RNA–Protein interactions for RNA: ENST00000534176.1

UBXN1-217, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 943 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-217ENST00000534176 KDM5DQ9BY66 1539 aa23.86■■□□□ 1.41
UBXN1-217ENST00000534176 ERBINQ96RT1 1412 aa23.83■■□□□ 1.4
UBXN1-217ENST00000534176 WASHC2CQ9Y4E1 1318 aa23.83■■□□□ 1.4
UBXN1-217ENST00000534176 ANKRD30AQ9BXX3 1397 aa23.82■■□□□ 1.4
UBXN1-217ENST00000534176 RNF17Q9BXT8 1623 aaKnown RBP23.82■■□□□ 1.4
UBXN1-217ENST00000534176 DMRT2Q9Y5R5 561 aa23.82■■□□□ 1.4
UBXN1-217ENST00000534176 KIF15Q9NS87 1388 aa23.81■■□□□ 1.4
UBXN1-217ENST00000534176 ZC3H13Q5T200 1668 aaKnown RBP23.79■■□□□ 1.4
UBXN1-217ENST00000534176 PTPRKQ15262 1439 aa23.78■■□□□ 1.4
UBXN1-217ENST00000534176 HSPA2P54652 639 aa23.78■■□□□ 1.4
UBXN1-217ENST00000534176 PZPP20742 1482 aa23.76■■□□□ 1.39
UBXN1-217ENST00000534176 FAM50AQ14320 339 aaKnown RBP23.76■■□□□ 1.39
UBXN1-217ENST00000534176 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.75■■□□□ 1.39
UBXN1-217ENST00000534176 ADGRL2O95490 1459 aa23.75■■□□□ 1.39
UBXN1-217ENST00000534176 NCOA1Q15788 1441 aa23.74■■□□□ 1.39
UBXN1-217ENST00000534176 RRP7BPQ9NSQ0 103 aa23.73■■□□□ 1.39
UBXN1-217ENST00000534176 ZNF142P52746 1687 aaPredicted RBP23.71■■□□□ 1.39
UBXN1-217ENST00000534176 PRDM15P57071 1507 aaPredicted RBP23.7■■□□□ 1.38
UBXN1-217ENST00000534176 KANK1Q14678 1352 aa23.7■■□□□ 1.38
UBXN1-217ENST00000534176 MYO3AQ8NEV4 1616 aa23.7■■□□□ 1.38
UBXN1-217ENST00000534176 ABCC3O15438 1527 aa23.69■■□□□ 1.38
UBXN1-217ENST00000534176 CEP170BQ9Y4F5 1589 aaPredicted RBP23.68■■□□□ 1.38
UBXN1-217ENST00000534176 TNRQ92752 1358 aa23.67■■□□□ 1.38
UBXN1-217ENST00000534176 DEPDC5O75140 1603 aa23.66■■□□□ 1.38
UBXN1-217ENST00000534176 CHIC2Q9UKJ5 165 aa23.66■■□□□ 1.38
UBXN1-217ENST00000534176 A2ML1A8K2U0 1454 aa23.66■■□□□ 1.38
UBXN1-217ENST00000534176 PLA2R1Q13018 1463 aa23.66■■□□□ 1.38
UBXN1-217ENST00000534176 NLRP1Q9C000 1473 aa23.66■■□□□ 1.38
UBXN1-217ENST00000534176 MROH1Q8NDA8 1641 aa23.66■■□□□ 1.38
UBXN1-217ENST00000534176 ROCK1Q13464 1354 aa23.65■■□□□ 1.38
UBXN1-217ENST00000534176 PTPRTO14522 1441 aa23.65■■□□□ 1.38
UBXN1-217ENST00000534176 ARHGAP31Q2M1Z3 1444 aa23.64■■□□□ 1.37
UBXN1-217ENST00000534176 PKD2Q13563 968 aa23.63■■□□□ 1.37
UBXN1-217ENST00000534176 STRCQ7RTU9 1775 aa23.62■■□□□ 1.37
UBXN1-217ENST00000534176 CAMSAP1Q5T5Y3 1602 aa23.62■■□□□ 1.37
UBXN1-217ENST00000534176 ANKRD50Q9ULJ7 1429 aa23.61■■□□□ 1.37
UBXN1-217ENST00000534176 SPATA31D1Q6ZQQ2 1576 aa23.6■■□□□ 1.37
UBXN1-217ENST00000534176 LMTK2Q8IWU2 1503 aa23.59■■□□□ 1.37
UBXN1-217ENST00000534176 FBXO31Q5XUX0 539 aaPredicted RBP23.58■■□□□ 1.37
UBXN1-217ENST00000534176 THEMISQ8N1K5 641 aaPredicted RBP23.57■■□□□ 1.36
UBXN1-217ENST00000534176 ERVK-7P63135 1459 aa23.56■■□□□ 1.36
UBXN1-217ENST00000534176 CEP152O94986 1710 aa23.56■■□□□ 1.36
UBXN1-217ENST00000534176 VWDEQ8N2E2 1590 aa23.56■■□□□ 1.36
UBXN1-217ENST00000534176 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.55■■□□□ 1.36
UBXN1-217ENST00000534176 RRBP1Q9P2E9 1410 aaKnown RBP23.55■■□□□ 1.36
UBXN1-217ENST00000534176 UGGT1Q9NYU2 1555 aa23.52■■□□□ 1.36
UBXN1-217ENST00000534176 RPRD2Q5VT52 1461 aaKnown RBP23.5■■□□□ 1.35
UBXN1-217ENST00000534176 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
UBXN1-217ENST00000534176 FBXO41Q8TF61 875 aa23.49■■□□□ 1.35
UBXN1-217ENST00000534176 ANKLE2Q86XL3 938 aa23.47■■□□□ 1.35
UBXN1-217ENST00000534176 EFCAB6Q5THR3 1501 aa23.47■■□□□ 1.35
UBXN1-217ENST00000534176 UNC13BO14795 1591 aa23.45■■□□□ 1.34
UBXN1-217ENST00000534176 CERKQ8TCT0 537 aa23.45■■□□□ 1.34
UBXN1-217ENST00000534176 NCKAP5LQ9HCH0 1330 aa23.44■■□□□ 1.34
UBXN1-217ENST00000534176 POLR1AO95602 1720 aaPredicted RBP23.44■■□□□ 1.34
UBXN1-217ENST00000534176 ITGAEP38570 1179 aa23.43■■□□□ 1.34
UBXN1-217ENST00000534176 ILDR1Q86SU0 546 aaPredicted RBP23.43■■□□□ 1.34
UBXN1-217ENST00000534176 TET3O43151 1660 aa23.42■■□□□ 1.34
UBXN1-217ENST00000534176 KDM5AP29375 1690 aaKnown RBP23.42■■□□□ 1.34
UBXN1-217ENST00000534176 SLC52A1Q9NWF4 448 aa23.42■■□□□ 1.34
UBXN1-217ENST00000534176 IQSEC2Q5JU85 1478 aa23.41■■□□□ 1.34
UBXN1-217ENST00000534176 MED14O60244 1454 aa23.4■■□□□ 1.34
UBXN1-217ENST00000534176 NOS1P29475 1434 aa23.39■■□□□ 1.33
UBXN1-217ENST00000534176 GCC2Q8IWJ2 1684 aa23.38■■□□□ 1.33
UBXN1-217ENST00000534176 CFAP65Q6ZU64 1925 aaKnown RBP23.38■■□□□ 1.33
UBXN1-217ENST00000534176 IQGAP3Q86VI3 1631 aa23.37■■□□□ 1.33
UBXN1-217ENST00000534176 UBR1Q8IWV7 1749 aa23.37■■□□□ 1.33
UBXN1-217ENST00000534176 STAG3Q9UJ98 1225 aa23.36■■□□□ 1.33
UBXN1-217ENST00000534176 SLIT1O75093 1534 aa23.34■■□□□ 1.33
UBXN1-217ENST00000534176 EID1Q9Y6B2 187 aa23.34■■□□□ 1.33
UBXN1-217ENST00000534176 NUP155O75694 1391 aa23.34■■□□□ 1.33
UBXN1-217ENST00000534176 NEURL4Q96JN8 1562 aa23.34■■□□□ 1.33
UBXN1-217ENST00000534176 NPHP4O75161 1426 aaPredicted RBP23.33■■□□□ 1.33
UBXN1-217ENST00000534176 LTBP4Q8N2S1 1624 aa23.33■■□□□ 1.33
UBXN1-217ENST00000534176 ARHGAP23Q9P227 1491 aa23.32■■□□□ 1.32
UBXN1-217ENST00000534176 ACIN1Q9UKV3 1341 aaKnown RBP23.32■■□□□ 1.32
UBXN1-217ENST00000534176 HFM1A2PYH4 1435 aa23.31■■□□□ 1.32
UBXN1-217ENST00000534176 SCAF11Q99590 1463 aaKnown RBP23.3■■□□□ 1.32
UBXN1-217ENST00000534176 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
UBXN1-217ENST00000534176 IDI1Q13907 227 aa23.3■■□□□ 1.32
UBXN1-217ENST00000534176 SYNMO15061 1565 aa23.3■■□□□ 1.32
UBXN1-217ENST00000534176 NAIPQ13075 1403 aa23.29■■□□□ 1.32
UBXN1-217ENST00000534176 IQGAP1P46940 1657 aa23.28■■□□□ 1.32
UBXN1-217ENST00000534176 TMEM2Q9UHN6 1383 aa23.28■■□□□ 1.32
UBXN1-217ENST00000534176 HDGFP51858 240 aaKnown RBP23.28■■□□□ 1.32
UBXN1-217ENST00000534176 ADGRB3O60242 1522 aa23.28■■□□□ 1.32
UBXN1-217ENST00000534176 CPS1P31327 1500 aa23.28■■□□□ 1.32
UBXN1-217ENST00000534176 TXNDC2Q86VQ3 553 aa23.26■■□□□ 1.31
UBXN1-217ENST00000534176 ZNF335Q9H4Z2 1342 aaPredicted RBP23.26■■□□□ 1.31
UBXN1-217ENST00000534176 E9PCH4 1651 aa23.25■■□□□ 1.31
UBXN1-217ENST00000534176 LTKP29376 864 aa23.18■■□□□ 1.3
UBXN1-217ENST00000534176 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.18■■□□□ 1.3
UBXN1-217ENST00000534176 TMEM131LA2VDJ0 1609 aa23.15■■□□□ 1.3
UBXN1-217ENST00000534176 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
UBXN1-217ENST00000534176 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
UBXN1-217ENST00000534176 ZFYVE9O95405 1425 aa23.11■■□□□ 1.29
UBXN1-217ENST00000534176 RIMS2Q9UQ26 1411 aa23.1■■□□□ 1.29
UBXN1-217ENST00000534176 PPP1R15AO75807 674 aaPredicted RBP23.1■■□□□ 1.29
UBXN1-217ENST00000534176 PLEKHG1Q9ULL1 1385 aa23.1■■□□□ 1.29
UBXN1-217ENST00000534176 TRPM2O94759 1503 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms