RNA–Protein interactions for RNA: ENST00000533328.5

SERGEF-223, Transcript of secretion regulating guanine nucleotide exchange factor, human

TSL 5

Gene SERGEF, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SERGEF-223	ENST00000533328	RNF17	Q9BXT8	1623 aa	Known RBP	32.51	■■■□□ 2.8
SERGEF-223	ENST00000533328	ESF1	Q9H501	851 aa	Known RBP	32.51	■■■□□ 2.79
SERGEF-223	ENST00000533328	RRP7BP	Q9NSQ0	103 aa		32.51	■■■□□ 2.79
SERGEF-223	ENST00000533328	RRBP1	Q9P2E9	1410 aa	Known RBP	32.5	■■■□□ 2.79
SERGEF-223	ENST00000533328	ANKRD30A	Q9BXX3	1397 aa		32.49	■■■□□ 2.79
SERGEF-223	ENST00000533328	ZMYM3	Q14202	1370 aa		32.46	■■■□□ 2.79
SERGEF-223	ENST00000533328	ERBIN	Q96RT1	1412 aa		32.46	■■■□□ 2.79
SERGEF-223	ENST00000533328	MROH1	Q8NDA8	1641 aa		32.46	■■■□□ 2.79
SERGEF-223	ENST00000533328	FAM135A	Q9P2D6	1515 aa		32.46	■■■□□ 2.79
SERGEF-223	ENST00000533328	SETD1B	Q9UPS6	1966 aa	Known RBP	32.45	■■■□□ 2.78
SERGEF-223	ENST00000533328	LMTK3	Q96Q04	1460 aa		32.44	■■■□□ 2.78
SERGEF-223	ENST00000533328	KDM5D	Q9BY66	1539 aa		32.41	■■■□□ 2.78
SERGEF-223	ENST00000533328	PREX1	Q8TCU6	1659 aa		32.4	■■■□□ 2.78
SERGEF-223	ENST00000533328	DEPDC5	O75140	1603 aa		32.37	■■■□□ 2.77
SERGEF-223	ENST00000533328	ROCK1	Q13464	1354 aa		32.36	■■■□□ 2.77
SERGEF-223	ENST00000533328	NPAT	Q14207	1427 aa		32.35	■■■□□ 2.77
SERGEF-223	ENST00000533328	WASHC2C	Q9Y4E1	1318 aa		32.34	■■■□□ 2.77
SERGEF-223	ENST00000533328	ABCC3	O15438	1527 aa		32.34	■■■□□ 2.77
SERGEF-223	ENST00000533328	PRDM15	P57071	1507 aa	Predicted RBP	32.34	■■■□□ 2.77
SERGEF-223	ENST00000533328	ZC3H13	Q5T200	1668 aa	Known RBP	32.34	■■■□□ 2.77
SERGEF-223	ENST00000533328	CEP152	O94986	1710 aa		32.31	■■■□□ 2.76
SERGEF-223	ENST00000533328	ITGAE	P38570	1179 aa		32.3	■■■□□ 2.76
SERGEF-223	ENST00000533328	ANKRD50	Q9ULJ7	1429 aa		32.29	■■■□□ 2.76
SERGEF-223	ENST00000533328	PZP	P20742	1482 aa		32.27	■■■□□ 2.76
SERGEF-223	ENST00000533328	UHRF1BP1	Q6BDS2	1440 aa		32.26	■■■□□ 2.75
SERGEF-223	ENST00000533328	VWDE	Q8N2E2	1590 aa		32.25	■■■□□ 2.75
SERGEF-223	ENST00000533328	CAMSAP1	Q5T5Y3	1602 aa		32.24	■■■□□ 2.75
SERGEF-223	ENST00000533328	HSPA2	P54652	639 aa		32.23	■■■□□ 2.75
SERGEF-223	ENST00000533328	FBXO31	Q5XUX0	539 aa	Predicted RBP	32.21	■■■□□ 2.75
SERGEF-223	ENST00000533328	MYO3A	Q8NEV4	1616 aa		32.19	■■■□□ 2.74
SERGEF-223	ENST00000533328	GRWD1	Q9BQ67	446 aa	Known RBP eCLIP	32.19	■■■□□ 2.74
SERGEF-223	ENST00000533328	LMTK2	Q8IWU2	1503 aa		32.18	■■■□□ 2.74
SERGEF-223	ENST00000533328	UNC13B	O14795	1591 aa		32.16	■■■□□ 2.74
SERGEF-223	ENST00000533328	KANK1	Q14678	1352 aa		32.16	■■■□□ 2.74
SERGEF-223	ENST00000533328	ZNF142	P52746	1687 aa	Predicted RBP	32.15	■■■□□ 2.74
SERGEF-223	ENST00000533328	ARHGAP31	Q2M1Z3	1444 aa		32.15	■■■□□ 2.74
SERGEF-223	ENST00000533328	CFAP65	Q6ZU64	1925 aa	Known RBP	32.14	■■■□□ 2.74
SERGEF-223	ENST00000533328	SPATA31D1	Q6ZQQ2	1576 aa		32.13	■■■□□ 2.73
SERGEF-223	ENST00000533328	TNR	Q92752	1358 aa		32.12	■■■□□ 2.73
SERGEF-223	ENST00000533328	CEP170B	Q9Y4F5	1589 aa	Predicted RBP	32.11	■■■□□ 2.73
SERGEF-223	ENST00000533328	ERVK-7	P63135	1459 aa		32.1	■■■□□ 2.73
SERGEF-223	ENST00000533328	NAIP	Q13075	1403 aa		32.09	■■■□□ 2.73
SERGEF-223	ENST00000533328	GCC2	Q8IWJ2	1684 aa		32.08	■■■□□ 2.73
SERGEF-223	ENST00000533328	STRC	Q7RTU9	1775 aa		32.08	■■■□□ 2.73
SERGEF-223	ENST00000533328	EFCAB6	Q5THR3	1501 aa		32.05	■■■□□ 2.72
SERGEF-223	ENST00000533328	A2ML1	A8K2U0	1454 aa		32.05	■■■□□ 2.72
SERGEF-223	ENST00000533328	IQGAP3	Q86VI3	1631 aa		32.03	■■■□□ 2.72
SERGEF-223	ENST00000533328	TET3	O43151	1660 aa		32.02	■■■□□ 2.72
SERGEF-223	ENST00000533328	HFM1	A2PYH4	1435 aa		32.02	■■■□□ 2.72
SERGEF-223	ENST00000533328	NLRP1	Q9C000	1473 aa		32.02	■■■□□ 2.72
SERGEF-223	ENST00000533328	NUP155	O75694	1391 aa		31.94	■■■□□ 2.7
SERGEF-223	ENST00000533328	NOS1	P29475	1434 aa		31.94	■■■□□ 2.7
SERGEF-223	ENST00000533328	RPRD2	Q5VT52	1461 aa	Known RBP	31.94	■■■□□ 2.7
SERGEF-223	ENST00000533328	PLA2R1	Q13018	1463 aa		31.93	■■■□□ 2.7
SERGEF-223	ENST00000533328		E9PCH4	1651 aa		31.92	■■■□□ 2.7
SERGEF-223	ENST00000533328	SYNM	O15061	1565 aa		31.92	■■■□□ 2.7
SERGEF-223	ENST00000533328	UGGT1	Q9NYU2	1555 aa		31.9	■■■□□ 2.7
SERGEF-223	ENST00000533328	UBR1	Q8IWV7	1749 aa		31.88	■■■□□ 2.69
SERGEF-223	ENST00000533328	PIK3C2B	O00750	1634 aa		31.85	■■■□□ 2.69
SERGEF-223	ENST00000533328	PTPRT	O14522	1441 aa		31.84	■■■□□ 2.69
SERGEF-223	ENST00000533328	THEMIS	Q8N1K5	641 aa	Predicted RBP	31.84	■■■□□ 2.69
SERGEF-223	ENST00000533328	NCKAP5L	Q9HCH0	1330 aa		31.83	■■■□□ 2.69
SERGEF-223	ENST00000533328	DMRT2	Q9Y5R5	561 aa		31.83	■■■□□ 2.69
SERGEF-223	ENST00000533328	IDI1	Q13907	227 aa		31.81	■■■□□ 2.68
SERGEF-223	ENST00000533328	PKD2	Q13563	968 aa		31.8	■■■□□ 2.68
SERGEF-223	ENST00000533328	POLR1A	O95602	1720 aa	Predicted RBP	31.8	■■■□□ 2.68
SERGEF-223	ENST00000533328	KDM5A	P29375	1690 aa	Known RBP	31.8	■■■□□ 2.68
SERGEF-223	ENST00000533328	NEURL4	Q96JN8	1562 aa		31.77	■■■□□ 2.68
SERGEF-223	ENST00000533328	SLC52A1	Q9NWF4	448 aa		31.76	■■■□□ 2.67
SERGEF-223	ENST00000533328	ARHGAP23	Q9P227	1491 aa		31.73	■■■□□ 2.67
SERGEF-223	ENST00000533328	SLIT1	O75093	1534 aa		31.72	■■■□□ 2.67
SERGEF-223	ENST00000533328	SETD5	Q9C0A6	1442 aa		31.72	■■■□□ 2.67
SERGEF-223	ENST00000533328	TRIM52	Q96A61	297 aa		31.71	■■■□□ 2.67
SERGEF-223	ENST00000533328	SPHKAP	Q2M3C7	1700 aa		31.71	■■■□□ 2.67
SERGEF-223	ENST00000533328	ADGRB3	O60242	1522 aa		31.7	■■■□□ 2.67
SERGEF-223	ENST00000533328	ANKLE2	Q86XL3	938 aa		31.7	■■■□□ 2.67
SERGEF-223	ENST00000533328	MED14	O60244	1454 aa		31.69	■■■□□ 2.66
SERGEF-223	ENST00000533328	MYO5B	Q9ULV0	1848 aa		31.68	■■■□□ 2.66
SERGEF-223	ENST00000533328	TMEM131L	A2VDJ0	1609 aa		31.67	■■■□□ 2.66
SERGEF-223	ENST00000533328	TMEM2	Q9UHN6	1383 aa		31.65	■■■□□ 2.66
SERGEF-223	ENST00000533328	LTK	P29376	864 aa		31.63	■■■□□ 2.65
SERGEF-223	ENST00000533328	STAG3	Q9UJ98	1225 aa		31.63	■■■□□ 2.65
SERGEF-223	ENST00000533328	SLC4A1AP	Q9BWU0	796 aa	Known RBP	31.62	■■■□□ 2.65
SERGEF-223	ENST00000533328	SCAF11	Q99590	1463 aa	Known RBP	31.6	■■■□□ 2.65
SERGEF-223	ENST00000533328	NPHP4	O75161	1426 aa	Predicted RBP	31.6	■■■□□ 2.65
SERGEF-223	ENST00000533328	RAB3GAP2	Q9H2M9	1393 aa		31.6	■■■□□ 2.65
SERGEF-223	ENST00000533328	IQGAP1	P46940	1657 aa		31.59	■■■□□ 2.65
SERGEF-223	ENST00000533328	TRPM2	O94759	1503 aa		31.59	■■■□□ 2.65
SERGEF-223	ENST00000533328	LTBP4	Q8N2S1	1624 aa		31.58	■■■□□ 2.65
SERGEF-223	ENST00000533328	ACIN1	Q9UKV3	1341 aa	Known RBP	31.57	■■■□□ 2.64
SERGEF-223	ENST00000533328	TXNDC2	Q86VQ3	553 aa		31.57	■■■□□ 2.64
SERGEF-223	ENST00000533328	MPHOSPH9	Q99550	1183 aa		31.55	■■■□□ 2.64
SERGEF-223	ENST00000533328	CLTCL1	P53675	1640 aa		31.55	■■■□□ 2.64
SERGEF-223	ENST00000533328	ZFYVE9	O95405	1425 aa		31.53	■■■□□ 2.64
SERGEF-223	ENST00000533328	EID1	Q9Y6B2	187 aa		31.52	■■■□□ 2.64
SERGEF-223	ENST00000533328	ZNF335	Q9H4Z2	1342 aa	Predicted RBP	31.5	■■■□□ 2.63
SERGEF-223	ENST00000533328	HRC	P23327	699 aa		31.49	■■■□□ 2.63
SERGEF-223	ENST00000533328	CERK	Q8TCT0	537 aa		31.49	■■■□□ 2.63
SERGEF-223	ENST00000533328	CHGA	P10645	457 aa	Known RBP	31.48	■■■□□ 2.63
SERGEF-223	ENST00000533328	FOXD1	Q16676	465 aa		31.48	■■■□□ 2.63

Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms