RNA–Protein interactions for RNA: ENST00000533604.1

CAPN11-205, Transcript of calpain 11, humanhuman

TSL 2

Gene CAPN11, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-205ENST00000533604 HFM1A2PYH4 1435 aa12.25□□□□□ -0.45
CAPN11-205ENST00000533604 NCOA1Q15788 1441 aa12.25□□□□□ -0.45
CAPN11-205ENST00000533604 TRAPPC8Q9Y2L5 1435 aa12.25□□□□□ -0.45
CAPN11-205ENST00000533604 SYCP2Q9BX26 1530 aa12.25□□□□□ -0.45
CAPN11-205ENST00000533604 ARHGEF12Q9NZN5 1544 aa12.25□□□□□ -0.45
CAPN11-205ENST00000533604 TRIM52Q96A61 297 aa12.24□□□□□ -0.45
CAPN11-205ENST00000533604 CFAP74Q9C0B2 1584 aa12.23□□□□□ -0.45
CAPN11-205ENST00000533604 ABCC1P33527 1531 aa12.23□□□□□ -0.45
CAPN11-205ENST00000533604 SHANK2Q9UPX8 1470 aa12.23□□□□□ -0.45
CAPN11-205ENST00000533604 NAIPQ13075 1403 aa12.23□□□□□ -0.45
CAPN11-205ENST00000533604 TOM1O60784 492 aa12.23□□□□□ -0.45
CAPN11-205ENST00000533604 RICTORQ6R327 1708 aa12.23□□□□□ -0.45
CAPN11-205ENST00000533604 DENND4BO75064 1496 aaPredicted RBP12.22□□□□□ -0.45
CAPN11-205ENST00000533604 SETD1AO15047 1707 aaKnown RBP12.22□□□□□ -0.45
CAPN11-205ENST00000533604 RTEL1-TNFRSF6BF6WH68 1400 aa12.21□□□□□ -0.45
CAPN11-205ENST00000533604 ADGRL2O95490 1459 aa12.21□□□□□ -0.46
CAPN11-205ENST00000533604 KIF15Q9NS87 1388 aa12.2□□□□□ -0.46
CAPN11-205ENST00000533604 ZFYVE16Q7Z3T8 1539 aa12.19□□□□□ -0.46
CAPN11-205ENST00000533604 ZNF518AQ6AHZ1 1483 aa12.19□□□□□ -0.46
CAPN11-205ENST00000533604 UPF1Q92900 1129 aaKnown RBP eCLIP12.18□□□□□ -0.46
CAPN11-205ENST00000533604 ANKRD50Q9ULJ7 1429 aa12.18□□□□□ -0.46
CAPN11-205ENST00000533604 ZEB1P37275 1124 aaPredicted RBP12.17□□□□□ -0.46
CAPN11-205ENST00000533604 CAMSAP1Q5T5Y3 1602 aa12.17□□□□□ -0.46
CAPN11-205ENST00000533604 MAST1Q9Y2H9 1570 aa12.17□□□□□ -0.46
CAPN11-205ENST00000533604 CROCC2H7BZ55 1655 aa12.14□□□□□ -0.47
CAPN11-205ENST00000533604 MPHOSPH9Q99550 1183 aa12.14□□□□□ -0.47
CAPN11-205ENST00000533604 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.14□□□□□ -0.47
CAPN11-205ENST00000533604 DHX57Q6P158 1386 aaKnown RBP12.14□□□□□ -0.47
CAPN11-205ENST00000533604 DHX29Q7Z478 1369 aaKnown RBP12.14□□□□□ -0.47
CAPN11-205ENST00000533604 MLH3Q9UHC1 1453 aa12.14□□□□□ -0.47
CAPN11-205ENST00000533604 ADGBQ8N7X0 1667 aa12.13□□□□□ -0.47
CAPN11-205ENST00000533604 DUOX2Q9NRD8 1548 aa12.13□□□□□ -0.47
CAPN11-205ENST00000533604 ALKQ9UM73 1620 aa12.13□□□□□ -0.47
CAPN11-205ENST00000533604 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
CAPN11-205ENST00000533604 ATP7AQ04656 1500 aa12.12□□□□□ -0.47
CAPN11-205ENST00000533604 KIF3BO15066 747 aa12.12□□□□□ -0.47
CAPN11-205ENST00000533604 NUP155O75694 1391 aa12.12□□□□□ -0.47
CAPN11-205ENST00000533604 C3P01024 1663 aa12.12□□□□□ -0.47
CAPN11-205ENST00000533604 CLSPNQ9HAW4 1339 aa12.11□□□□□ -0.47
CAPN11-205ENST00000533604 ZMYM4Q5VZL5 1548 aa12.11□□□□□ -0.47
CAPN11-205ENST00000533604 ERBINQ96RT1 1412 aa12.11□□□□□ -0.47
CAPN11-205ENST00000533604 GCC2Q8IWJ2 1684 aa12.1□□□□□ -0.47
CAPN11-205ENST00000533604 PLXNC1O60486 1568 aa12.09□□□□□ -0.47
CAPN11-205ENST00000533604 ATP10AO60312 1499 aa12.09□□□□□ -0.47
CAPN11-205ENST00000533604 MAGI2Q86UL8 1455 aa12.09□□□□□ -0.47
CAPN11-205ENST00000533604 PPP6R1Q9UPN7 881 aa12.09□□□□□ -0.47
CAPN11-205ENST00000533604 KDM5CP41229 1560 aa12.09□□□□□ -0.47
CAPN11-205ENST00000533604 A2MP01023 1474 aa12.08□□□□□ -0.47
CAPN11-205ENST00000533604 KANK1Q14678 1352 aa12.07□□□□□ -0.48
CAPN11-205ENST00000533604 GGT6Q6P531 493 aa12.07□□□□□ -0.48
CAPN11-205ENST00000533604 INO80Q9ULG1 1556 aaPredicted RBP12.07□□□□□ -0.48
CAPN11-205ENST00000533604 PKD2Q13563 968 aa12.06□□□□□ -0.48
CAPN11-205ENST00000533604 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
CAPN11-205ENST00000533604 KIDINS220Q9ULH0 1771 aa12.05□□□□□ -0.48
CAPN11-205ENST00000533604 FOXD1Q16676 465 aa12.04□□□□□ -0.48
CAPN11-205ENST00000533604 SIN3AQ96ST3 1273 aa12.02□□□□□ -0.49
CAPN11-205ENST00000533604 WASHC2CQ9Y4E1 1318 aa12.02□□□□□ -0.49
CAPN11-205ENST00000533604 ESF1Q9H501 851 aaKnown RBP12.01□□□□□ -0.49
CAPN11-205ENST00000533604 PZPP20742 1482 aa12.01□□□□□ -0.49
CAPN11-205ENST00000533604 DIP2CQ9Y2E4 1556 aa12□□□□□ -0.49
CAPN11-205ENST00000533604 TIMELESSQ9UNS1 1208 aa11.99□□□□□ -0.49
CAPN11-205ENST00000533604 CPS1P31327 1500 aa11.99□□□□□ -0.49
CAPN11-205ENST00000533604 ABCA6Q8N139 1617 aa11.99□□□□□ -0.49
CAPN11-205ENST00000533604 KDM5DQ9BY66 1539 aa11.98□□□□□ -0.49
CAPN11-205ENST00000533604 FAM135AQ9P2D6 1515 aa11.98□□□□□ -0.49
CAPN11-205ENST00000533604 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
CAPN11-205ENST00000533604 ANKRD30BQ9BXX2 1392 aa11.97□□□□□ -0.49
CAPN11-205ENST00000533604 UNC13BO14795 1591 aa11.96□□□□□ -0.49
CAPN11-205ENST00000533604 PLA2R1Q13018 1463 aa11.95□□□□□ -0.5
CAPN11-205ENST00000533604 TONSLQ96HA7 1378 aa11.94□□□□□ -0.5
CAPN11-205ENST00000533604 AGLP35573 1532 aa11.94□□□□□ -0.5
CAPN11-205ENST00000533604 REREQ9P2R6 1566 aa11.93□□□□□ -0.5
CAPN11-205ENST00000533604 IFFO2Q5TF58 517 aa11.92□□□□□ -0.5
CAPN11-205ENST00000533604 IQGAP3Q86VI3 1631 aa11.92□□□□□ -0.5
CAPN11-205ENST00000533604 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
CAPN11-205ENST00000533604 NPATQ14207 1427 aa11.91□□□□□ -0.5
CAPN11-205ENST00000533604 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
CAPN11-205ENST00000533604 DEPDC5O75140 1603 aa11.9□□□□□ -0.5
CAPN11-205ENST00000533604 RNF17Q9BXT8 1623 aaKnown RBP11.9□□□□□ -0.5
CAPN11-205ENST00000533604 VWDEQ8N2E2 1590 aa11.9□□□□□ -0.5
CAPN11-205ENST00000533604 LMTK2Q8IWU2 1503 aa11.9□□□□□ -0.5
CAPN11-205ENST00000533604 CCDC144AA2RUR9 1427 aa11.89□□□□□ -0.51
CAPN11-205ENST00000533604 CEP170BQ9Y4F5 1589 aaPredicted RBP11.88□□□□□ -0.51
CAPN11-205ENST00000533604 SETBP1Q9Y6X0 1596 aa11.88□□□□□ -0.51
CAPN11-205ENST00000533604 PPP1R15AO75807 674 aaPredicted RBP11.88□□□□□ -0.51
CAPN11-205ENST00000533604 L3MBTL2Q969R5 705 aa11.88□□□□□ -0.51
CAPN11-205ENST00000533604 MROH1Q8NDA8 1641 aa11.88□□□□□ -0.51
CAPN11-205ENST00000533604 ABCC3O15438 1527 aa11.87□□□□□ -0.51
CAPN11-205ENST00000533604 MYO3AQ8NEV4 1616 aa11.87□□□□□ -0.51
CAPN11-205ENST00000533604 RGL3Q3MIN7 710 aa11.87□□□□□ -0.51
CAPN11-205ENST00000533604 RBM33Q96EV2 1170 aaKnown RBP11.87□□□□□ -0.51
CAPN11-205ENST00000533604 NEURL4Q96JN8 1562 aa11.87□□□□□ -0.51
CAPN11-205ENST00000533604 LRRC7Q96NW7 1537 aa11.86□□□□□ -0.51
CAPN11-205ENST00000533604 CHGAP10645 457 aaKnown RBP11.86□□□□□ -0.51
CAPN11-205ENST00000533604 RPRD2Q5VT52 1461 aaKnown RBP11.86□□□□□ -0.51
CAPN11-205ENST00000533604 TET3O43151 1660 aa11.86□□□□□ -0.51
CAPN11-205ENST00000533604 ZNF142P52746 1687 aaPredicted RBP11.86□□□□□ -0.51
CAPN11-205ENST00000533604 ARHGAP31Q2M1Z3 1444 aa11.86□□□□□ -0.51
CAPN11-205ENST00000533604 CNTLNQ9NXG0 1405 aa11.86□□□□□ -0.51
CAPN11-205ENST00000533604 STRCP1A6NGW2 1772 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms