RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 DNMT1P26358 1616 aaKnown RBP18.85■□□□□ 0.61
SF3B2-213ENST00000533421 DUOX2Q9NRD8 1548 aa18.84■□□□□ 0.61
SF3B2-213ENST00000533421 WASHC2CQ9Y4E1 1318 aa18.84■□□□□ 0.61
SF3B2-213ENST00000533421 DAPK1P53355 1430 aa18.83■□□□□ 0.61
SF3B2-213ENST00000533421 DMRT2Q9Y5R5 561 aa18.83■□□□□ 0.6
SF3B2-213ENST00000533421 FBXO41Q8TF61 875 aa18.82■□□□□ 0.6
SF3B2-213ENST00000533421 ABCC5O15440 1437 aa18.82■□□□□ 0.6
SF3B2-213ENST00000533421 RNF17Q9BXT8 1623 aaKnown RBP18.81■□□□□ 0.6
SF3B2-213ENST00000533421 ANKRD30AQ9BXX3 1397 aa18.81■□□□□ 0.6
SF3B2-213ENST00000533421 KIF15Q9NS87 1388 aa18.81■□□□□ 0.6
SF3B2-213ENST00000533421 ZC3H13Q5T200 1668 aaKnown RBP18.8■□□□□ 0.6
SF3B2-213ENST00000533421 PTPRKQ15262 1439 aa18.8■□□□□ 0.6
SF3B2-213ENST00000533421 ERBINQ96RT1 1412 aa18.8■□□□□ 0.6
SF3B2-213ENST00000533421 FAM50AQ14320 339 aaKnown RBP18.79■□□□□ 0.6
SF3B2-213ENST00000533421 PZPP20742 1482 aa18.77■□□□□ 0.6
SF3B2-213ENST00000533421 MYO3AQ8NEV4 1616 aa18.76■□□□□ 0.59
SF3B2-213ENST00000533421 RRP7BPQ9NSQ0 103 aa18.76■□□□□ 0.59
SF3B2-213ENST00000533421 ZNF142P52746 1687 aaPredicted RBP18.76■□□□□ 0.59
SF3B2-213ENST00000533421 CEP170BQ9Y4F5 1589 aaPredicted RBP18.73■□□□□ 0.59
SF3B2-213ENST00000533421 KANK1Q14678 1352 aa18.73■□□□□ 0.59
SF3B2-213ENST00000533421 TNRQ92752 1358 aa18.72■□□□□ 0.59
SF3B2-213ENST00000533421 CHIC2Q9UKJ5 165 aa18.72■□□□□ 0.59
SF3B2-213ENST00000533421 ADGRL2O95490 1459 aa18.71■□□□□ 0.59
SF3B2-213ENST00000533421 ABCC3O15438 1527 aa18.71■□□□□ 0.59
SF3B2-213ENST00000533421 NCOA1Q15788 1441 aa18.71■□□□□ 0.59
SF3B2-213ENST00000533421 A2ML1A8K2U0 1454 aa18.71■□□□□ 0.59
SF3B2-213ENST00000533421 CAMSAP1Q5T5Y3 1602 aa18.71■□□□□ 0.58
SF3B2-213ENST00000533421 STRCQ7RTU9 1775 aa18.7■□□□□ 0.58
SF3B2-213ENST00000533421 PRDM15P57071 1507 aaPredicted RBP18.7■□□□□ 0.58
SF3B2-213ENST00000533421 PTPRTO14522 1441 aa18.7■□□□□ 0.58
SF3B2-213ENST00000533421 PLA2R1Q13018 1463 aa18.7■□□□□ 0.58
SF3B2-213ENST00000533421 MROH1Q8NDA8 1641 aa18.68■□□□□ 0.58
SF3B2-213ENST00000533421 PKD2Q13563 968 aa18.68■□□□□ 0.58
SF3B2-213ENST00000533421 NLRP1Q9C000 1473 aa18.68■□□□□ 0.58
SF3B2-213ENST00000533421 DEPDC5O75140 1603 aa18.67■□□□□ 0.58
SF3B2-213ENST00000533421 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.67■□□□□ 0.58
SF3B2-213ENST00000533421 CEP152O94986 1710 aa18.66■□□□□ 0.58
SF3B2-213ENST00000533421 FBXO31Q5XUX0 539 aaPredicted RBP18.66■□□□□ 0.58
SF3B2-213ENST00000533421 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.65■□□□□ 0.584e-13■■□□□ 14.2
SF3B2-213ENST00000533421 ARHGAP31Q2M1Z3 1444 aa18.64■□□□□ 0.57
SF3B2-213ENST00000533421 SPATA31D1Q6ZQQ2 1576 aa18.64■□□□□ 0.57
SF3B2-213ENST00000533421 ANKRD50Q9ULJ7 1429 aa18.63■□□□□ 0.57
SF3B2-213ENST00000533421 THEMISQ8N1K5 641 aaPredicted RBP18.62■□□□□ 0.57
SF3B2-213ENST00000533421 ROCK1Q13464 1354 aa18.62■□□□□ 0.57
SF3B2-213ENST00000533421 ERVK-7P63135 1459 aa18.62■□□□□ 0.57
SF3B2-213ENST00000533421 UGGT1Q9NYU2 1555 aa18.61■□□□□ 0.57
SF3B2-213ENST00000533421 ITGAEP38570 1179 aa18.6■□□□□ 0.57
SF3B2-213ENST00000533421 LMTK2Q8IWU2 1503 aa18.59■□□□□ 0.57
SF3B2-213ENST00000533421 CERKQ8TCT0 537 aa18.59■□□□□ 0.57
SF3B2-213ENST00000533421 NCKAP5LQ9HCH0 1330 aa18.57■□□□□ 0.56
SF3B2-213ENST00000533421 VWDEQ8N2E2 1590 aa18.57■□□□□ 0.56
SF3B2-213ENST00000533421 ANKLE2Q86XL3 938 aa18.57■□□□□ 0.56
SF3B2-213ENST00000533421 POLR1AO95602 1720 aaPredicted RBP18.56■□□□□ 0.56
SF3B2-213ENST00000533421 CFAP65Q6ZU64 1925 aaKnown RBP18.55■□□□□ 0.56
SF3B2-213ENST00000533421 RRBP1Q9P2E9 1410 aaKnown RBP18.54■□□□□ 0.56
SF3B2-213ENST00000533421 EFCAB6Q5THR3 1501 aa18.53■□□□□ 0.56
SF3B2-213ENST00000533421 RPRD2Q5VT52 1461 aaKnown RBP18.52■□□□□ 0.56
SF3B2-213ENST00000533421 STAG3Q9UJ98 1225 aa18.51■□□□□ 0.55
SF3B2-213ENST00000533421 UNC13BO14795 1591 aa18.51■□□□□ 0.55
SF3B2-213ENST00000533421 IQSEC2Q5JU85 1478 aa18.5■□□□□ 0.55
SF3B2-213ENST00000533421 TET3O43151 1660 aa18.5■□□□□ 0.55
SF3B2-213ENST00000533421 UBR1Q8IWV7 1749 aa18.49■□□□□ 0.55
SF3B2-213ENST00000533421 KDM5AP29375 1690 aaKnown RBP18.47■□□□□ 0.55
SF3B2-213ENST00000533421 GCC2Q8IWJ2 1684 aa18.47■□□□□ 0.55
SF3B2-213ENST00000533421 MED14O60244 1454 aa18.47■□□□□ 0.55
SF3B2-213ENST00000533421 SLC52A1Q9NWF4 448 aa18.47■□□□□ 0.55
SF3B2-213ENST00000533421 LTBP4Q8N2S1 1624 aa18.46■□□□□ 0.55
SF3B2-213ENST00000533421 EID1Q9Y6B2 187 aa18.46■□□□□ 0.55
SF3B2-213ENST00000533421 NPHP4O75161 1426 aaPredicted RBP18.46■□□□□ 0.55
SF3B2-213ENST00000533421 NEURL4Q96JN8 1562 aa18.46■□□□□ 0.55
SF3B2-213ENST00000533421 ILDR2Q71H61 639 aa18.45■□□□□ 0.54
SF3B2-213ENST00000533421 NOS1P29475 1434 aa18.45■□□□□ 0.54
SF3B2-213ENST00000533421 PIK3C2BO00750 1634 aa18.44■□□□□ 0.54
SF3B2-213ENST00000533421 IQGAP3Q86VI3 1631 aa18.44■□□□□ 0.54
SF3B2-213ENST00000533421 ZNF335Q9H4Z2 1342 aaPredicted RBP18.44■□□□□ 0.54
SF3B2-213ENST00000533421 IQGAP1P46940 1657 aa18.44■□□□□ 0.54
SF3B2-213ENST00000533421 SLIT1O75093 1534 aa18.44■□□□□ 0.54
SF3B2-213ENST00000533421 NUP155O75694 1391 aa18.43■□□□□ 0.54
SF3B2-213ENST00000533421 SCAF11Q99590 1463 aaKnown RBP18.43■□□□□ 0.54
SF3B2-213ENST00000533421 SYNMO15061 1565 aa18.42■□□□□ 0.54
SF3B2-213ENST00000533421 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
SF3B2-213ENST00000533421 CPS1P31327 1500 aa18.41■□□□□ 0.54
SF3B2-213ENST00000533421 IDI1Q13907 227 aa18.41■□□□□ 0.54
SF3B2-213ENST00000533421 TXNDC2Q86VQ3 553 aa18.4■□□□□ 0.54
SF3B2-213ENST00000533421 ADGRB3O60242 1522 aa18.39■□□□□ 0.54
SF3B2-213ENST00000533421 HDGFP51858 240 aaKnown RBP18.39■□□□□ 0.53
SF3B2-213ENST00000533421 TMEM2Q9UHN6 1383 aa18.39■□□□□ 0.53
SF3B2-213ENST00000533421 E9PCH4 1651 aa18.37■□□□□ 0.53
SF3B2-213ENST00000533421 NAIPQ13075 1403 aa18.36■□□□□ 0.53
SF3B2-213ENST00000533421 HFM1A2PYH4 1435 aa18.35■□□□□ 0.53
SF3B2-213ENST00000533421 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
SF3B2-213ENST00000533421 LTKP29376 864 aa18.32■□□□□ 0.52
SF3B2-213ENST00000533421 ACIN1Q9UKV3 1341 aaKnown RBP18.31■□□□□ 0.52
SF3B2-213ENST00000533421 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.31■□□□□ 0.52
SF3B2-213ENST00000533421 PPP1R15AO75807 674 aaPredicted RBP18.3■□□□□ 0.52
SF3B2-213ENST00000533421 CHGAP10645 457 aaKnown RBP18.3■□□□□ 0.52
SF3B2-213ENST00000533421 UBAP1LF5GYI3 381 aa18.29■□□□□ 0.52
SF3B2-213ENST00000533421 TRIM52Q96A61 297 aa18.29■□□□□ 0.52
SF3B2-213ENST00000533421 SPHKAPQ2M3C7 1700 aa18.29■□□□□ 0.52
SF3B2-213ENST00000533421 TMEM131LA2VDJ0 1609 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 228.8 ms