RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 UNC13BO14795 1591 aa17.13■□□□□ 0.33
CAPN1-217ENST00000529133 DEPDC5O75140 1603 aa17.13■□□□□ 0.33
CAPN1-217ENST00000529133 PRDM15P57071 1507 aaPredicted RBP17.11■□□□□ 0.33
CAPN1-217ENST00000529133 MLECQ14165 292 aa17.09■□□□□ 0.33
CAPN1-217ENST00000529133 GGT6Q6P531 493 aa17.09■□□□□ 0.33
CAPN1-217ENST00000529133 VWDEQ8N2E2 1590 aa17.07■□□□□ 0.32
CAPN1-217ENST00000529133 KDM5DQ9BY66 1539 aa17.07■□□□□ 0.32
CAPN1-217ENST00000529133 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.07■□□□□ 0.322e-6■■■□□ 14.7
CAPN1-217ENST00000529133 HRCP23327 699 aa17.06■□□□□ 0.32
CAPN1-217ENST00000529133 FAM135AQ9P2D6 1515 aa17.06■□□□□ 0.32
CAPN1-217ENST00000529133 NUP155O75694 1391 aa17.05■□□□□ 0.32
CAPN1-217ENST00000529133 IQGAP3Q86VI3 1631 aa17.05■□□□□ 0.32
CAPN1-217ENST00000529133 ABCC3O15438 1527 aa17.05■□□□□ 0.32
CAPN1-217ENST00000529133 KANK1Q14678 1352 aa17.04■□□□□ 0.32
CAPN1-217ENST00000529133 ACIN1Q9UKV3 1341 aaKnown RBP17.03■□□□□ 0.32
CAPN1-217ENST00000529133 TRIM52Q96A61 297 aa17.03■□□□□ 0.32
CAPN1-217ENST00000529133 PPP6R1Q9UPN7 881 aa17.03■□□□□ 0.32
CAPN1-217ENST00000529133 PZPP20742 1482 aa17.03■□□□□ 0.32
CAPN1-217ENST00000529133 ADAMTSL3P82987 1691 aa17.03■□□□□ 0.32
CAPN1-217ENST00000529133 ZC3H13Q5T200 1668 aaKnown RBP17.03■□□□□ 0.32
CAPN1-217ENST00000529133 LMTK2Q8IWU2 1503 aa17.02■□□□□ 0.32
CAPN1-217ENST00000529133 MADDQ8WXG6 1647 aa17.02■□□□□ 0.31
CAPN1-217ENST00000529133 CEP152O94986 1710 aa17.01■□□□□ 0.31
CAPN1-217ENST00000529133 WASHC2CQ9Y4E1 1318 aa17■□□□□ 0.31
CAPN1-217ENST00000529133 CNTLNQ9NXG0 1405 aa17■□□□□ 0.31
CAPN1-217ENST00000529133 CLTCQ00610 1675 aaKnown RBP17■□□□□ 0.31
CAPN1-217ENST00000529133 FER1L4A9Z1Z3 1794 aa17■□□□□ 0.31
CAPN1-217ENST00000529133 CAMSAP1Q5T5Y3 1602 aa16.99■□□□□ 0.31
CAPN1-217ENST00000529133 TET3O43151 1660 aa16.98■□□□□ 0.31
CAPN1-217ENST00000529133 EFCAB6Q5THR3 1501 aa16.98■□□□□ 0.31
CAPN1-217ENST00000529133 ESF1Q9H501 851 aaKnown RBP16.97■□□□□ 0.31
CAPN1-217ENST00000529133 MROH2AA6NES4 1674 aa16.96■□□□□ 0.31
CAPN1-217ENST00000529133 RIMS1Q86UR5 1692 aaKnown RBP16.96■□□□□ 0.31
CAPN1-217ENST00000529133 MPHOSPH9Q99550 1183 aa16.95■□□□□ 0.3
CAPN1-217ENST00000529133 SLC4A1APQ9BWU0 796 aaKnown RBP16.95■□□□□ 0.3
CAPN1-217ENST00000529133 NPATQ14207 1427 aa16.94■□□□□ 0.3
CAPN1-217ENST00000529133 ARHGAP31Q2M1Z3 1444 aa16.94■□□□□ 0.3
CAPN1-217ENST00000529133 ZMYM3Q14202 1370 aa16.93■□□□□ 0.3
CAPN1-217ENST00000529133 KDM4FA0A1W2PPD8 638 aa16.93■□□□□ 0.3
CAPN1-217ENST00000529133 DHX57Q6P158 1386 aaKnown RBP16.92■□□□□ 0.3
CAPN1-217ENST00000529133 E9PCH4 1651 aa16.92■□□□□ 0.3
CAPN1-217ENST00000529133 RPRD2Q5VT52 1461 aaKnown RBP16.92■□□□□ 0.3
CAPN1-217ENST00000529133 PKD2Q13563 968 aa16.91■□□□□ 0.3
CAPN1-217ENST00000529133 PTPRMP28827 1452 aa16.91■□□□□ 0.3
CAPN1-217ENST00000529133 C3P01024 1663 aa16.9■□□□□ 0.3
CAPN1-217ENST00000529133 ERVK-7P63135 1459 aa16.88■□□□□ 0.29
CAPN1-217ENST00000529133 SPATA31D1Q6ZQQ2 1576 aa16.87■□□□□ 0.29
CAPN1-217ENST00000529133 CEBPAP49715 358 aaPredicted RBP16.87■□□□□ 0.29
CAPN1-217ENST00000529133 FOXD1Q16676 465 aa16.87■□□□□ 0.29
CAPN1-217ENST00000529133 NOS1P29475 1434 aa16.87■□□□□ 0.29
CAPN1-217ENST00000529133 PREX1Q8TCU6 1659 aa16.86■□□□□ 0.29
CAPN1-217ENST00000529133 FBXO31Q5XUX0 539 aaPredicted RBP16.86■□□□□ 0.29
CAPN1-217ENST00000529133 PTPRTO14522 1441 aa16.85■□□□□ 0.29
CAPN1-217ENST00000529133 PLA2R1Q13018 1463 aa16.85■□□□□ 0.29
CAPN1-217ENST00000529133 PLPPR3Q6T4P5 718 aa16.84■□□□□ 0.29
CAPN1-217ENST00000529133 SYNMO15061 1565 aa16.84■□□□□ 0.29
CAPN1-217ENST00000529133 TRPM2O94759 1503 aa16.83■□□□□ 0.28
CAPN1-217ENST00000529133 SPHKAPQ2M3C7 1700 aa16.83■□□□□ 0.28
CAPN1-217ENST00000529133 TNRQ92752 1358 aa16.82■□□□□ 0.28
CAPN1-217ENST00000529133 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
CAPN1-217ENST00000529133 UGGT1Q9NYU2 1555 aa16.8■□□□□ 0.28
CAPN1-217ENST00000529133 CLTCL1P53675 1640 aa16.78■□□□□ 0.28
CAPN1-217ENST00000529133 PIK3C2BO00750 1634 aa16.78■□□□□ 0.28
CAPN1-217ENST00000529133 MYO3AQ8NEV4 1616 aa16.77■□□□□ 0.27
CAPN1-217ENST00000529133 CCER1Q8TC90 406 aaPredicted RBP16.76■□□□□ 0.27
CAPN1-217ENST00000529133 CCDC144AA2RUR9 1427 aa16.76■□□□□ 0.27
CAPN1-217ENST00000529133 NLRP1Q9C000 1473 aa16.75■□□□□ 0.27
CAPN1-217ENST00000529133 SLC52A1Q9NWF4 448 aa16.74■□□□□ 0.27
CAPN1-217ENST00000529133 CFAP65Q6ZU64 1925 aaKnown RBP16.73■□□□□ 0.27
CAPN1-217ENST00000529133 IDI1Q13907 227 aa16.73■□□□□ 0.27
CAPN1-217ENST00000529133 CLSPNQ9HAW4 1339 aa16.72■□□□□ 0.27
CAPN1-217ENST00000529133 A2ML1A8K2U0 1454 aa16.72■□□□□ 0.27
CAPN1-217ENST00000529133 ADGRB3O60242 1522 aa16.71■□□□□ 0.27
CAPN1-217ENST00000529133 CEP170BQ9Y4F5 1589 aaPredicted RBP16.71■□□□□ 0.27
CAPN1-217ENST00000529133 UHRF1BP1Q6BDS2 1440 aa16.7■□□□□ 0.26
CAPN1-217ENST00000529133 ZNF142P52746 1687 aaPredicted RBP16.7■□□□□ 0.26
CAPN1-217ENST00000529133 SIN3AQ96ST3 1273 aa16.7■□□□□ 0.26
CAPN1-217ENST00000529133 SPATA31E1Q6ZUB1 1445 aa16.69■□□□□ 0.26
CAPN1-217ENST00000529133 TMEM131LA2VDJ0 1609 aa16.68■□□□□ 0.26
CAPN1-217ENST00000529133 KDM5AP29375 1690 aaKnown RBP16.67■□□□□ 0.26
CAPN1-217ENST00000529133 NEURL4Q96JN8 1562 aa16.67■□□□□ 0.26
CAPN1-217ENST00000529133 UBR1Q8IWV7 1749 aa16.67■□□□□ 0.26
CAPN1-217ENST00000529133 CHGAP10645 457 aaKnown RBP16.66■□□□□ 0.26
CAPN1-217ENST00000529133 NEUROD1Q13562 356 aa16.65■□□□□ 0.26
CAPN1-217ENST00000529133 LMTK3Q96Q04 1460 aa16.65■□□□□ 0.26
CAPN1-217ENST00000529133 KIF1BO60333 1816 aa16.65■□□□□ 0.26
CAPN1-217ENST00000529133 STAG3Q9UJ98 1225 aa16.64■□□□□ 0.25
CAPN1-217ENST00000529133 SETD1BQ9UPS6 1966 aaKnown RBP16.63■□□□□ 0.25
CAPN1-217ENST00000529133 MYO5BQ9ULV0 1848 aa16.61■□□□□ 0.25
CAPN1-217ENST00000529133 ARHGAP23Q9P227 1491 aa16.61■□□□□ 0.25
CAPN1-217ENST00000529133 RGL3Q3MIN7 710 aa16.6■□□□□ 0.25
CAPN1-217ENST00000529133 THEMISQ8N1K5 641 aaPredicted RBP16.6■□□□□ 0.25
CAPN1-217ENST00000529133 TMEM2Q9UHN6 1383 aa16.6■□□□□ 0.25
CAPN1-217ENST00000529133 SLIT1O75093 1534 aa16.6■□□□□ 0.25
CAPN1-217ENST00000529133 NEXMIFQ5QGS0 1516 aa16.6■□□□□ 0.25
CAPN1-217ENST00000529133 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
CAPN1-217ENST00000529133 ZFYVE9O95405 1425 aa16.59■□□□□ 0.25
CAPN1-217ENST00000529133 RIMS2Q9UQ26 1411 aa16.59■□□□□ 0.25
CAPN1-217ENST00000529133 TONSLQ96HA7 1378 aa16.58■□□□□ 0.24
CAPN1-217ENST00000529133 RPGRIP1LQ68CZ1 1315 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms