RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 PPP6R1Q9UPN7 881 aa19.81■□□□□ 0.76
TMEM258-202ENST00000535042 PTPRMP28827 1452 aa19.8■□□□□ 0.76
TMEM258-202ENST00000535042 HFM1A2PYH4 1435 aa19.8■□□□□ 0.76
TMEM258-202ENST00000535042 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.8■□□□□ 0.76
TMEM258-202ENST00000535042 RIMS1Q86UR5 1692 aaKnown RBP19.8■□□□□ 0.76
TMEM258-202ENST00000535042 ESF1Q9H501 851 aaKnown RBP19.79■□□□□ 0.76
TMEM258-202ENST00000535042 FER1L4A9Z1Z3 1794 aa19.79■□□□□ 0.76
TMEM258-202ENST00000535042 CEBPAP49715 358 aaPredicted RBP19.78■□□□□ 0.76
TMEM258-202ENST00000535042 WASHC2CQ9Y4E1 1318 aa19.77■□□□□ 0.76
TMEM258-202ENST00000535042 PLPPR3Q6T4P5 718 aa19.77■□□□□ 0.76
TMEM258-202ENST00000535042 CNTLNQ9NXG0 1405 aa19.76■□□□□ 0.75
TMEM258-202ENST00000535042 DEPDC5O75140 1603 aa19.76■□□□□ 0.75
TMEM258-202ENST00000535042 PRDM15P57071 1507 aaPredicted RBP19.76■□□□□ 0.75
TMEM258-202ENST00000535042 ZMYM3Q14202 1370 aa19.75■□□□□ 0.75
TMEM258-202ENST00000535042 ABCC3O15438 1527 aa19.74■□□□□ 0.75
TMEM258-202ENST00000535042 KDM5DQ9BY66 1539 aa19.74■□□□□ 0.75
TMEM258-202ENST00000535042 CLTCQ00610 1675 aaKnown RBP19.74■□□□□ 0.75
TMEM258-202ENST00000535042 GCC2Q8IWJ2 1684 aa19.74■□□□□ 0.75
TMEM258-202ENST00000535042 VWDEQ8N2E2 1590 aa19.72■□□□□ 0.75
TMEM258-202ENST00000535042 FAM135AQ9P2D6 1515 aa19.71■□□□□ 0.75
TMEM258-202ENST00000535042 KANK1Q14678 1352 aa19.7■□□□□ 0.74
TMEM258-202ENST00000535042 UNC13BO14795 1591 aa19.7■□□□□ 0.74
TMEM258-202ENST00000535042 SETD5Q9C0A6 1442 aa19.69■□□□□ 0.74
TMEM258-202ENST00000535042 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
TMEM258-202ENST00000535042 NUP155O75694 1391 aa19.69■□□□□ 0.74
TMEM258-202ENST00000535042 MROH2AA6NES4 1674 aa19.68■□□□□ 0.74
TMEM258-202ENST00000535042 C3P01024 1663 aa19.68■□□□□ 0.74
TMEM258-202ENST00000535042 LMTK2Q8IWU2 1503 aa19.67■□□□□ 0.74
TMEM258-202ENST00000535042 FBXO31Q5XUX0 539 aaPredicted RBP19.67■□□□□ 0.74
TMEM258-202ENST00000535042 CEP152O94986 1710 aa19.67■□□□□ 0.74
TMEM258-202ENST00000535042 ZC3H13Q5T200 1668 aaKnown RBP19.65■□□□□ 0.74
TMEM258-202ENST00000535042 TRIM52Q96A61 297 aa19.64■□□□□ 0.73
TMEM258-202ENST00000535042 RAB3GAP2Q9H2M9 1393 aa19.64■□□□□ 0.73
TMEM258-202ENST00000535042 PZPP20742 1482 aa19.64■□□□□ 0.73
TMEM258-202ENST00000535042 CAMSAP1Q5T5Y3 1602 aa19.63■□□□□ 0.73
TMEM258-202ENST00000535042 ARHGAP31Q2M1Z3 1444 aa19.63■□□□□ 0.73
TMEM258-202ENST00000535042 NPATQ14207 1427 aa19.62■□□□□ 0.73
TMEM258-202ENST00000535042 IQGAP3Q86VI3 1631 aa19.62■□□□□ 0.73
TMEM258-202ENST00000535042 EFCAB6Q5THR3 1501 aa19.59■□□□□ 0.73
TMEM258-202ENST00000535042 ERVK-7P63135 1459 aa19.58■□□□□ 0.72
TMEM258-202ENST00000535042 TET3O43151 1660 aa19.57■□□□□ 0.72
TMEM258-202ENST00000535042 TNRQ92752 1358 aa19.57■□□□□ 0.72
TMEM258-202ENST00000535042 HRCP23327 699 aa19.55■□□□□ 0.72
TMEM258-202ENST00000535042 SPATA31D1Q6ZQQ2 1576 aa19.55■□□□□ 0.72
TMEM258-202ENST00000535042 SLC4A1APQ9BWU0 796 aaKnown RBP19.54■□□□□ 0.72
TMEM258-202ENST00000535042 SENP3Q9H4L4 574 aaPredicted RBP19.54■□□□□ 0.72
TMEM258-202ENST00000535042 NOS1P29475 1434 aa19.53■□□□□ 0.72
TMEM258-202ENST00000535042 MPHOSPH9Q99550 1183 aa19.53■□□□□ 0.72
TMEM258-202ENST00000535042 RPRD2Q5VT52 1461 aaKnown RBP19.53■□□□□ 0.72
TMEM258-202ENST00000535042 E9PCH4 1651 aa19.52■□□□□ 0.72
TMEM258-202ENST00000535042 PKD2Q13563 968 aa19.52■□□□□ 0.72
TMEM258-202ENST00000535042 LMTK3Q96Q04 1460 aa19.52■□□□□ 0.72
TMEM258-202ENST00000535042 PREX1Q8TCU6 1659 aa19.52■□□□□ 0.71
TMEM258-202ENST00000535042 UHRF1BP1Q6BDS2 1440 aa19.51■□□□□ 0.71
TMEM258-202ENST00000535042 ACIN1Q9UKV3 1341 aaKnown RBP19.51■□□□□ 0.71
TMEM258-202ENST00000535042 FOXD1Q16676 465 aa19.49■□□□□ 0.71
TMEM258-202ENST00000535042 SETD1BQ9UPS6 1966 aaKnown RBP19.49■□□□□ 0.71
TMEM258-202ENST00000535042 CFAP65Q6ZU64 1925 aaKnown RBP19.49■□□□□ 0.71
TMEM258-202ENST00000535042 SYNMO15061 1565 aa19.49■□□□□ 0.71
TMEM258-202ENST00000535042 MYO3AQ8NEV4 1616 aa19.48■□□□□ 0.71
TMEM258-202ENST00000535042 HSPA2P54652 639 aa19.48■□□□□ 0.71
TMEM258-202ENST00000535042 IDI1Q13907 227 aa19.47■□□□□ 0.71
TMEM258-202ENST00000535042 PCGF6Q9BYE7 350 aa19.47■□□□□ 0.71
TMEM258-202ENST00000535042 PTPRTO14522 1441 aa19.46■□□□□ 0.71
TMEM258-202ENST00000535042 NLRP1Q9C000 1473 aa19.46■□□□□ 0.71
TMEM258-202ENST00000535042 A2ML1A8K2U0 1454 aa19.45■□□□□ 0.7
TMEM258-202ENST00000535042 PLA2R1Q13018 1463 aa19.45■□□□□ 0.7
TMEM258-202ENST00000535042 CEP170BQ9Y4F5 1589 aaPredicted RBP19.44■□□□□ 0.7
TMEM258-202ENST00000535042 UGGT1Q9NYU2 1555 aa19.43■□□□□ 0.7
TMEM258-202ENST00000535042 SLC52A1Q9NWF4 448 aa19.42■□□□□ 0.7
TMEM258-202ENST00000535042 ZNF142P52746 1687 aaPredicted RBP19.41■□□□□ 0.7
TMEM258-202ENST00000535042 PIK3C2BO00750 1634 aa19.38■□□□□ 0.69
TMEM258-202ENST00000535042 SPHKAPQ2M3C7 1700 aa19.37■□□□□ 0.69
TMEM258-202ENST00000535042 TRPM2O94759 1503 aa19.37■□□□□ 0.69
TMEM258-202ENST00000535042 THEMISQ8N1K5 641 aaPredicted RBP19.37■□□□□ 0.69
TMEM258-202ENST00000535042 STAG3Q9UJ98 1225 aa19.35■□□□□ 0.69
TMEM258-202ENST00000535042 CLTCL1P53675 1640 aa19.34■□□□□ 0.69
TMEM258-202ENST00000535042 CHGAP10645 457 aaKnown RBP19.34■□□□□ 0.69
TMEM258-202ENST00000535042 UBR1Q8IWV7 1749 aa19.34■□□□□ 0.69
TMEM258-202ENST00000535042 ADGRB3O60242 1522 aa19.33■□□□□ 0.68
TMEM258-202ENST00000535042 ANKRD30BQ9BXX2 1392 aa19.32■□□□□ 0.68
TMEM258-202ENST00000535042 NCKAP5LQ9HCH0 1330 aa19.32■□□□□ 0.68
TMEM258-202ENST00000535042 PHF23Q9BUL5 403 aaPredicted RBP19.31■□□□□ 0.68
TMEM258-202ENST00000535042 TMEM131LA2VDJ0 1609 aa19.31■□□□□ 0.68
TMEM258-202ENST00000535042 DHX57Q6P158 1386 aaKnown RBP19.31■□□□□ 0.68
TMEM258-202ENST00000535042 TMEM2Q9UHN6 1383 aa19.3■□□□□ 0.68
TMEM258-202ENST00000535042 ARHGAP23Q9P227 1491 aa19.29■□□□□ 0.68
TMEM258-202ENST00000535042 CCDC144AA2RUR9 1427 aa19.29■□□□□ 0.68
TMEM258-202ENST00000535042 KDM5AP29375 1690 aaKnown RBP19.28■□□□□ 0.68
TMEM258-202ENST00000535042 LTKP29376 864 aa19.28■□□□□ 0.68
TMEM258-202ENST00000535042 SLIT1O75093 1534 aa19.28■□□□□ 0.68
TMEM258-202ENST00000535042 STRCQ7RTU9 1775 aa19.27■□□□□ 0.68
TMEM258-202ENST00000535042 ANKLE2Q86XL3 938 aa19.27■□□□□ 0.68
TMEM258-202ENST00000535042 TXNDC2Q86VQ3 553 aa19.26■□□□□ 0.67
TMEM258-202ENST00000535042 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
TMEM258-202ENST00000535042 RIMS2Q9UQ26 1411 aa19.24■□□□□ 0.67
TMEM258-202ENST00000535042 MYO5BQ9ULV0 1848 aa19.23■□□□□ 0.67
TMEM258-202ENST00000535042 NUTM2DQ5VT03 806 aaPredicted RBP19.23■□□□□ 0.67
TMEM258-202ENST00000535042 SPATA31E1Q6ZUB1 1445 aa19.23■□□□□ 0.67
TMEM258-202ENST00000535042 SCAF11Q99590 1463 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms