RNA–Protein interactions for RNA: ENST00000533187.5

RELA-221, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 3

Gene RELA, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-221ENST00000533187 VWDEQ8N2E2 1590 aa29.77■■■□□ 2.36
RELA-221ENST00000533187 POLR1AO95602 1720 aaPredicted RBP29.77■■■□□ 2.36
RELA-221ENST00000533187 CCNB3Q8WWL7 1395 aa29.77■■■□□ 2.36
RELA-221ENST00000533187 ADGBQ8N7X0 1667 aa29.76■■■□□ 2.35
RELA-221ENST00000533187 ZNF644Q9H582 1327 aaPredicted RBP29.74■■■□□ 2.35
RELA-221ENST00000533187 ANKLE2Q86XL3 938 aa29.73■■■□□ 2.35
RELA-221ENST00000533187 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29.73■■■□□ 2.35
RELA-221ENST00000533187 DHX29Q7Z478 1369 aaKnown RBP29.72■■■□□ 2.35
RELA-221ENST00000533187 MBD5Q9P267 1494 aa29.72■■■□□ 2.35
RELA-221ENST00000533187 PZPP20742 1482 aa29.71■■■□□ 2.35
RELA-221ENST00000533187 RTEL1-TNFRSF6BF6WH68 1400 aa29.69■■■□□ 2.34
RELA-221ENST00000533187 MED14O60244 1454 aa29.68■■■□□ 2.34
RELA-221ENST00000533187 NPHP4O75161 1426 aaPredicted RBP29.67■■■□□ 2.34
RELA-221ENST00000533187 THEMISQ8N1K5 641 aaPredicted RBP29.66■■■□□ 2.34
RELA-221ENST00000533187 KIF3BO15066 747 aa29.65■■■□□ 2.34
RELA-221ENST00000533187 MIA2Q96PC5 1412 aa29.64■■■□□ 2.34
RELA-221ENST00000533187 KDM5DQ9BY66 1539 aa29.64■■■□□ 2.34
RELA-221ENST00000533187 SENP3Q9H4L4 574 aaPredicted RBP29.63■■■□□ 2.33
RELA-221ENST00000533187 DEPDC5O75140 1603 aa29.62■■■□□ 2.33
RELA-221ENST00000533187 NLRP1Q9C000 1473 aa29.61■■■□□ 2.33
RELA-221ENST00000533187 MTUS2Q5JR59 1369 aa29.61■■■□□ 2.33
RELA-221ENST00000533187 RGS17Q9UGC6 210 aaPredicted RBP29.6■■■□□ 2.33
RELA-221ENST00000533187 LRRC7Q96NW7 1537 aa29.6■■■□□ 2.33
RELA-221ENST00000533187 FAM135AQ9P2D6 1515 aa29.6■■■□□ 2.33
RELA-221ENST00000533187 UGGT1Q9NYU2 1555 aa29.6■■■□□ 2.33
RELA-221ENST00000533187 CHIC1Q5VXU3 224 aa29.59■■■□□ 2.33
RELA-221ENST00000533187 WASHC2CQ9Y4E1 1318 aa29.59■■■□□ 2.33
RELA-221ENST00000533187 TIAM1Q13009 1591 aa29.59■■■□□ 2.33
RELA-221ENST00000533187 STRCP1A6NGW2 1772 aa29.55■■■□□ 2.32
RELA-221ENST00000533187 IQGAP1P46940 1657 aa29.53■■■□□ 2.32
RELA-221ENST00000533187 RNF17Q9BXT8 1623 aaKnown RBP29.51■■■□□ 2.31
RELA-221ENST00000533187 CCDC141Q6ZP82 1450 aa29.48■■■□□ 2.31
RELA-221ENST00000533187 SYNMO15061 1565 aa29.47■■■□□ 2.31
RELA-221ENST00000533187 CEP162Q5TB80 1403 aa29.45■■■□□ 2.31
RELA-221ENST00000533187 EHBP1L1Q8N3D4 1523 aa29.44■■■□□ 2.3
RELA-221ENST00000533187 RSPH4AQ5TD94 716 aa29.4■■■□□ 2.3
RELA-221ENST00000533187 CAMSAP2Q08AD1 1489 aa29.4■■■□□ 2.3
RELA-221ENST00000533187 ZC3H13Q5T200 1668 aaKnown RBP29.38■■■□□ 2.29
RELA-221ENST00000533187 ABCC3O15438 1527 aa29.37■■■□□ 2.29
RELA-221ENST00000533187 POTEAQ6S8J7 498 aa29.37■■■□□ 2.29
RELA-221ENST00000533187 ERVK-7P63135 1459 aa29.36■■■□□ 2.29
RELA-221ENST00000533187 LTKP29376 864 aa29.33■■■□□ 2.29
RELA-221ENST00000533187 SCAF11Q99590 1463 aaKnown RBP29.33■■■□□ 2.29
RELA-221ENST00000533187 NCOA2Q15596 1464 aa29.32■■■□□ 2.28
RELA-221ENST00000533187 FAM135BQ49AJ0 1406 aa29.3■■■□□ 2.28
RELA-221ENST00000533187 ARHGEF5Q12774 1597 aa29.28■■■□□ 2.28
RELA-221ENST00000533187 TSPY4P0CV99 314 aa29.28■■■□□ 2.28
RELA-221ENST00000533187 TSPY10P0CW01 314 aa29.28■■■□□ 2.28
RELA-221ENST00000533187 ARHGAP23Q9P227 1491 aa29.28■■■□□ 2.28
RELA-221ENST00000533187 UBR1Q8IWV7 1749 aa29.28■■■□□ 2.28
RELA-221ENST00000533187 XIRP1Q702N8 1843 aaKnown RBP29.27■■■□□ 2.28
RELA-221ENST00000533187 TXNDC2Q86VQ3 553 aa29.26■■■□□ 2.27
RELA-221ENST00000533187 SLIT1O75093 1534 aa29.25■■■□□ 2.27
RELA-221ENST00000533187 MROH1Q8NDA8 1641 aa29.23■■■□□ 2.27
RELA-221ENST00000533187 TMEM94Q12767 1356 aa29.17■■■□□ 2.26
RELA-221ENST00000533187 EIF2AK4Q9P2K8 1649 aaKnown RBP29.16■■■□□ 2.26
RELA-221ENST00000533187 MAST1Q9Y2H9 1570 aa29.16■■■□□ 2.26
RELA-221ENST00000533187 EID1Q9Y6B2 187 aa29.14■■■□□ 2.26
RELA-221ENST00000533187 CEP152O94986 1710 aa29.13■■■□□ 2.25
RELA-221ENST00000533187 TMEM2Q9UHN6 1383 aa29.12■■■□□ 2.25
RELA-221ENST00000533187 ARHGAP31Q2M1Z3 1444 aa29.11■■■□□ 2.25
RELA-221ENST00000533187 ROBO1Q9Y6N7 1651 aa29.11■■■□□ 2.25
RELA-221ENST00000533187 MAP3K1Q13233 1512 aa29.1■■■□□ 2.25
RELA-221ENST00000533187 CFAP65Q6ZU64 1925 aaKnown RBP29.1■■■□□ 2.25
RELA-221ENST00000533187 RBM33Q96EV2 1170 aaKnown RBP29.09■■■□□ 2.25
RELA-221ENST00000533187 KCNA6P17658 529 aa29.08■■■□□ 2.25
RELA-221ENST00000533187 SETD1AO15047 1707 aaKnown RBP29.08■■■□□ 2.25
RELA-221ENST00000533187 PROSER2Q86WR7 435 aaPredicted RBP29.05■■■□□ 2.24
RELA-221ENST00000533187 PIK3C2BO00750 1634 aa29.04■■■□□ 2.24
RELA-221ENST00000533187 DUOX2Q9NRD8 1548 aa29.03■■■□□ 2.24
RELA-221ENST00000533187 SLC26A8Q96RN1 970 aa29.02■■■□□ 2.24
RELA-221ENST00000533187 LRRC9Q6ZRR7 1453 aa29.02■■■□□ 2.24
RELA-221ENST00000533187 PRDM15P57071 1507 aaPredicted RBP29.01■■■□□ 2.23
RELA-221ENST00000533187 TET3O43151 1660 aa29.01■■■□□ 2.23
RELA-221ENST00000533187 JCADQ9P266 1359 aa28.98■■■□□ 2.23
RELA-221ENST00000533187 IDI1Q13907 227 aa28.97■■■□□ 2.23
RELA-221ENST00000533187 STAG3Q9UJ98 1225 aa28.97■■■□□ 2.23
RELA-221ENST00000533187 EFCAB6Q5THR3 1501 aa28.97■■■□□ 2.23
RELA-221ENST00000533187 SLAIN2Q9P270 581 aa28.96■■■□□ 2.23
RELA-221ENST00000533187 KIF15Q9NS87 1388 aa28.95■■■□□ 2.22
RELA-221ENST00000533187 NKTRP30414 1462 aaKnown RBP28.95■■■□□ 2.22
RELA-221ENST00000533187 UPF1Q92900 1129 aaKnown RBP eCLIP28.94■■■□□ 2.22
RELA-221ENST00000533187 NWD1Q149M9 1564 aa28.93■■■□□ 2.22
RELA-221ENST00000533187 MSH6P52701 1360 aa28.93■■■□□ 2.22
RELA-221ENST00000533187 GRWD1Q9BQ67 446 aaKnown RBP eCLIP28.92■■■□□ 2.224e-9■□□□□ 9.5
RELA-221ENST00000533187 MYOM3Q5VTT5 1437 aa28.92■■■□□ 2.22
RELA-221ENST00000533187 ERBINQ96RT1 1412 aa28.92■■■□□ 2.22
RELA-221ENST00000533187 KDM5AP29375 1690 aaKnown RBP28.91■■■□□ 2.22
RELA-221ENST00000533187 PHLPP1O60346 1717 aa28.91■■■□□ 2.22
RELA-221ENST00000533187 RRP7BPQ9NSQ0 103 aa28.89■■■□□ 2.22
RELA-221ENST00000533187 LRP6O75581 1613 aa28.89■■■□□ 2.22
RELA-221ENST00000533187 KANK4Q5T7N3 995 aaPredicted RBP28.87■■■□□ 2.21
RELA-221ENST00000533187 COL16A1Q07092 1604 aaPredicted RBP28.86■■■□□ 2.21
RELA-221ENST00000533187 ABCC5O15440 1437 aa28.84■■■□□ 2.21
RELA-221ENST00000533187 TRIM52Q96A61 297 aa28.83■■■□□ 2.21
RELA-221ENST00000533187 LMTK2Q8IWU2 1503 aa28.83■■■□□ 2.21
RELA-221ENST00000533187 SPATA31A6Q5VVP1 1343 aa28.82■■■□□ 2.2
RELA-221ENST00000533187 KANK1Q14678 1352 aa28.82■■■□□ 2.2
RELA-221ENST00000533187 NOS1P29475 1434 aa28.82■■■□□ 2.2
RELA-221ENST00000533187 ADGRB3O60242 1522 aa28.81■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms