RNA–Protein interactions for RNA: ENST00000530742.5

CLINT1-210, Transcript of clathrin interactor 1, humanhuman

TSL 5 BASIC

Gene CLINT1, Length 3,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLINT1-210ENST00000530742 RNF17Q9BXT8 1623 aaKnown RBP17.46■□□□□ 0.39
CLINT1-210ENST00000530742 RTEL1-TNFRSF6BF6WH68 1400 aa17.45■□□□□ 0.38
CLINT1-210ENST00000530742 PLA2R1Q13018 1463 aa17.45■□□□□ 0.38
CLINT1-210ENST00000530742 ROCK2O75116 1388 aaKnown RBP17.44■□□□□ 0.38
CLINT1-210ENST00000530742 PRKRIP1Q9H875 184 aaPredicted RBP17.44■□□□□ 0.38
CLINT1-210ENST00000530742 ZNF777Q9ULD5 760 aaPredicted RBP17.44■□□□□ 0.38
CLINT1-210ENST00000530742 GPRASP1Q5JY77 1395 aa17.44■□□□□ 0.38
CLINT1-210ENST00000530742 USP47Q96K76 1375 aa17.44■□□□□ 0.38
CLINT1-210ENST00000530742 PRDM15P57071 1507 aaPredicted RBP17.42■□□□□ 0.38
CLINT1-210ENST00000530742 WDR7Q9Y4E6 1490 aa17.42■□□□□ 0.38
CLINT1-210ENST00000530742 VWDEQ8N2E2 1590 aa17.42■□□□□ 0.38
CLINT1-210ENST00000530742 INO80Q9ULG1 1556 aaPredicted RBP17.41■□□□□ 0.38
CLINT1-210ENST00000530742 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
CLINT1-210ENST00000530742 PRAG1Q86YV5 1406 aa17.41■□□□□ 0.38
CLINT1-210ENST00000530742 CEP152O94986 1710 aa17.4■□□□□ 0.38
CLINT1-210ENST00000530742 ZFYVE16Q7Z3T8 1539 aa17.4■□□□□ 0.38
CLINT1-210ENST00000530742 KTN1Q86UP2 1357 aaKnown RBP17.39■□□□□ 0.37
CLINT1-210ENST00000530742 TET3O43151 1660 aa17.36■□□□□ 0.37
CLINT1-210ENST00000530742 SPHKAPQ2M3C7 1700 aa17.36■□□□□ 0.37
CLINT1-210ENST00000530742 A2MP01023 1474 aa17.36■□□□□ 0.37
CLINT1-210ENST00000530742 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
CLINT1-210ENST00000530742 ERICH6BQ5W0A0 696 aa17.35■□□□□ 0.37
CLINT1-210ENST00000530742 TRPM2O94759 1503 aa17.35■□□□□ 0.37
CLINT1-210ENST00000530742 CCDC144AA2RUR9 1427 aa17.33■□□□□ 0.36
CLINT1-210ENST00000530742 IQGAP1P46940 1657 aa17.33■□□□□ 0.36
CLINT1-210ENST00000530742 PTPRTO14522 1441 aa17.32■□□□□ 0.36
CLINT1-210ENST00000530742 ZBED9Q6R2W3 1325 aa17.32■□□□□ 0.36
CLINT1-210ENST00000530742 MADDQ8WXG6 1647 aa17.31■□□□□ 0.36
CLINT1-210ENST00000530742 ZMYM4Q5VZL5 1548 aa17.31■□□□□ 0.36
CLINT1-210ENST00000530742 MROH1Q8NDA8 1641 aa17.29■□□□□ 0.36
CLINT1-210ENST00000530742 TRAPPC8Q9Y2L5 1435 aa17.29■□□□□ 0.36
CLINT1-210ENST00000530742 COL17A1Q9UMD9 1497 aaPredicted RBP17.28■□□□□ 0.36
CLINT1-210ENST00000530742 INSRP06213 1382 aa17.27■□□□□ 0.36
CLINT1-210ENST00000530742 EFCAB2Q5VUJ9 269 aa17.27■□□□□ 0.36
CLINT1-210ENST00000530742 IFT172Q9UG01 1749 aa17.27■□□□□ 0.36
CLINT1-210ENST00000530742 CCDC184Q52MB2 194 aa17.27■□□□□ 0.35
CLINT1-210ENST00000530742 ATP7AQ04656 1500 aa17.26■□□□□ 0.35
CLINT1-210ENST00000530742 CFAP74Q9C0B2 1584 aa17.25■□□□□ 0.35
CLINT1-210ENST00000530742 LMTK2Q8IWU2 1503 aa17.25■□□□□ 0.35
CLINT1-210ENST00000530742 FKBP8Q14318 412 aa17.25■□□□□ 0.35
CLINT1-210ENST00000530742 STAC3Q96MF2 364 aa17.24■□□□□ 0.35
CLINT1-210ENST00000530742 LRPPRCP42704 1394 aaKnown RBP17.24■□□□□ 0.35
CLINT1-210ENST00000530742 TSHZ2Q9NRE2 1034 aa17.24■□□□□ 0.35
CLINT1-210ENST00000530742 CLTCL1P53675 1640 aa17.23■□□□□ 0.35
CLINT1-210ENST00000530742 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
CLINT1-210ENST00000530742 SCAPERQ9BY12 1400 aa17.23■□□□□ 0.35
CLINT1-210ENST00000530742 SMG6Q86US8 1419 aaKnown RBP17.22■□□□□ 0.35
CLINT1-210ENST00000530742 CARD11Q9BXL7 1154 aa17.22■□□□□ 0.35
CLINT1-210ENST00000530742 NEFLP07196 543 aa17.21■□□□□ 0.35
CLINT1-210ENST00000530742 KIDINS220Q9ULH0 1771 aa17.21■□□□□ 0.35
CLINT1-210ENST00000530742 BRD4O60885 1362 aaPredicted RBP17.21■□□□□ 0.34
CLINT1-210ENST00000530742 WASHC2CQ9Y4E1 1318 aa17.21■□□□□ 0.34
CLINT1-210ENST00000530742 FANCAO15360 1455 aa17.19■□□□□ 0.34
CLINT1-210ENST00000530742 PARD3Q8TEW0 1356 aa17.18■□□□□ 0.34
CLINT1-210ENST00000530742 DCAF11Q8TEB1 546 aa17.18■□□□□ 0.34
CLINT1-210ENST00000530742 MRS2Q9HD23 443 aa17.18■□□□□ 0.34
CLINT1-210ENST00000530742 RNF123Q5XPI4 1314 aa17.18■□□□□ 0.34
CLINT1-210ENST00000530742 RALBP1Q15311 655 aa17.17■□□□□ 0.34
CLINT1-210ENST00000530742 MYO3AQ8NEV4 1616 aa17.16■□□□□ 0.34
CLINT1-210ENST00000530742 MYOM2P54296 1465 aa17.16■□□□□ 0.34
CLINT1-210ENST00000530742 EFCAB6Q5THR3 1501 aa17.16■□□□□ 0.34
CLINT1-210ENST00000530742 ST20-MTHFSA0A0A6YYL1 179 aa17.16■□□□□ 0.34
CLINT1-210ENST00000530742 KIF1BO60333 1816 aa17.15■□□□□ 0.34
CLINT1-210ENST00000530742 SYNMO15061 1565 aa17.15■□□□□ 0.34
CLINT1-210ENST00000530742 PNISRQ8TF01 805 aaKnown RBP17.14■□□□□ 0.33
CLINT1-210ENST00000530742 TESK2Q96S53 571 aa17.14■□□□□ 0.33
CLINT1-210ENST00000530742 NRXN1Q9ULB1 1477 aa17.14■□□□□ 0.33
CLINT1-210ENST00000530742 MYOM1P52179 1685 aa17.14■□□□□ 0.33
CLINT1-210ENST00000530742 MAP3K4Q9Y6R4 1608 aa17.13■□□□□ 0.33
CLINT1-210ENST00000530742 MYBBP1AQ9BQG0 1328 aaKnown RBP17.12■□□□□ 0.33
CLINT1-210ENST00000530742 MYT1Q01538 1121 aa17.12■□□□□ 0.33
CLINT1-210ENST00000530742 PER1O15534 1290 aaPredicted RBP17.12■□□□□ 0.33
CLINT1-210ENST00000530742 SPAG9O60271 1321 aaKnown RBP17.12■□□□□ 0.33
CLINT1-210ENST00000530742 ADGRL1O94910 1474 aa17.11■□□□□ 0.33
CLINT1-210ENST00000530742 PPRC1Q5VV67 1664 aaKnown RBP17.11■□□□□ 0.33
CLINT1-210ENST00000530742 ASXL2Q76L83 1435 aa17.11■□□□□ 0.33
CLINT1-210ENST00000530742 ZNF518AQ6AHZ1 1483 aa17.09■□□□□ 0.33
CLINT1-210ENST00000530742 SETBP1Q9Y6X0 1596 aa17.09■□□□□ 0.33
CLINT1-210ENST00000530742 MLH3Q9UHC1 1453 aa17.08■□□□□ 0.33
CLINT1-210ENST00000530742 MROH2AA6NES4 1674 aa17.08■□□□□ 0.32
CLINT1-210ENST00000530742 SCAF11Q99590 1463 aaKnown RBP17.08■□□□□ 0.32
CLINT1-210ENST00000530742 FRMPD1Q5SYB0 1578 aa17.07■□□□□ 0.32
CLINT1-210ENST00000530742 ABCA6Q8N139 1617 aa17.07■□□□□ 0.32
CLINT1-210ENST00000530742 ADGRB3O60242 1522 aa17.07■□□□□ 0.32
CLINT1-210ENST00000530742 ZNF326Q5BKZ1 582 aaKnown RBP17.06■□□□□ 0.32
CLINT1-210ENST00000530742 ZC3H13Q5T200 1668 aaKnown RBP17.06■□□□□ 0.32
CLINT1-210ENST00000530742 DISP3Q9P2K9 1392 aa17.06■□□□□ 0.32
CLINT1-210ENST00000530742 HECW2Q9P2P5 1572 aa17.06■□□□□ 0.32
CLINT1-210ENST00000530742 PPLO60437 1756 aa17.06■□□□□ 0.32
CLINT1-210ENST00000530742 BLMP54132 1417 aaPredicted RBP17.06■□□□□ 0.32
CLINT1-210ENST00000530742 NBPF1Q3BBV0 1214 aa17.05■□□□□ 0.32
CLINT1-210ENST00000530742 FAM9BQ8IZU0 186 aa17.05■□□□□ 0.32
CLINT1-210ENST00000530742 KDM2AQ9Y2K7 1162 aa17.05■□□□□ 0.32
CLINT1-210ENST00000530742 KDM5AP29375 1690 aaKnown RBP17.05■□□□□ 0.32
CLINT1-210ENST00000530742 PPP4R2Q9NY27 417 aa17.04■□□□□ 0.32
CLINT1-210ENST00000530742 KANK1Q14678 1352 aa17.04■□□□□ 0.32
CLINT1-210ENST00000530742 NPC1L1Q9UHC9 1359 aa17.04■□□□□ 0.32
CLINT1-210ENST00000530742 NUDCQ9Y266 331 aa17.03■□□□□ 0.32
CLINT1-210ENST00000530742 PIK3C2BO00750 1634 aa17.03■□□□□ 0.32
CLINT1-210ENST00000530742 POGZQ7Z3K3 1410 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms