RNA–Protein interactions for RNA: ENST00000534348.5

NEDD8-MDP1-202, Transcript of NEDD8-MDP1 readthrough, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEDD8-MDP1, Length 595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-202ENST00000534348 PLXNC1O60486 1568 aa16.97■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 SETD1AO15047 1707 aaKnown RBP16.96■□□□□ 0.31
NEDD8-MDP1-202ENST00000534348 CDC42BPAQ5VT25 1732 aa16.95■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 EEA1Q15075 1411 aa16.95■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 CHIC1Q5VXU3 224 aa16.94■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 RNF17Q9BXT8 1623 aaKnown RBP16.94■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 STRCP1A6NGW2 1772 aa16.93■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 CFDP1Q9UEE9 299 aaPredicted RBP16.91■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 MED14O60244 1454 aa16.91■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 FAM135AQ9P2D6 1515 aa16.91■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 UGGT1Q9NYU2 1555 aa16.9■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 INO80Q9ULG1 1556 aaPredicted RBP16.9■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 KIF3BO15066 747 aa16.9■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 WASHC2CQ9Y4E1 1318 aa16.9■□□□□ 0.3
NEDD8-MDP1-202ENST00000534348 IQGAP1P46940 1657 aa16.89■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 UPF1Q92900 1129 aaKnown RBP eCLIP16.89■□□□□ 0.293e-7■□□□□ 10.1
NEDD8-MDP1-202ENST00000534348 GPATCH8Q9UKJ3 1502 aaKnown RBP16.89■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 MIA2Q96PC5 1412 aa16.88■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 TRIM52Q96A61 297 aa16.87■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 PZPP20742 1482 aa16.86■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 DEPDC5O75140 1603 aa16.86■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 KIAA1107Q9UPP5 1409 aa16.86■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 ZNF644Q9H582 1327 aaPredicted RBP16.85■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 SYNMO15061 1565 aa16.85■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 CCDC18Q5T9S5 1454 aa16.84■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 NLRP1Q9C000 1473 aa16.84■□□□□ 0.29
NEDD8-MDP1-202ENST00000534348 ADGBQ8N7X0 1667 aa16.83■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 PLEKHH2Q8IVE3 1493 aa16.82■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 FAM135BQ49AJ0 1406 aa16.82■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 DHX29Q7Z478 1369 aaKnown RBP16.82■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 RBM33Q96EV2 1170 aaKnown RBP16.82■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 KDM5DQ9BY66 1539 aa16.8■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 CASKIN1Q8WXD9 1431 aa16.8■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 CCNB3Q8WWL7 1395 aa16.8■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 LTKP29376 864 aa16.77■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 TXNDC2Q86VQ3 553 aa16.77■□□□□ 0.28
NEDD8-MDP1-202ENST00000534348 MEX3CQ5U5Q3 659 aaKnown RBP16.76■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 XIRP1Q702N8 1843 aaKnown RBP16.75■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 TMEM94Q12767 1356 aa16.75■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 ROBO1Q9Y6N7 1651 aa16.75■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 ZC3H13Q5T200 1668 aaKnown RBP16.74■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 SCAF11Q99590 1463 aaKnown RBP16.73■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 PROSER2Q86WR7 435 aaPredicted RBP16.72■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 MBD5Q9P267 1494 aa16.72■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 RTEL1-TNFRSF6BF6WH68 1400 aa16.71■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 JCADQ9P266 1359 aa16.71■□□□□ 0.27
NEDD8-MDP1-202ENST00000534348 ZNF772Q68DY9 489 aaPredicted RBP16.7■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 RXRBP28702 533 aa16.69■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 EID1Q9Y6B2 187 aa16.69■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 FYCO1Q9BQS8 1478 aa16.67■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 MTUS2Q5JR59 1369 aa16.66■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 SLC26A8Q96RN1 970 aa16.66■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 SLAIN2Q9P270 581 aa16.66■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 ERVK-7P63135 1459 aa16.66■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 PHLPP1O60346 1717 aa16.65■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 LRP6O75581 1613 aa16.65■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 NCOA2Q15596 1464 aa16.65■□□□□ 0.26
NEDD8-MDP1-202ENST00000534348 KCNA6P17658 529 aa16.64■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 UBR1Q8IWV7 1749 aa16.64■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 MAP3K1Q13233 1512 aa16.62■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 NUTM2BA6NNL0 878 aaPredicted RBP16.62■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 NUTM2EB1AL46 878 aaPredicted RBP16.62■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 NUTM2AQ8IVF1 878 aaPredicted RBP16.62■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 STAG3Q9UJ98 1225 aa16.62■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 CFAP65Q6ZU64 1925 aaKnown RBP16.62■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 LRRC9Q6ZRR7 1453 aa16.61■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 ABCC3O15438 1527 aa16.61■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 MSH6P52701 1360 aa16.61■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 CCDC141Q6ZP82 1450 aa16.61■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 TIAM1Q13009 1591 aa16.6■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 BCANQ96GW7 911 aa16.6■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 SPATA31A6Q5VVP1 1343 aa16.6■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 SLIT1O75093 1534 aa16.6■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 TSPY4P0CV99 314 aa16.59■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 TSPY10P0CW01 314 aa16.59■□□□□ 0.25
NEDD8-MDP1-202ENST00000534348 NUTM2DQ5VT03 806 aaPredicted RBP16.58■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 TMEM2Q9UHN6 1383 aa16.56■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 COL16A1Q07092 1604 aaPredicted RBP16.56■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 PRDM15P57071 1507 aaPredicted RBP16.55■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 RSPH4AQ5TD94 716 aa16.55■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 AFF2P51816 1311 aa16.54■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 C14orf37Q86TY3 774 aa16.54■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 CAMSAP2Q08AD1 1489 aa16.54■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
NEDD8-MDP1-202ENST00000534348 CEP152O94986 1710 aa16.51■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 CDK12Q9NYV4 1490 aaPredicted RBP16.51■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 FGD6Q6ZV73 1430 aa16.51■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 QTRT2Q9H974 415 aaKnown RBP16.5■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 RGS12O14924 1447 aa16.5■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 PIK3C2BO00750 1634 aa16.49■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.233e-7■■■□□ 14.6
NEDD8-MDP1-202ENST00000534348 NKTRP30414 1462 aaKnown RBP16.48■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 IDI1Q13907 227 aa16.48■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 C8orf37Q96NL8 207 aa16.48■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 TET3O43151 1660 aa16.47■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 RBM6P78332 1123 aaKnown RBP16.47■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 CEP162Q5TB80 1403 aa16.46■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 EHBP1L1Q8N3D4 1523 aa16.46■□□□□ 0.23
NEDD8-MDP1-202ENST00000534348 MROH1Q8NDA8 1641 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms