RNA–Protein interactions for RNA: ENST00000531653.5

PSMC3-211, Transcript of proteasome 26S subunit, ATPase 3, humanhuman

TSL 2

Gene PSMC3, Length 498 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC3-211ENST00000531653 HNRNPMP52272 730 aaKnown RBP eCLIP18.78■□□□□ 0.6
PSMC3-211ENST00000531653 LRRC7Q96NW7 1537 aa18.78■□□□□ 0.6
PSMC3-211ENST00000531653 FAM135AQ9P2D6 1515 aa18.77■□□□□ 0.6
PSMC3-211ENST00000531653 TNRQ92752 1358 aa18.77■□□□□ 0.6
PSMC3-211ENST00000531653 PZPP20742 1482 aa18.77■□□□□ 0.59
PSMC3-211ENST00000531653 SYNMO15061 1565 aa18.76■□□□□ 0.59
PSMC3-211ENST00000531653 NPHP4O75161 1426 aaPredicted RBP18.74■□□□□ 0.59
PSMC3-211ENST00000531653 IQGAP1P46940 1657 aa18.74■□□□□ 0.59
PSMC3-211ENST00000531653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.74■□□□□ 0.59
PSMC3-211ENST00000531653 ANKLE2Q86XL3 938 aa18.74■□□□□ 0.59
PSMC3-211ENST00000531653 ZNF777Q9ULD5 760 aaPredicted RBP18.73■□□□□ 0.59
PSMC3-211ENST00000531653 NLRP1Q9C000 1473 aa18.72■□□□□ 0.59
PSMC3-211ENST00000531653 FBXO31Q5XUX0 539 aaPredicted RBP18.72■□□□□ 0.59
PSMC3-211ENST00000531653 UBTFP17480 764 aaKnown RBP18.71■□□□□ 0.59
PSMC3-211ENST00000531653 KDM5DQ9BY66 1539 aa18.7■□□□□ 0.58
PSMC3-211ENST00000531653 RTEL1-TNFRSF6BF6WH68 1400 aa18.7■□□□□ 0.58
PSMC3-211ENST00000531653 UGGT1Q9NYU2 1555 aa18.7■□□□□ 0.58
PSMC3-211ENST00000531653 MIA2Q96PC5 1412 aa18.69■□□□□ 0.58
PSMC3-211ENST00000531653 THEMISQ8N1K5 641 aaPredicted RBP18.69■□□□□ 0.58
PSMC3-211ENST00000531653 FYCO1Q9BQS8 1478 aa18.69■□□□□ 0.58
PSMC3-211ENST00000531653 MBD5Q9P267 1494 aa18.69■□□□□ 0.58
PSMC3-211ENST00000531653 ZC3H13Q5T200 1668 aaKnown RBP18.69■□□□□ 0.58
PSMC3-211ENST00000531653 DHX29Q7Z478 1369 aaKnown RBP18.68■□□□□ 0.58
PSMC3-211ENST00000531653 XIRP1Q702N8 1843 aaKnown RBP18.67■□□□□ 0.58
PSMC3-211ENST00000531653 POTEAQ6S8J7 498 aa18.66■□□□□ 0.58
PSMC3-211ENST00000531653 CFDP1Q9UEE9 299 aaPredicted RBP18.65■□□□□ 0.58
PSMC3-211ENST00000531653 FAM135BQ49AJ0 1406 aa18.6■□□□□ 0.57
PSMC3-211ENST00000531653 CCNB3Q8WWL7 1395 aa18.6■□□□□ 0.57
PSMC3-211ENST00000531653 TIAM1Q13009 1591 aa18.59■□□□□ 0.57
PSMC3-211ENST00000531653 SETD1AO15047 1707 aaKnown RBP18.58■□□□□ 0.57
PSMC3-211ENST00000531653 SENP3Q9H4L4 574 aaPredicted RBP18.58■□□□□ 0.56
PSMC3-211ENST00000531653 ZNF644Q9H582 1327 aaPredicted RBP18.57■□□□□ 0.56
PSMC3-211ENST00000531653 KIF3BO15066 747 aa18.57■□□□□ 0.56
PSMC3-211ENST00000531653 EHMT2Q96KQ7 1210 aa18.56■□□□□ 0.56
PSMC3-211ENST00000531653 WASHC2CQ9Y4E1 1318 aa18.55■□□□□ 0.56
PSMC3-211ENST00000531653 UBR1Q8IWV7 1749 aa18.55■□□□□ 0.56
PSMC3-211ENST00000531653 ARHGAP23Q9P227 1491 aa18.53■□□□□ 0.56
PSMC3-211ENST00000531653 SLIT1O75093 1534 aa18.52■□□□□ 0.56
PSMC3-211ENST00000531653 ERVK-7P63135 1459 aa18.52■□□□□ 0.55
PSMC3-211ENST00000531653 NCOA2Q15596 1464 aa18.52■□□□□ 0.55
PSMC3-211ENST00000531653 SCAF11Q99590 1463 aaKnown RBP18.52■□□□□ 0.55
PSMC3-211ENST00000531653 ABCC3O15438 1527 aa18.51■□□□□ 0.55
PSMC3-211ENST00000531653 CCDC141Q6ZP82 1450 aa18.51■□□□□ 0.55
PSMC3-211ENST00000531653 ROBO1Q9Y6N7 1651 aa18.5■□□□□ 0.55
PSMC3-211ENST00000531653 MTUS2Q5JR59 1369 aa18.46■□□□□ 0.55
PSMC3-211ENST00000531653 MAP3K1Q13233 1512 aa18.46■□□□□ 0.55
PSMC3-211ENST00000531653 LTKP29376 864 aa18.46■□□□□ 0.55
PSMC3-211ENST00000531653 MROH1Q8NDA8 1641 aa18.45■□□□□ 0.54
PSMC3-211ENST00000531653 CEP162Q5TB80 1403 aa18.45■□□□□ 0.54
PSMC3-211ENST00000531653 CAMSAP2Q08AD1 1489 aa18.45■□□□□ 0.54
PSMC3-211ENST00000531653 EHBP1L1Q8N3D4 1523 aa18.44■□□□□ 0.54
PSMC3-211ENST00000531653 RSPH4AQ5TD94 716 aa18.44■□□□□ 0.54
PSMC3-211ENST00000531653 ARHGEF5Q12774 1597 aa18.43■□□□□ 0.54
PSMC3-211ENST00000531653 UPF1Q92900 1129 aaKnown RBP eCLIP18.43■□□□□ 0.54
PSMC3-211ENST00000531653 LRRC9Q6ZRR7 1453 aa18.42■□□□□ 0.54
PSMC3-211ENST00000531653 TMEM94Q12767 1356 aa18.42■□□□□ 0.54
PSMC3-211ENST00000531653 EIF2AK4Q9P2K8 1649 aaKnown RBP18.41■□□□□ 0.54
PSMC3-211ENST00000531653 CFAP65Q6ZU64 1925 aaKnown RBP18.4■□□□□ 0.54
PSMC3-211ENST00000531653 CEP152O94986 1710 aa18.38■□□□□ 0.53
PSMC3-211ENST00000531653 TXNDC2Q86VQ3 553 aa18.38■□□□□ 0.53
PSMC3-211ENST00000531653 MAST1Q9Y2H9 1570 aa18.38■□□□□ 0.53
PSMC3-211ENST00000531653 TET3O43151 1660 aa18.38■□□□□ 0.53
PSMC3-211ENST00000531653 JCADQ9P266 1359 aa18.37■□□□□ 0.53
PSMC3-211ENST00000531653 NWD1Q149M9 1564 aa18.37■□□□□ 0.53
PSMC3-211ENST00000531653 KDM5AP29375 1690 aaKnown RBP18.37■□□□□ 0.53
PSMC3-211ENST00000531653 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
PSMC3-211ENST00000531653 PRDM15P57071 1507 aaPredicted RBP18.36■□□□□ 0.53
PSMC3-211ENST00000531653 COL16A1Q07092 1604 aaPredicted RBP18.36■□□□□ 0.53
PSMC3-211ENST00000531653 ARHGAP31Q2M1Z3 1444 aa18.36■□□□□ 0.53
PSMC3-211ENST00000531653 LRP6O75581 1613 aa18.34■□□□□ 0.53
PSMC3-211ENST00000531653 NKTRP30414 1462 aaKnown RBP18.34■□□□□ 0.53
PSMC3-211ENST00000531653 TMEM2Q9UHN6 1383 aa18.34■□□□□ 0.53
PSMC3-211ENST00000531653 KCNA6P17658 529 aa18.34■□□□□ 0.53
PSMC3-211ENST00000531653 PIK3C2BO00750 1634 aa18.34■□□□□ 0.53
PSMC3-211ENST00000531653 SRCAPQ6ZRS2 3230 aa18.34■□□□□ 0.53
PSMC3-211ENST00000531653 EID1Q9Y6B2 187 aa18.3■□□□□ 0.52
PSMC3-211ENST00000531653 CDK12Q9NYV4 1490 aaPredicted RBP18.3■□□□□ 0.52
PSMC3-211ENST00000531653 FGD6Q6ZV73 1430 aa18.3■□□□□ 0.52
PSMC3-211ENST00000531653 TSPY4P0CV99 314 aa18.28■□□□□ 0.52
PSMC3-211ENST00000531653 TSPY10P0CW01 314 aa18.28■□□□□ 0.52
PSMC3-211ENST00000531653 SPATA31A6Q5VVP1 1343 aa18.27■□□□□ 0.52
PSMC3-211ENST00000531653 ZNF772Q68DY9 489 aaPredicted RBP18.27■□□□□ 0.52
PSMC3-211ENST00000531653 PROSER2Q86WR7 435 aaPredicted RBP18.27■□□□□ 0.52
PSMC3-211ENST00000531653 SLAIN2Q9P270 581 aa18.27■□□□□ 0.52
PSMC3-211ENST00000531653 SHPRHQ149N8 1683 aa18.27■□□□□ 0.52
PSMC3-211ENST00000531653 EFCAB6Q5THR3 1501 aa18.26■□□□□ 0.51
PSMC3-211ENST00000531653 MSH6P52701 1360 aa18.25■□□□□ 0.51
PSMC3-211ENST00000531653 AHDC1Q5TGY3 1603 aaPredicted RBP18.24■□□□□ 0.51
PSMC3-211ENST00000531653 RBM33Q96EV2 1170 aaKnown RBP18.24■□□□□ 0.51
PSMC3-211ENST00000531653 DUOX2Q9NRD8 1548 aa18.23■□□□□ 0.51
PSMC3-211ENST00000531653 CHD2O14647 1828 aaKnown RBP18.23■□□□□ 0.51
PSMC3-211ENST00000531653 CHIC1Q5VXU3 224 aa18.22■□□□□ 0.51
PSMC3-211ENST00000531653 TRIM52Q96A61 297 aa18.22■□□□□ 0.51
PSMC3-211ENST00000531653 SLC26A8Q96RN1 970 aa18.21■□□□□ 0.51
PSMC3-211ENST00000531653 DIP2AQ14689 1571 aa18.2■□□□□ 0.5
PSMC3-211ENST00000531653 NCOA3Q9Y6Q9 1424 aa18.19■□□□□ 0.5
PSMC3-211ENST00000531653 RXRBP28702 533 aa18.18■□□□□ 0.5
PSMC3-211ENST00000531653 IDI1Q13907 227 aa18.18■□□□□ 0.5
PSMC3-211ENST00000531653 LMTK2Q8IWU2 1503 aa18.18■□□□□ 0.5
PSMC3-211ENST00000531653 ADGRB3O60242 1522 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms