RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 ANKRD30AQ9BXX3 1397 aa21.48■■□□□ 1.03
VPS11-205ENST00000534551 DEPDC5O75140 1603 aa21.48■■□□□ 1.03
VPS11-205ENST00000534551 PLPPR3Q6T4P5 718 aa21.48■■□□□ 1.03
VPS11-205ENST00000534551 KIF3BO15066 747 aa21.47■■□□□ 1.03
VPS11-205ENST00000534551 ERBINQ96RT1 1412 aa21.46■■□□□ 1.03
VPS11-205ENST00000534551 GGT6Q6P531 493 aa21.45■■□□□ 1.02
VPS11-205ENST00000534551 GCC2Q8IWJ2 1684 aa21.44■■□□□ 1.02
VPS11-205ENST00000534551 PRDM15P57071 1507 aaPredicted RBP21.44■■□□□ 1.02
VPS11-205ENST00000534551 KDM5DQ9BY66 1539 aa21.44■■□□□ 1.02
VPS11-205ENST00000534551 ZC3H13Q5T200 1668 aaKnown RBP21.43■■□□□ 1.02
VPS11-205ENST00000534551 ABCC3O15438 1527 aa21.41■■□□□ 1.02
VPS11-205ENST00000534551 CAMSAP1Q5T5Y3 1602 aa21.4■■□□□ 1.02
VPS11-205ENST00000534551 ROCK1Q13464 1354 aa21.4■■□□□ 1.02
VPS11-205ENST00000534551 CEBPAP49715 358 aaPredicted RBP21.4■■□□□ 1.02
VPS11-205ENST00000534551 UNC13BO14795 1591 aa21.39■■□□□ 1.01
VPS11-205ENST00000534551 CNTLNQ9NXG0 1405 aa21.38■■□□□ 1.01
VPS11-205ENST00000534551 ANKRD50Q9ULJ7 1429 aa21.38■■□□□ 1.01
VPS11-205ENST00000534551 FAM135AQ9P2D6 1515 aa21.37■■□□□ 1.01
VPS11-205ENST00000534551 PREX1Q8TCU6 1659 aa21.36■■□□□ 1.01
VPS11-205ENST00000534551 CFAP65Q6ZU64 1925 aaKnown RBP21.35■■□□□ 1.01
VPS11-205ENST00000534551 ESF1Q9H501 851 aaKnown RBP21.34■■□□□ 1.01
VPS11-205ENST00000534551 VWDEQ8N2E2 1590 aa21.34■■□□□ 1.01
VPS11-205ENST00000534551 MYO3AQ8NEV4 1616 aa21.33■■□□□ 1
VPS11-205ENST00000534551 NAIPQ13075 1403 aa21.31■■□□□ 1
VPS11-205ENST00000534551 ZMYM3Q14202 1370 aa21.31■■□□□ 1
VPS11-205ENST00000534551 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.3■■□□□ 1
VPS11-205ENST00000534551 LMTK3Q96Q04 1460 aa21.3■■□□□ 1
VPS11-205ENST00000534551 PZPP20742 1482 aa21.29■■□□□ 1
VPS11-205ENST00000534551 IQGAP3Q86VI3 1631 aa21.28■■□□□ 1
VPS11-205ENST00000534551 WASHC2CQ9Y4E1 1318 aa21.28■■□□□ 1
VPS11-205ENST00000534551 HFM1A2PYH4 1435 aa21.27■■□□□ 1
VPS11-205ENST00000534551 EFCAB6Q5THR3 1501 aa21.26■□□□□ 0.99
VPS11-205ENST00000534551 TET3O43151 1660 aa21.26■□□□□ 0.99
VPS11-205ENST00000534551 SETD1BQ9UPS6 1966 aaKnown RBP21.26■□□□□ 0.99
VPS11-205ENST00000534551 ZNF142P52746 1687 aaPredicted RBP21.24■□□□□ 0.99
VPS11-205ENST00000534551 LMTK2Q8IWU2 1503 aa21.24■□□□□ 0.99
VPS11-205ENST00000534551 PPP6R1Q9UPN7 881 aa21.24■□□□□ 0.99
VPS11-205ENST00000534551 NPATQ14207 1427 aa21.23■□□□□ 0.99
VPS11-205ENST00000534551 E9PCH4 1651 aa21.23■□□□□ 0.99
VPS11-205ENST00000534551 SPATA31D1Q6ZQQ2 1576 aa21.23■□□□□ 0.99
VPS11-205ENST00000534551 ERVK-7P63135 1459 aa21.22■□□□□ 0.99
VPS11-205ENST00000534551 KANK1Q14678 1352 aa21.22■□□□□ 0.99
VPS11-205ENST00000534551 FBXO31Q5XUX0 539 aaPredicted RBP21.21■□□□□ 0.99
VPS11-205ENST00000534551 CEP170BQ9Y4F5 1589 aaPredicted RBP21.2■□□□□ 0.98
VPS11-205ENST00000534551 UHRF1BP1Q6BDS2 1440 aa21.2■□□□□ 0.98
VPS11-205ENST00000534551 SYNMO15061 1565 aa21.18■□□□□ 0.98
VPS11-205ENST00000534551 TNRQ92752 1358 aa21.16■□□□□ 0.98
VPS11-205ENST00000534551 HSPA2P54652 639 aa21.16■□□□□ 0.98
VPS11-205ENST00000534551 ARHGAP31Q2M1Z3 1444 aa21.15■□□□□ 0.98
VPS11-205ENST00000534551 NUP155O75694 1391 aa21.14■□□□□ 0.98
VPS11-205ENST00000534551 SPHKAPQ2M3C7 1700 aa21.12■□□□□ 0.97
VPS11-205ENST00000534551 PIK3C2BO00750 1634 aa21.11■□□□□ 0.97
VPS11-205ENST00000534551 STRCQ7RTU9 1775 aa21.11■□□□□ 0.97
VPS11-205ENST00000534551 UGGT1Q9NYU2 1555 aa21.1■□□□□ 0.97
VPS11-205ENST00000534551 UBR1Q8IWV7 1749 aa21.1■□□□□ 0.97
VPS11-205ENST00000534551 MYO5BQ9ULV0 1848 aa21.1■□□□□ 0.97
VPS11-205ENST00000534551 A2ML1A8K2U0 1454 aa21.09■□□□□ 0.97
VPS11-205ENST00000534551 RPRD2Q5VT52 1461 aaKnown RBP21.08■□□□□ 0.97
VPS11-205ENST00000534551 NOS1P29475 1434 aa21.08■□□□□ 0.97
VPS11-205ENST00000534551 SETD5Q9C0A6 1442 aa21.08■□□□□ 0.97
VPS11-205ENST00000534551 RAB3GAP2Q9H2M9 1393 aa21.07■□□□□ 0.96
VPS11-205ENST00000534551 NLRP1Q9C000 1473 aa21.07■□□□□ 0.96
VPS11-205ENST00000534551 POLR1AO95602 1720 aaPredicted RBP21.05■□□□□ 0.96
VPS11-205ENST00000534551 TRIM52Q96A61 297 aa21.03■□□□□ 0.96
VPS11-205ENST00000534551 ADGRB3O60242 1522 aa21.01■□□□□ 0.95
VPS11-205ENST00000534551 CLTCL1P53675 1640 aa21■□□□□ 0.95
VPS11-205ENST00000534551 NEURL4Q96JN8 1562 aa20.98■□□□□ 0.95
VPS11-205ENST00000534551 KDM5AP29375 1690 aaKnown RBP20.98■□□□□ 0.95
VPS11-205ENST00000534551 TRPM2O94759 1503 aa20.97■□□□□ 0.95
VPS11-205ENST00000534551 TMEM131LA2VDJ0 1609 aa20.96■□□□□ 0.95
VPS11-205ENST00000534551 PLA2R1Q13018 1463 aa20.96■□□□□ 0.95
VPS11-205ENST00000534551 FOXD1Q16676 465 aa20.94■□□□□ 0.94
VPS11-205ENST00000534551 SLC4A1APQ9BWU0 796 aaKnown RBP20.94■□□□□ 0.94
VPS11-205ENST00000534551 PKD2Q13563 968 aa20.93■□□□□ 0.94
VPS11-205ENST00000534551 PTPRTO14522 1441 aa20.93■□□□□ 0.94
VPS11-205ENST00000534551 IDI1Q13907 227 aa20.92■□□□□ 0.94
VPS11-205ENST00000534551 KIF1BO60333 1816 aa20.91■□□□□ 0.94
VPS11-205ENST00000534551 NCKAP5LQ9HCH0 1330 aa20.9■□□□□ 0.94
VPS11-205ENST00000534551 SLIT1O75093 1534 aa20.89■□□□□ 0.94
VPS11-205ENST00000534551 IQGAP1P46940 1657 aa20.89■□□□□ 0.93
VPS11-205ENST00000534551 ARHGAP23Q9P227 1491 aa20.88■□□□□ 0.93
VPS11-205ENST00000534551 MPHOSPH9Q99550 1183 aa20.88■□□□□ 0.93
VPS11-205ENST00000534551 TRIM26Q12899 539 aaPredicted RBP20.86■□□□□ 0.93
VPS11-205ENST00000534551 SCAF11Q99590 1463 aaKnown RBP20.85■□□□□ 0.93
VPS11-205ENST00000534551 SLC52A1Q9NWF4 448 aa20.84■□□□□ 0.93
VPS11-205ENST00000534551 STAG3Q9UJ98 1225 aa20.84■□□□□ 0.93
VPS11-205ENST00000534551 THEMISQ8N1K5 641 aaPredicted RBP20.83■□□□□ 0.93
VPS11-205ENST00000534551 TMEM2Q9UHN6 1383 aa20.83■□□□□ 0.92
VPS11-205ENST00000534551 CHGAP10645 457 aaKnown RBP20.82■□□□□ 0.92
VPS11-205ENST00000534551 ZFYVE9O95405 1425 aa20.81■□□□□ 0.92
VPS11-205ENST00000534551 NPHP4O75161 1426 aaPredicted RBP20.79■□□□□ 0.92
VPS11-205ENST00000534551 LTKP29376 864 aa20.79■□□□□ 0.92
VPS11-205ENST00000534551 MED14O60244 1454 aa20.79■□□□□ 0.92
VPS11-205ENST00000534551 RIMS2Q9UQ26 1411 aa20.78■□□□□ 0.92
VPS11-205ENST00000534551 NEXMIFQ5QGS0 1516 aa20.78■□□□□ 0.92
VPS11-205ENST00000534551 SENP3Q9H4L4 574 aaPredicted RBP20.78■□□□□ 0.92
VPS11-205ENST00000534551 PPLO60437 1756 aa20.77■□□□□ 0.92
VPS11-205ENST00000534551 IFT172Q9UG01 1749 aa20.77■□□□□ 0.92
VPS11-205ENST00000534551 STRCP1A6NGW2 1772 aa20.77■□□□□ 0.91
VPS11-205ENST00000534551 ANKLE2Q86XL3 938 aa20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms