RNA–Protein interactions for RNA: ENST00000531558.1

PICALM-215, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 5

Gene PICALM, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-215ENST00000531558 PTPRKQ15262 1439 aa39.52■■■■□ 3.92
PICALM-215ENST00000531558 ERBINQ96RT1 1412 aa39.52■■■■□ 3.92
PICALM-215ENST00000531558 MROH2AA6NES4 1674 aa39.51■■■■□ 3.92
PICALM-215ENST00000531558 C3P01024 1663 aa39.5■■■■□ 3.91
PICALM-215ENST00000531558 CLTCQ00610 1675 aaKnown RBP39.5■■■■□ 3.91
PICALM-215ENST00000531558 RNF17Q9BXT8 1623 aaKnown RBP39.5■■■■□ 3.91
PICALM-215ENST00000531558 FAM135AQ9P2D6 1515 aa39.49■■■■□ 3.91
PICALM-215ENST00000531558 ZMYM3Q14202 1370 aa39.46■■■■□ 3.91
PICALM-215ENST00000531558 KDM5DQ9BY66 1539 aa39.45■■■■□ 3.91
PICALM-215ENST00000531558 MROH1Q8NDA8 1641 aa39.4■■■■□ 3.9
PICALM-215ENST00000531558 LMTK3Q96Q04 1460 aa39.39■■■■□ 3.9
PICALM-215ENST00000531558 ROCK1Q13464 1354 aa39.39■■■■□ 3.9
PICALM-215ENST00000531558 ITGAEP38570 1179 aa39.38■■■■□ 3.89
PICALM-215ENST00000531558 WASHC2CQ9Y4E1 1318 aa39.38■■■■□ 3.89
PICALM-215ENST00000531558 NPATQ14207 1427 aa39.34■■■■□ 3.89
PICALM-215ENST00000531558 PRDM15P57071 1507 aaPredicted RBP39.34■■■■□ 3.89
PICALM-215ENST00000531558 ABCC3O15438 1527 aa39.33■■■■□ 3.89
PICALM-215ENST00000531558 ANKRD50Q9ULJ7 1429 aa39.32■■■■□ 3.89
PICALM-215ENST00000531558 DEPDC5O75140 1603 aa39.31■■■■□ 3.88
PICALM-215ENST00000531558 PREX1Q8TCU6 1659 aa39.31■■■■□ 3.88
PICALM-215ENST00000531558 ZC3H13Q5T200 1668 aaKnown RBP39.3■■■■□ 3.88
PICALM-215ENST00000531558 UHRF1BP1Q6BDS2 1440 aa39.26■■■■□ 3.88
PICALM-215ENST00000531558 SETD1BQ9UPS6 1966 aaKnown RBP39.26■■■■□ 3.87
PICALM-215ENST00000531558 PZPP20742 1482 aa39.25■■■■□ 3.87
PICALM-215ENST00000531558 GRWD1Q9BQ67 446 aaKnown RBP eCLIP39.21■■■■□ 3.871e-7■□□□□ 8.4
PICALM-215ENST00000531558 KANK1Q14678 1352 aa39.2■■■■□ 3.87
PICALM-215ENST00000531558 CEP152O94986 1710 aa39.19■■■■□ 3.86
PICALM-215ENST00000531558 VWDEQ8N2E2 1590 aa39.16■■■■□ 3.86
PICALM-215ENST00000531558 CAMSAP1Q5T5Y3 1602 aa39.16■■■■□ 3.86
PICALM-215ENST00000531558 HSPA2P54652 639 aa39.15■■■■□ 3.86
PICALM-215ENST00000531558 FBXO31Q5XUX0 539 aaPredicted RBP39.14■■■■□ 3.86
PICALM-215ENST00000531558 LMTK2Q8IWU2 1503 aa39.12■■■■□ 3.85
PICALM-215ENST00000531558 MYO3AQ8NEV4 1616 aa39.11■■■■□ 3.85
PICALM-215ENST00000531558 TNRQ92752 1358 aa39.09■■■■□ 3.85
PICALM-215ENST00000531558 UNC13BO14795 1591 aa39.08■■■■□ 3.85
PICALM-215ENST00000531558 ARHGAP31Q2M1Z3 1444 aa39.08■■■■□ 3.85
PICALM-215ENST00000531558 SPATA31D1Q6ZQQ2 1576 aa39.04■■■■□ 3.84
PICALM-215ENST00000531558 NAIPQ13075 1403 aa39.04■■■■□ 3.84
PICALM-215ENST00000531558 ERVK-7P63135 1459 aa39.04■■■■□ 3.84
PICALM-215ENST00000531558 ZNF142P52746 1687 aaPredicted RBP39.03■■■■□ 3.84
PICALM-215ENST00000531558 CEP170BQ9Y4F5 1589 aaPredicted RBP39.02■■■■□ 3.84
PICALM-215ENST00000531558 HFM1A2PYH4 1435 aa39■■■■□ 3.83
PICALM-215ENST00000531558 GCC2Q8IWJ2 1684 aa39■■■■□ 3.83
PICALM-215ENST00000531558 EFCAB6Q5THR3 1501 aa38.99■■■■□ 3.83
PICALM-215ENST00000531558 A2ML1A8K2U0 1454 aa38.98■■■■□ 3.83
PICALM-215ENST00000531558 NLRP1Q9C000 1473 aa38.95■■■■□ 3.83
PICALM-215ENST00000531558 IQGAP3Q86VI3 1631 aa38.92■■■■□ 3.82
PICALM-215ENST00000531558 TET3O43151 1660 aa38.91■■■■□ 3.82
PICALM-215ENST00000531558 NUP155O75694 1391 aa38.91■■■■□ 3.82
PICALM-215ENST00000531558 RPRD2Q5VT52 1461 aaKnown RBP38.87■■■■□ 3.81
PICALM-215ENST00000531558 CFAP65Q6ZU64 1925 aaKnown RBP38.85■■■■□ 3.81
PICALM-215ENST00000531558 STRCQ7RTU9 1775 aa38.82■■■■□ 3.81
PICALM-215ENST00000531558 NOS1P29475 1434 aa38.82■■■■□ 3.81
PICALM-215ENST00000531558 PLA2R1Q13018 1463 aa38.82■■■■□ 3.81
PICALM-215ENST00000531558 UGGT1Q9NYU2 1555 aa38.79■■■■□ 3.8
PICALM-215ENST00000531558 SYNMO15061 1565 aa38.77■■■■□ 3.8
PICALM-215ENST00000531558 E9PCH4 1651 aa38.74■■■■□ 3.79
PICALM-215ENST00000531558 THEMISQ8N1K5 641 aaPredicted RBP38.72■■■■□ 3.79
PICALM-215ENST00000531558 DMRT2Q9Y5R5 561 aa38.71■■■■□ 3.79
PICALM-215ENST00000531558 PKD2Q13563 968 aa38.68■■■■□ 3.78
PICALM-215ENST00000531558 NCKAP5LQ9HCH0 1330 aa38.67■■■■□ 3.78
PICALM-215ENST00000531558 UBR1Q8IWV7 1749 aa38.67■■■■□ 3.78
PICALM-215ENST00000531558 PTPRTO14522 1441 aa38.67■■■■□ 3.78
PICALM-215ENST00000531558 PIK3C2BO00750 1634 aa38.67■■■■□ 3.78
PICALM-215ENST00000531558 TRIM52Q96A61 297 aa38.66■■■■□ 3.78
PICALM-215ENST00000531558 IDI1Q13907 227 aa38.65■■■■□ 3.78
PICALM-215ENST00000531558 SLC52A1Q9NWF4 448 aa38.65■■■■□ 3.78
PICALM-215ENST00000531558 SETD5Q9C0A6 1442 aa38.63■■■■□ 3.77
PICALM-215ENST00000531558 KDM5AP29375 1690 aaKnown RBP38.58■■■■□ 3.77
PICALM-215ENST00000531558 ANKLE2Q86XL3 938 aa38.57■■■■□ 3.76
PICALM-215ENST00000531558 ADGRB3O60242 1522 aa38.57■■■■□ 3.76
PICALM-215ENST00000531558 POLR1AO95602 1720 aaPredicted RBP38.56■■■■□ 3.76
PICALM-215ENST00000531558 STAG3Q9UJ98 1225 aa38.56■■■■□ 3.76
PICALM-215ENST00000531558 NEURL4Q96JN8 1562 aa38.56■■■■□ 3.76
PICALM-215ENST00000531558 ARHGAP23Q9P227 1491 aa38.54■■■■□ 3.76
PICALM-215ENST00000531558 SLIT1O75093 1534 aa38.53■■■■□ 3.76
PICALM-215ENST00000531558 SLC4A1APQ9BWU0 796 aaKnown RBP38.53■■■■□ 3.76
PICALM-215ENST00000531558 SPHKAPQ2M3C7 1700 aa38.5■■■■□ 3.75
PICALM-215ENST00000531558 RAB3GAP2Q9H2M9 1393 aa38.5■■■■□ 3.75
PICALM-215ENST00000531558 ACIN1Q9UKV3 1341 aaKnown RBP38.5■■■■□ 3.75
PICALM-215ENST00000531558 TMEM2Q9UHN6 1383 aa38.49■■■■□ 3.75
PICALM-215ENST00000531558 MED14O60244 1454 aa38.48■■■■□ 3.75
PICALM-215ENST00000531558 SCAF11Q99590 1463 aaKnown RBP38.46■■■■□ 3.75
PICALM-215ENST00000531558 NPHP4O75161 1426 aaPredicted RBP38.45■■■■□ 3.75
PICALM-215ENST00000531558 TRPM2O94759 1503 aa38.44■■■■□ 3.74
PICALM-215ENST00000531558 TMEM131LA2VDJ0 1609 aa38.44■■■■□ 3.74
PICALM-215ENST00000531558 LTKP29376 864 aa38.41■■■■□ 3.74
PICALM-215ENST00000531558 TXNDC2Q86VQ3 553 aa38.4■■■■□ 3.74
PICALM-215ENST00000531558 EID1Q9Y6B2 187 aa38.4■■■■□ 3.74
PICALM-215ENST00000531558 MPHOSPH9Q99550 1183 aa38.39■■■■□ 3.74
PICALM-215ENST00000531558 IQGAP1P46940 1657 aa38.37■■■■□ 3.73
PICALM-215ENST00000531558 CHGAP10645 457 aaKnown RBP38.37■■■■□ 3.73
PICALM-215ENST00000531558 MYO5BQ9ULV0 1848 aa38.34■■■■□ 3.73
PICALM-215ENST00000531558 CLTCL1P53675 1640 aa38.34■■■■□ 3.73
PICALM-215ENST00000531558 ZFYVE9O95405 1425 aa38.32■■■■□ 3.73
PICALM-215ENST00000531558 HRCP23327 699 aa38.31■■■■□ 3.72
PICALM-215ENST00000531558 FOXD1Q16676 465 aa38.31■■■■□ 3.72
PICALM-215ENST00000531558 RIMS2Q9UQ26 1411 aa38.3■■■■□ 3.72
PICALM-215ENST00000531558 ZNF335Q9H4Z2 1342 aaPredicted RBP38.3■■■■□ 3.72
PICALM-215ENST00000531558 LTBP4Q8N2S1 1624 aa38.29■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms