RNA–Protein interactions for RNA: ENST00000534204.1

KNL1-212, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-212ENST00000534204 NISCHQ9Y2I1 1504 aa31.89■■■□□ 2.7
KNL1-212ENST00000534204 ABCC9O60706 1549 aa29.73■■■□□ 2.35
KNL1-212ENST00000534204 CCDC180Q9P1Z9 1646 aa29.07■■■□□ 2.24
KNL1-212ENST00000534204 DNAJC5BQ9UF47 199 aa28.71■■■□□ 2.19
KNL1-212ENST00000534204 RB1CC1Q8TDY2 1594 aa27.94■■■□□ 2.06
KNL1-212ENST00000534204 NACADO15069 1562 aa27.57■■■□□ 2
KNL1-212ENST00000534204 UNC13AQ9UPW8 1703 aa27.57■■■□□ 2
KNL1-212ENST00000534204 PABPN1Q86U42 306 aaKnown RBP eCLIP27.46■■□□□ 1.99
KNL1-212ENST00000534204 BICRAQ9NZM4 1560 aa27.35■■□□□ 1.97
KNL1-212ENST00000534204 MYO15BQ96JP2 1530 aa26.96■■□□□ 1.91
KNL1-212ENST00000534204 DCAF8L2P0C7V8 631 aa26.92■■□□□ 1.9
KNL1-212ENST00000534204 CC2D2AQ9P2K1 1620 aa26.91■■□□□ 1.9
KNL1-212ENST00000534204 CECR2Q9BXF3 1484 aa26.87■■□□□ 1.89
KNL1-212ENST00000534204 DNAJC5Q9H3Z4 198 aa26.86■■□□□ 1.89
KNL1-212ENST00000534204 SHROOM4Q9ULL8 1493 aa26.74■■□□□ 1.87
KNL1-212ENST00000534204 EIF4G1Q04637 1599 aaKnown RBP26.64■■□□□ 1.86
KNL1-212ENST00000534204 SCRIBQ14160 1630 aa26.36■■□□□ 1.81
KNL1-212ENST00000534204 DCAF1Q9Y4B6 1507 aa26.31■■□□□ 1.8
KNL1-212ENST00000534204 ZCCHC6Q5VYS8 1495 aaKnown RBP26.3■■□□□ 1.8
KNL1-212ENST00000534204 CUX2O14529 1486 aa25.98■■□□□ 1.75
KNL1-212ENST00000534204 ERCC6Q03468 1493 aa25.62■■□□□ 1.69
KNL1-212ENST00000534204 NCAPD3P42695 1498 aa25.47■■□□□ 1.67
KNL1-212ENST00000534204 THOC2Q8NI27 1593 aaKnown RBP25.39■■□□□ 1.65
KNL1-212ENST00000534204 NESP48681 1621 aa25.38■■□□□ 1.65
KNL1-212ENST00000534204 ATAD2BQ9ULI0 1458 aa25.28■■□□□ 1.64
KNL1-212ENST00000534204 HMGXB3Q12766 1538 aa25.25■■□□□ 1.63
KNL1-212ENST00000534204 TRIM41Q8WV44 630 aa25.2■■□□□ 1.62
KNL1-212ENST00000534204 SMARCA2P51531 1590 aa25.12■■□□□ 1.61
KNL1-212ENST00000534204 KIF21AQ7Z4S6 1674 aa25.11■■□□□ 1.61
KNL1-212ENST00000534204 SMARCA4P51532 1647 aa25.11■■□□□ 1.61
KNL1-212ENST00000534204 LAMC3Q9Y6N6 1575 aa25.04■■□□□ 1.6
KNL1-212ENST00000534204 BAZ1BQ9UIG0 1483 aaKnown RBP24.92■■□□□ 1.58
KNL1-212ENST00000534204 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
KNL1-212ENST00000534204 BAZ1AQ9NRL2 1556 aaPredicted RBP24.8■■□□□ 1.56
KNL1-212ENST00000534204 PDS5BQ9NTI5 1447 aa24.78■■□□□ 1.56
KNL1-212ENST00000534204 WDR62O43379 1518 aa24.78■■□□□ 1.56
KNL1-212ENST00000534204 MRC2Q9UBG0 1479 aa24.72■■□□□ 1.55
KNL1-212ENST00000534204 MROH2BQ7Z745 1585 aa24.59■■□□□ 1.53
KNL1-212ENST00000534204 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
KNL1-212ENST00000534204 RIMBP3CA6NJZ7 1639 aa24.51■■□□□ 1.51
KNL1-212ENST00000534204 RIMBP3BA6NNM3 1639 aa24.51■■□□□ 1.51
KNL1-212ENST00000534204 RIMBP3Q9UFD9 1639 aa24.51■■□□□ 1.51
KNL1-212ENST00000534204 OSCARQ8IYS5 282 aa24.48■■□□□ 1.51
KNL1-212ENST00000534204 CEP164Q9UPV0 1460 aa24.42■■□□□ 1.5
KNL1-212ENST00000534204 FANCD2Q9BXW9 1451 aa24.33■■□□□ 1.49
KNL1-212ENST00000534204 ARHGEF11O15085 1522 aa24.3■■□□□ 1.48
KNL1-212ENST00000534204 WIZO95785 1651 aa24.28■■□□□ 1.48
KNL1-212ENST00000534204 URB2Q14146 1524 aaKnown RBP24.28■■□□□ 1.48
KNL1-212ENST00000534204 CFTRP13569 1480 aa24.19■■□□□ 1.46
KNL1-212ENST00000534204 ZNF608Q9ULD9 1512 aaPredicted RBP24.1■■□□□ 1.45
KNL1-212ENST00000534204 AEBP2Q6ZN18 517 aaPredicted RBP24.08■■□□□ 1.45
KNL1-212ENST00000534204 PRDM2Q13029 1718 aa24.04■■□□□ 1.44
KNL1-212ENST00000534204 ARAP1Q96P48 1450 aa24.03■■□□□ 1.44
KNL1-212ENST00000534204 CHD1O14646 1710 aa23.98■■□□□ 1.43
KNL1-212ENST00000534204 CYB5RLQ6IPT4 315 aa23.97■■□□□ 1.43
KNL1-212ENST00000534204 EIF4G3O43432 1585 aaKnown RBP23.96■■□□□ 1.43
KNL1-212ENST00000534204 IFT140Q96RY7 1462 aa23.96■■□□□ 1.43
KNL1-212ENST00000534204 TRHP20396 242 aaPredicted RBP23.89■■□□□ 1.41
KNL1-212ENST00000534204 TOP2AP11388 1531 aaKnown RBP23.87■■□□□ 1.41
KNL1-212ENST00000534204 TOPBP1Q92547 1522 aa23.83■■□□□ 1.41
KNL1-212ENST00000534204 RSF1Q96T23 1441 aaPredicted RBP23.81■■□□□ 1.4
KNL1-212ENST00000534204 TARBP1Q13395 1621 aaKnown RBP23.77■■□□□ 1.4
KNL1-212ENST00000534204 AQRO60306 1485 aaKnown RBP eCLIP23.7■■□□□ 1.381e-6■■■■□ 22.4
KNL1-212ENST00000534204 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
KNL1-212ENST00000534204 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
KNL1-212ENST00000534204 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
KNL1-212ENST00000534204 CCDC88BA6NC98 1476 aa23.57■■□□□ 1.36
KNL1-212ENST00000534204 POLA1P09884 1462 aaPredicted RBP23.54■■□□□ 1.36
KNL1-212ENST00000534204 FBLN2P98095 1184 aa23.49■■□□□ 1.35
KNL1-212ENST00000534204 SNAPC4Q5SXM2 1469 aa23.46■■□□□ 1.35
KNL1-212ENST00000534204 SYNJ1O43426 1573 aa23.44■■□□□ 1.34
KNL1-212ENST00000534204 RAD54L2Q9Y4B4 1467 aa23.44■■□□□ 1.34
KNL1-212ENST00000534204 WDR97A6NE52 1622 aa23.39■■□□□ 1.33
KNL1-212ENST00000534204 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
KNL1-212ENST00000534204 GAPVD1Q14C86 1478 aa23.35■■□□□ 1.33
KNL1-212ENST00000534204 MAGI1Q96QZ7 1491 aaPredicted RBP23.35■■□□□ 1.33
KNL1-212ENST00000534204 SOGA1O94964 1423 aa23.3■■□□□ 1.32
KNL1-212ENST00000534204 SYNJ2O15056 1496 aa23.28■■□□□ 1.32
KNL1-212ENST00000534204 ERCC6L2Q5T890 1561 aa23.27■■□□□ 1.32
KNL1-212ENST00000534204 KIF13AQ9H1H9 1805 aa23.26■■□□□ 1.31
KNL1-212ENST00000534204 FGD5Q6ZNL6 1462 aa23.25■■□□□ 1.31
KNL1-212ENST00000534204 PBRM1Q86U86 1689 aa23.24■■□□□ 1.31
KNL1-212ENST00000534204 GRIN2BQ13224 1484 aa23.23■■□□□ 1.31
KNL1-212ENST00000534204 CHMP7Q8WUX9 453 aaPredicted RBP23.21■■□□□ 1.31
KNL1-212ENST00000534204 CUX1P39880 1505 aa23.16■■□□□ 1.3
KNL1-212ENST00000534204 ABCA5Q8WWZ7 1642 aa23.09■■□□□ 1.29
KNL1-212ENST00000534204 CEP170Q5SW79 1584 aa23.07■■□□□ 1.28
KNL1-212ENST00000534204 SHROOM2Q13796 1616 aa23.06■■□□□ 1.28
KNL1-212ENST00000534204 ILDR1Q86SU0 546 aaPredicted RBP23.03■■□□□ 1.28
KNL1-212ENST00000534204 GRIN2AQ12879 1464 aa22.98■■□□□ 1.27
KNL1-212ENST00000534204 NUP160Q12769 1436 aa22.97■■□□□ 1.27
KNL1-212ENST00000534204 ABCA10Q8WWZ4 1543 aa22.95■■□□□ 1.26
KNL1-212ENST00000534204 ADAMTS12P58397 1594 aa22.94■■□□□ 1.26
KNL1-212ENST00000534204 KDM4FA0A1W2PPD8 638 aa22.93■■□□□ 1.26
KNL1-212ENST00000534204 DIP2BQ9P265 1576 aa22.86■■□□□ 1.25
KNL1-212ENST00000534204 ABCC10Q5T3U5 1492 aa22.85■■□□□ 1.25
KNL1-212ENST00000534204 KDM6BO15054 1643 aa22.8■■□□□ 1.24
KNL1-212ENST00000534204 MAPKBP1O60336 1514 aa22.8■■□□□ 1.24
KNL1-212ENST00000534204 ADCY10Q96PN6 1610 aa22.73■■□□□ 1.23
KNL1-212ENST00000534204 CHIC1Q5VXU3 224 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms