RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 GPATCH8Q9UKJ3 1502 aaKnown RBP20.33■□□□□ 0.85
KNL1-212ENST00000534204 SPAG9O60271 1321 aaKnown RBP20.33■□□□□ 0.85
KNL1-212ENST00000534204 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
KNL1-212ENST00000534204 CCDC18Q5T9S5 1454 aa20.3■□□□□ 0.84
KNL1-212ENST00000534204 NPHP4O75161 1426 aaPredicted RBP20.29■□□□□ 0.84
KNL1-212ENST00000534204 KIAA1107Q9UPP5 1409 aa20.29■□□□□ 0.84
KNL1-212ENST00000534204 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.29■□□□□ 0.84
KNL1-212ENST00000534204 PZPP20742 1482 aa20.29■□□□□ 0.84
KNL1-212ENST00000534204 HNRNPMP52272 730 aaKnown RBP eCLIP20.28■□□□□ 0.84
KNL1-212ENST00000534204 GGT6Q6P531 493 aa20.28■□□□□ 0.84
KNL1-212ENST00000534204 TNRQ92752 1358 aa20.28■□□□□ 0.84
KNL1-212ENST00000534204 CASKIN1Q8WXD9 1431 aa20.27■□□□□ 0.83
KNL1-212ENST00000534204 FBXO31Q5XUX0 539 aaPredicted RBP20.26■□□□□ 0.83
KNL1-212ENST00000534204 POTEAQ6S8J7 498 aa20.26■□□□□ 0.83
KNL1-212ENST00000534204 UGGT1Q9NYU2 1555 aa20.24■□□□□ 0.83
KNL1-212ENST00000534204 KDM5DQ9BY66 1539 aa20.23■□□□□ 0.83
KNL1-212ENST00000534204 FAM135AQ9P2D6 1515 aa20.23■□□□□ 0.83
KNL1-212ENST00000534204 ZNF777Q9ULD5 760 aaPredicted RBP20.23■□□□□ 0.83
KNL1-212ENST00000534204 PLEKHH2Q8IVE3 1493 aa20.22■□□□□ 0.83
KNL1-212ENST00000534204 NLRP1Q9C000 1473 aa20.21■□□□□ 0.83
KNL1-212ENST00000534204 ANKLE2Q86XL3 938 aa20.2■□□□□ 0.82
KNL1-212ENST00000534204 MBD5Q9P267 1494 aa20.19■□□□□ 0.82
KNL1-212ENST00000534204 MIA2Q96PC5 1412 aa20.17■□□□□ 0.82
KNL1-212ENST00000534204 UBR1Q8IWV7 1749 aa20.14■□□□□ 0.81
KNL1-212ENST00000534204 FYCO1Q9BQS8 1478 aa20.14■□□□□ 0.81
KNL1-212ENST00000534204 DHX29Q7Z478 1369 aaKnown RBP20.14■□□□□ 0.81
KNL1-212ENST00000534204 RTEL1-TNFRSF6BF6WH68 1400 aa20.13■□□□□ 0.81
KNL1-212ENST00000534204 TIAM1Q13009 1591 aa20.12■□□□□ 0.81
KNL1-212ENST00000534204 THEMISQ8N1K5 641 aaPredicted RBP20.12■□□□□ 0.81
KNL1-212ENST00000534204 ROBO1Q9Y6N7 1651 aa20.11■□□□□ 0.81
KNL1-212ENST00000534204 UBTFP17480 764 aaKnown RBP20.11■□□□□ 0.81
KNL1-212ENST00000534204 EHMT2Q96KQ7 1210 aa20.11■□□□□ 0.81
KNL1-212ENST00000534204 FAM135BQ49AJ0 1406 aa20.1■□□□□ 0.81
KNL1-212ENST00000534204 ZNF644Q9H582 1327 aaPredicted RBP20.08■□□□□ 0.81
KNL1-212ENST00000534204 CFDP1Q9UEE9 299 aaPredicted RBP20.07■□□□□ 0.8
KNL1-212ENST00000534204 NCOA2Q15596 1464 aa20.06■□□□□ 0.8
KNL1-212ENST00000534204 MAP3K1Q13233 1512 aa20.06■□□□□ 0.8
KNL1-212ENST00000534204 ARHGAP23Q9P227 1491 aa20.05■□□□□ 0.8
KNL1-212ENST00000534204 CCNB3Q8WWL7 1395 aa20.04■□□□□ 0.8
KNL1-212ENST00000534204 ABCC3O15438 1527 aa20.03■□□□□ 0.8
KNL1-212ENST00000534204 MROH1Q8NDA8 1641 aa20.03■□□□□ 0.8
KNL1-212ENST00000534204 KIF3BO15066 747 aa20.03■□□□□ 0.8
KNL1-212ENST00000534204 ERVK-7P63135 1459 aa20.03■□□□□ 0.8
KNL1-212ENST00000534204 SCAF11Q99590 1463 aaKnown RBP20.03■□□□□ 0.8
KNL1-212ENST00000534204 SLIT1O75093 1534 aa20.02■□□□□ 0.8
KNL1-212ENST00000534204 WASHC2CQ9Y4E1 1318 aa20■□□□□ 0.79
KNL1-212ENST00000534204 CEP152O94986 1710 aa19.99■□□□□ 0.79
KNL1-212ENST00000534204 UPF1Q92900 1129 aaKnown RBP eCLIP19.99■□□□□ 0.79
KNL1-212ENST00000534204 CFAP65Q6ZU64 1925 aaKnown RBP19.99■□□□□ 0.79
KNL1-212ENST00000534204 PHLPP1O60346 1717 aa19.98■□□□□ 0.79
KNL1-212ENST00000534204 CCDC141Q6ZP82 1450 aa19.97■□□□□ 0.79
KNL1-212ENST00000534204 COL16A1Q07092 1604 aaPredicted RBP19.96■□□□□ 0.79
KNL1-212ENST00000534204 LTKP29376 864 aa19.96■□□□□ 0.79
KNL1-212ENST00000534204 LRP6O75581 1613 aa19.95■□□□□ 0.78
KNL1-212ENST00000534204 CAMSAP2Q08AD1 1489 aa19.94■□□□□ 0.78
KNL1-212ENST00000534204 TMEM94Q12767 1356 aa19.93■□□□□ 0.78
KNL1-212ENST00000534204 EIF2AK4Q9P2K8 1649 aaKnown RBP19.92■□□□□ 0.78
KNL1-212ENST00000534204 EHBP1L1Q8N3D4 1523 aa19.92■□□□□ 0.78
KNL1-212ENST00000534204 NWD1Q149M9 1564 aa19.91■□□□□ 0.78
KNL1-212ENST00000534204 LRRC9Q6ZRR7 1453 aa19.91■□□□□ 0.78
KNL1-212ENST00000534204 ARHGEF5Q12774 1597 aa19.91■□□□□ 0.78
KNL1-212ENST00000534204 PIK3C2BO00750 1634 aa19.91■□□□□ 0.78
KNL1-212ENST00000534204 TET3O43151 1660 aa19.89■□□□□ 0.77
KNL1-212ENST00000534204 SRCAPQ6ZRS2 3230 aa19.88■□□□□ 0.77
KNL1-212ENST00000534204 PRDM15P57071 1507 aaPredicted RBP19.87■□□□□ 0.77
KNL1-212ENST00000534204 CEP162Q5TB80 1403 aa19.87■□□□□ 0.77
KNL1-212ENST00000534204 MTUS2Q5JR59 1369 aa19.87■□□□□ 0.77
KNL1-212ENST00000534204 KDM5AP29375 1690 aaKnown RBP19.86■□□□□ 0.77
KNL1-212ENST00000534204 MAST1Q9Y2H9 1570 aa19.86■□□□□ 0.77
KNL1-212ENST00000534204 JCADQ9P266 1359 aa19.85■□□□□ 0.77
KNL1-212ENST00000534204 SHPRHQ149N8 1683 aa19.84■□□□□ 0.77
KNL1-212ENST00000534204 TXNDC2Q86VQ3 553 aa19.84■□□□□ 0.77
KNL1-212ENST00000534204 NKTRP30414 1462 aaKnown RBP19.83■□□□□ 0.76
KNL1-212ENST00000534204 RBM33Q96EV2 1170 aaKnown RBP19.81■□□□□ 0.76
KNL1-212ENST00000534204 TMEM2Q9UHN6 1383 aa19.8■□□□□ 0.76
KNL1-212ENST00000534204 CDK12Q9NYV4 1490 aaPredicted RBP19.79■□□□□ 0.76
KNL1-212ENST00000534204 TRIM52Q96A61 297 aa19.79■□□□□ 0.76
KNL1-212ENST00000534204 ARHGAP31Q2M1Z3 1444 aa19.78■□□□□ 0.76
KNL1-212ENST00000534204 KCNA6P17658 529 aa19.78■□□□□ 0.76
KNL1-212ENST00000534204 CHD2O14647 1828 aaKnown RBP19.78■□□□□ 0.76
KNL1-212ENST00000534204 AHDC1Q5TGY3 1603 aaPredicted RBP19.77■□□□□ 0.76
KNL1-212ENST00000534204 DIP2AQ14689 1571 aa19.77■□□□□ 0.76
KNL1-212ENST00000534204 FGD6Q6ZV73 1430 aa19.76■□□□□ 0.75
KNL1-212ENST00000534204 EFCAB6Q5THR3 1501 aa19.75■□□□□ 0.75
KNL1-212ENST00000534204 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
KNL1-212ENST00000534204 SPATA31A6Q5VVP1 1343 aa19.73■□□□□ 0.75
KNL1-212ENST00000534204 ZNF772Q68DY9 489 aaPredicted RBP19.72■□□□□ 0.75
KNL1-212ENST00000534204 PROSER2Q86WR7 435 aaPredicted RBP19.72■□□□□ 0.75
KNL1-212ENST00000534204 SLAIN2Q9P270 581 aa19.72■□□□□ 0.75
KNL1-212ENST00000534204 MSH6P52701 1360 aa19.7■□□□□ 0.74
KNL1-212ENST00000534204 EID1Q9Y6B2 187 aa19.7■□□□□ 0.74
KNL1-212ENST00000534204 RGS12O14924 1447 aa19.69■□□□□ 0.74
KNL1-212ENST00000534204 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.69■□□□□ 0.74
KNL1-212ENST00000534204 SLC26A8Q96RN1 970 aa19.69■□□□□ 0.74
KNL1-212ENST00000534204 MYO5BQ9ULV0 1848 aa19.67■□□□□ 0.74
KNL1-212ENST00000534204 ADGRB3O60242 1522 aa19.67■□□□□ 0.74
KNL1-212ENST00000534204 DUOX2Q9NRD8 1548 aa19.67■□□□□ 0.74
KNL1-212ENST00000534204 RXRBP28702 533 aa19.65■□□□□ 0.74
KNL1-212ENST00000534204 SETBP1Q9Y6X0 1596 aa19.63■□□□□ 0.73
KNL1-212ENST00000534204 CROCC2H7BZ55 1655 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms