RNA–Protein interactions for RNA: ENST00000534300.5

AMBRA1-212, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 5,067 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-212ENST00000534300 ARHGAP5Q13017 1502 aa15.25■□□□□ 0.03
AMBRA1-212ENST00000534300 ERICH3Q5RHP9 1530 aa15.25■□□□□ 0.03
AMBRA1-212ENST00000534300 SAFB2Q14151 953 aaKnown RBP eCLIP15.25■□□□□ 0.03
AMBRA1-212ENST00000534300 CCDC9Q9Y3X0 531 aaKnown RBP15.25■□□□□ 0.03
AMBRA1-212ENST00000534300 PAK3O75914 559 aaPredicted RBP15.25■□□□□ 0.03
AMBRA1-212ENST00000534300 EFCAB5A4FU69 1503 aa15.23■□□□□ 0.03
AMBRA1-212ENST00000534300 MPHOSPH9Q99550 1183 aa15.23■□□□□ 0.03
AMBRA1-212ENST00000534300 GSE1Q14687 1217 aa15.23■□□□□ 0.03
AMBRA1-212ENST00000534300 FANCIQ9NVI1 1328 aa15.22■□□□□ 0.03
AMBRA1-212ENST00000534300 CC2D1BQ5T0F9 858 aaKnown RBP15.22■□□□□ 0.03
AMBRA1-212ENST00000534300 EIF3AQ14152 1382 aaKnown RBP15.22■□□□□ 0.03
AMBRA1-212ENST00000534300 CSB-PGBD3P0DP91 1061 aa15.21■□□□□ 0.03
AMBRA1-212ENST00000534300 CALD1Q05682 793 aaKnown RBP15.21■□□□□ 0.03
AMBRA1-212ENST00000534300 RWDD1Q9H446 243 aaPredicted RBP15.21■□□□□ 0.03
AMBRA1-212ENST00000534300 ZNF608Q9ULD9 1512 aaPredicted RBP15.21■□□□□ 0.03
AMBRA1-212ENST00000534300 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.02
AMBRA1-212ENST00000534300 CASKIN1Q8WXD9 1431 aa15.21■□□□□ 0.02
AMBRA1-212ENST00000534300 THEMISQ8N1K5 641 aaPredicted RBP15.2■□□□□ 0.02
AMBRA1-212ENST00000534300 CD109Q6YHK3 1445 aa15.19■□□□□ 0.02
AMBRA1-212ENST00000534300 AFAP1Q8N556 730 aa15.19■□□□□ 0.02
AMBRA1-212ENST00000534300 NPHP1O15259 732 aa15.18■□□□□ 0.02
AMBRA1-212ENST00000534300 OS9Q13438 667 aaPredicted RBP15.18■□□□□ 0.02
AMBRA1-212ENST00000534300 IQGAP2Q13576 1575 aa15.17■□□□□ 0.02
AMBRA1-212ENST00000534300 MEX3CQ5U5Q3 659 aaKnown RBP15.17■□□□□ 0.02
AMBRA1-212ENST00000534300 CUL7Q14999 1698 aa15.17■□□□□ 0.02
AMBRA1-212ENST00000534300 IPO8O15397 1037 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-212ENST00000534300 ATF3P18847 181 aa15.16■□□□□ 0.02
AMBRA1-212ENST00000534300 HTATSF1O43719 755 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-212ENST00000534300 HSPA5P11021 654 aaKnown RBP15.16■□□□□ 0.02
AMBRA1-212ENST00000534300 PLB1Q6P1J6 1458 aa15.16■□□□□ 0.02
AMBRA1-212ENST00000534300 CCDC144AA2RUR9 1427 aa15.15■□□□□ 0.02
AMBRA1-212ENST00000534300 TROQ12816 1431 aaPredicted RBP15.15■□□□□ 0.02
AMBRA1-212ENST00000534300 DDX11L8A8MPP1 907 aa15.15■□□□□ 0.02
AMBRA1-212ENST00000534300 PMFBP1Q8TBY8 1022 aa15.15■□□□□ 0.02
AMBRA1-212ENST00000534300 NAP1L2Q9ULW6 460 aaPredicted RBP15.15■□□□□ 0.02
AMBRA1-212ENST00000534300 KIF15Q9NS87 1388 aa15.14■□□□□ 0.01
AMBRA1-212ENST00000534300 U2SURPO15042 1029 aaKnown RBP15.14■□□□□ 0.01
AMBRA1-212ENST00000534300 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
AMBRA1-212ENST00000534300 NUTM2DQ5VT03 806 aaPredicted RBP15.14■□□□□ 0.01
AMBRA1-212ENST00000534300 SCAPERQ9BY12 1400 aa15.13■□□□□ 0.01
AMBRA1-212ENST00000534300 SOX12O15370 315 aa15.13■□□□□ 0.01
AMBRA1-212ENST00000534300 RAPGEF3O95398 923 aa15.13■□□□□ 0.01
AMBRA1-212ENST00000534300 GOLGA6L1Q8N7Z2 621 aa15.13■□□□□ 0.01
AMBRA1-212ENST00000534300 PRXQ9BXM0 1461 aa15.13■□□□□ 0.01
AMBRA1-212ENST00000534300 PDE3BQ13370 1112 aa15.13■□□□□ 0.01
AMBRA1-212ENST00000534300 RALBP1Q15311 655 aa15.12■□□□□ 0.01
AMBRA1-212ENST00000534300 FYCO1Q9BQS8 1478 aa15.12■□□□□ 0.01
AMBRA1-212ENST00000534300 DMRT2Q9Y5R5 561 aa15.12■□□□□ 0.01
AMBRA1-212ENST00000534300 KTN1Q86UP2 1357 aaKnown RBP15.11■□□□□ 0.01
AMBRA1-212ENST00000534300 KIAA1211Q6ZU35 1233 aa15.11■□□□□ 0.01
AMBRA1-212ENST00000534300 STAC3Q96MF2 364 aa15.11■□□□□ 0.01
AMBRA1-212ENST00000534300 PHF14O94880 888 aa15.1■□□□□ 0.01
AMBRA1-212ENST00000534300 ANKLE2Q86XL3 938 aa15.1■□□□□ 0.01
AMBRA1-212ENST00000534300 TEX14Q8IWB6 1497 aa15.1■□□□□ 0.01
AMBRA1-212ENST00000534300 KIF21BO75037 1637 aa15.1■□□□□ 0.01
AMBRA1-212ENST00000534300 MFAP1P55081 439 aaKnown RBP15.09■□□□□ 0.01
AMBRA1-212ENST00000534300 SKOR2Q2VWA4 1001 aaPredicted RBP15.09■□□□□ 0.01
AMBRA1-212ENST00000534300 ROCK2O75116 1388 aaKnown RBP15.09■□□□□ 0.01
AMBRA1-212ENST00000534300 PDE4AP27815 886 aa15.09■□□□□ 0.01
AMBRA1-212ENST00000534300 CSPP1Q1MSJ5 1256 aa15.09■□□□□ 0.01
AMBRA1-212ENST00000534300 HECW1Q76N89 1606 aa15.09■□□□□ 0.01
AMBRA1-212ENST00000534300 TPM4P67936 248 aa15.09■□□□□ 0.01
AMBRA1-212ENST00000534300 TXNDC2Q86VQ3 553 aa15.08■□□□□ 0.01
AMBRA1-212ENST00000534300 FOXD1Q16676 465 aa15.08■□□□□ 0
AMBRA1-212ENST00000534300 TAOK2Q9UL54 1235 aa15.08■□□□□ 0
AMBRA1-212ENST00000534300 MORC1Q86VD1 984 aa15.07■□□□□ 0
AMBRA1-212ENST00000534300 PROSER2Q86WR7 435 aaPredicted RBP15.06■□□□□ 0
AMBRA1-212ENST00000534300 RAB3GAP2Q9H2M9 1393 aa15.05■□□□□ -0
AMBRA1-212ENST00000534300 WDR62O43379 1518 aa15.05■□□□□ -0
AMBRA1-212ENST00000534300 FAM161AQ3B820 660 aa15.05■□□□□ -0
AMBRA1-212ENST00000534300 AKNAQ7Z591 1439 aa15.04■□□□□ -0
AMBRA1-212ENST00000534300 SLC52A1Q9NWF4 448 aa15.04■□□□□ -0
AMBRA1-212ENST00000534300 PHLDB1Q86UU1 1377 aa15.04■□□□□ -0
AMBRA1-212ENST00000534300 PHF23Q9BUL5 403 aaPredicted RBP15.04■□□□□ -0
AMBRA1-212ENST00000534300 ZNF644Q9H582 1327 aaPredicted RBP15.03■□□□□ -0
AMBRA1-212ENST00000534300 NCOA2Q15596 1464 aa15.03■□□□□ -0
AMBRA1-212ENST00000534300 FGD6Q6ZV73 1430 aa15.03■□□□□ -0
AMBRA1-212ENST00000534300 EVA1CP58658 441 aa15.03■□□□□ -0
AMBRA1-212ENST00000534300 TULP1O00294 542 aaPredicted RBP15.02■□□□□ -0
AMBRA1-212ENST00000534300 DDX49Q9Y6V7 483 aaKnown RBP15.02■□□□□ -0
AMBRA1-212ENST00000534300 ANKRD50Q9ULJ7 1429 aa15.02■□□□□ -0
AMBRA1-212ENST00000534300 GOLGA2Q08379 1002 aa15.02■□□□□ -0
AMBRA1-212ENST00000534300 ITPRIPQ8IWB1 547 aa15.02■□□□□ -0
AMBRA1-212ENST00000534300 GNL2Q13823 731 aaKnown RBP15.02□□□□□ -0.01
AMBRA1-212ENST00000534300 TRAK1Q9UPV9 953 aa15.02□□□□□ -0.01
AMBRA1-212ENST00000534300 CENPQQ7L2Z9 268 aaPredicted RBP15.02□□□□□ -0.01
AMBRA1-212ENST00000534300 NUTM2FA1L443 756 aa15.01□□□□□ -0.01
AMBRA1-212ENST00000534300 NOC3LQ8WTT2 800 aaKnown RBP15.01□□□□□ -0.01
AMBRA1-212ENST00000534300 CCDC34Q96HJ3 373 aa15.01□□□□□ -0.01
AMBRA1-212ENST00000534300 DENND4BO75064 1496 aaPredicted RBP15.01□□□□□ -0.01
AMBRA1-212ENST00000534300 PPP6R1Q9UPN7 881 aa15.01□□□□□ -0.01
AMBRA1-212ENST00000534300 RTF1Q92541 710 aaKnown RBP15.01□□□□□ -0.01
AMBRA1-212ENST00000534300 ST18O60284 1047 aa15□□□□□ -0.01
AMBRA1-212ENST00000534300 ZNF771Q7L3S4 317 aaPredicted RBP15□□□□□ -0.01
AMBRA1-212ENST00000534300 CHMP4AQ9BY43 222 aa15□□□□□ -0.01
AMBRA1-212ENST00000534300 SETQ01105 290 aaPredicted RBP15□□□□□ -0.01
AMBRA1-212ENST00000534300 EHBP1L1Q8N3D4 1523 aa15□□□□□ -0.01
AMBRA1-212ENST00000534300 PSME1Q06323 249 aa15□□□□□ -0.01
AMBRA1-212ENST00000534300 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.99□□□□□ -0.01
AMBRA1-212ENST00000534300 DHX57Q6P158 1386 aaKnown RBP14.99□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms