 1441 aa20.41■□□□□ 0.86
RPAIN-205ENST00000536255 UGGT1Q9NYU2 1555 aa20.4■□□□□ 0.86
RPAIN-205ENST00000536255 NCKAP5LQ9HCH0 1330 aa20.38■□□□□ 0.85
RPAIN-205ENST00000536255 PKD2Q13563 968 aa20.38■□□□□ 0.85
RPAIN-205ENST00000536255 TET3O43151 1660 aa20.38■□□□□ 0.85
RPAIN-205ENST00000536255 RPRD2Q5VT52 1461 aaKnown RBP20.37■□□□□ 0.85
RPAIN-205ENST00000536255 NAIPQ13075 1403 aa20.37■□□□□ 0.85
RPAIN-205ENST00000536255 THEMISQ8N1K5 641 aaPredicted RBP20.37■□□□□ 0.85
RPAIN-205ENST00000536255 IQGAP3Q86VI3 1631 aa20.36■□□□□ 0.85
RPAIN-205ENST00000536255 CFAP65Q6ZU64 1925 aaKnown RBP20.36■□□□□ 0.85
RPAIN-205ENST00000536255 NOS1P29475 1434 aa20.36■□□□□ 0.85
RPAIN-205ENST00000536255 GCC2Q8IWJ2 1684 aa20.35■□□□□ 0.85
RPAIN-205ENST00000536255 HFM1A2PYH4 1435 aa20.35■□□□□ 0.85
RPAIN-205ENST00000536255 NUP155O75694 1391 aa20.34■□□□□ 0.85
RPAIN-205ENST00000536255 SYNMO15061 1565 aa20.34■□□□□ 0.85
RPAIN-205ENST00000536255 UBR1Q8IWV7 1749 aa20.32■□□□□ 0.84
RPAIN-205ENST00000536255 POLR1AO95602 1720 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-205ENST00000536255 PIK3C2BO00750 1634 aa20.3■□□□□ 0.84
RPAIN-205ENST00000536255 NEURL4Q96JN8 1562 aa20.29■□□□□ 0.84
RPAIN-205ENST00000536255 ANKLE2Q86XL3 938 aa20.29■□□□□ 0.84
RPAIN-205ENST00000536255 IDI1Q13907 227 aa20.28■□□□□ 0.84
RPAIN-205ENST00000536255 E9PCH4 1651 aa20.28■□□□□ 0.84
RPAIN-205ENST00000536255 SLC52A1Q9NWF4 448 aa20.27■□□□□ 0.84
RPAIN-205ENST00000536255 KDM5AP29375 1690 aaKnown RBP20.26■□□□□ 0.83
RPAIN-205ENST00000536255 MED14O60244 1454 aa20.25■□□□□ 0.83
RPAIN-205ENST00000536255 ARHGAP23Q9P227 1491 aa20.25■□□□□ 0.83
RPAIN-205ENST00000536255 SENP3Q9H4L4 574 aaPredicted RBP20.25■□□□□ 0.83
RPAIN-205ENST00000536255 STAG3Q9UJ98 1225 aa20.25■□□□□ 0.83
RPAIN-205ENST00000536255 SLIT1O75093 1534 aa20.25■□□□□ 0.83
RPAIN-205ENST00000536255 ADGRB3O60242 1522 aa20.24■□□□□ 0.83
RPAIN-205ENST00000536255 CERKQ8TCT0 537 aa20.24■□□□□ 0.83
RPAIN-205ENST00000536255 NPHP4O75161 1426 aaPredicted RBP20.24■□□□□ 0.83
RPAIN-205ENST00000536255 LTBP4Q8N2S1 1624 aa20.22■□□□□ 0.83
RPAIN-205ENST00000536255 SCAF11Q99590 1463 aaKnown RBP20.22■□□□□ 0.83
RPAIN-205ENST00000536255 TMEM2Q9UHN6 1383 aa20.21■□□□□ 0.83
RPAIN-205ENST00000536255 ZNF335Q9H4Z2 1342 aaPredicted RBP20.21■□□□□ 0.83
RPAIN-205ENST00000536255 ACIN1Q9UKV3 1341 aaKnown RBP20.21■□□□□ 0.83
RPAIN-205ENST00000536255 ILDR1Q86SU0 546 aaPredicted RBP20.2■□□□□ 0.82
RPAIN-205ENST00000536255 TRIM52Q96A61 297 aa20.19■□□□□ 0.82
RPAIN-205ENST00000536255 IQGAP1P46940 1657 aa20.19■□□□□ 0.82
RPAIN-205ENST00000536255 SETD5Q9C0A6 1442 aa20.19■□□□□ 0.82
RPAIN-205ENST00000536255 LTKP29376 864 aa20.18■□□□□ 0.82
RPAIN-205ENST00000536255 TXNDC2Q86VQ3 553 aa20.18■□□□□ 0.82
RPAIN-205ENST00000536255 FBXO41Q8TF61 875 aa20.18■□□□□ 0.82
RPAIN-205ENST00000536255 EID1Q9Y6B2 187 aa20.18■□□□□ 0.82
RPAIN-205ENST00000536255 TMEM131LA2VDJ0 1609 aa20.16■□□□□ 0.82
RPAIN-205ENST00000536255 SPHKAPQ2M3C7 1700 aa20.15■□□□□ 0.82
RPAIN-205ENST00000536255 TRIM26Q12899 539 aaPredicted RBP20.13■□□□□ 0.81
RPAIN-205ENST00000536255 SLC4A1APQ9BWU0 796 aaKnown RBP20.12■□□□□ 0.81
RPAIN-205ENST00000536255 TRPM2O94759 1503 aa20.12■□□□□ 0.81
RPAIN-205ENST00000536255 IQSEC2Q5JU85 1478 aa20.11■□□□□ 0.81
RPAIN-205ENST00000536255 ZFYVE9O95405 1425 aa20.11■□□□□ 0.81
RPAIN-205ENST00000536255 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
RPAIN-205ENST00000536255 MYO5BQ9ULV0 1848 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms