RNA–Protein interactions for RNA: ENST00000528461.5

SEC16B-208, Transcript of SEC16 homolog B, endoplasmic reticulum export factor, humanhuman

TSL 1 (best)

Gene SEC16B, Length 3,277 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16B-208ENST00000528461 KIDINS220Q9ULH0 1771 aa19.08■□□□□ 0.65
SEC16B-208ENST00000528461 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.07■□□□□ 0.645e-7■□□□□ 9.3
SEC16B-208ENST00000528461 KDM5CP41229 1560 aa19.07■□□□□ 0.64
SEC16B-208ENST00000528461 RALGAPBQ86X10 1494 aa19.07■□□□□ 0.64
SEC16B-208ENST00000528461 VWDEQ8N2E2 1590 aa19.07■□□□□ 0.64
SEC16B-208ENST00000528461 E9PCH4 1651 aa19.07■□□□□ 0.64
SEC16B-208ENST00000528461 NPM1P06748 294 aaKnown RBP eCLIP19.05■□□□□ 0.64
SEC16B-208ENST00000528461 MROH1Q8NDA8 1641 aa19.05■□□□□ 0.64
SEC16B-208ENST00000528461 BCORL1Q5H9F3 1711 aa19.05■□□□□ 0.64
SEC16B-208ENST00000528461 CD109Q6YHK3 1445 aa19.04■□□□□ 0.64
SEC16B-208ENST00000528461 CCDC7Q96M83 1385 aa19.04■□□□□ 0.64
SEC16B-208ENST00000528461 EIF2AK4Q9P2K8 1649 aaKnown RBP19.03■□□□□ 0.64
SEC16B-208ENST00000528461 CCDC144AA2RUR9 1427 aa19.03■□□□□ 0.64
SEC16B-208ENST00000528461 CFAP74Q9C0B2 1584 aa19.02■□□□□ 0.64
SEC16B-208ENST00000528461 A2MP01023 1474 aa19.01■□□□□ 0.63
SEC16B-208ENST00000528461 DHX29Q7Z478 1369 aaKnown RBP19■□□□□ 0.63
SEC16B-208ENST00000528461 ZNF518AQ6AHZ1 1483 aa19■□□□□ 0.63
SEC16B-208ENST00000528461 TRPM1Q7Z4N2 1603 aa19■□□□□ 0.63
SEC16B-208ENST00000528461 PRDM15P57071 1507 aaPredicted RBP19■□□□□ 0.63
SEC16B-208ENST00000528461 TET3O43151 1660 aa18.99■□□□□ 0.63
SEC16B-208ENST00000528461 RIMBP3CA6NJZ7 1639 aa18.99■□□□□ 0.63
SEC16B-208ENST00000528461 RIMBP3BA6NNM3 1639 aa18.99■□□□□ 0.63
SEC16B-208ENST00000528461 RIMBP3Q9UFD9 1639 aa18.99■□□□□ 0.63
SEC16B-208ENST00000528461 USP47Q96K76 1375 aa18.99■□□□□ 0.63
SEC16B-208ENST00000528461 DCAF11Q8TEB1 546 aa18.98■□□□□ 0.63
SEC16B-208ENST00000528461 POGZQ7Z3K3 1410 aa18.98■□□□□ 0.63
SEC16B-208ENST00000528461 CCER2I3L3R5 266 aa18.98■□□□□ 0.63
SEC16B-208ENST00000528461 PTPRTO14522 1441 aa18.98■□□□□ 0.63
SEC16B-208ENST00000528461 PRAG1Q86YV5 1406 aa18.98■□□□□ 0.63
SEC16B-208ENST00000528461 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
SEC16B-208ENST00000528461 CNTLNQ9NXG0 1405 aa18.97■□□□□ 0.63
SEC16B-208ENST00000528461 SPHKAPQ2M3C7 1700 aa18.97■□□□□ 0.63
SEC16B-208ENST00000528461 ZNF326Q5BKZ1 582 aaKnown RBP18.96■□□□□ 0.63
SEC16B-208ENST00000528461 GTF3C3Q9Y5Q9 886 aa18.96■□□□□ 0.63
SEC16B-208ENST00000528461 MAP3K4Q9Y6R4 1608 aa18.96■□□□□ 0.63
SEC16B-208ENST00000528461 FRMPD1Q5SYB0 1578 aa18.96■□□□□ 0.63
SEC16B-208ENST00000528461 TRPM2O94759 1503 aa18.96■□□□□ 0.63
SEC16B-208ENST00000528461 ANP32CO43423 234 aa18.96■□□□□ 0.63
SEC16B-208ENST00000528461 MLH3Q9UHC1 1453 aa18.95■□□□□ 0.62
SEC16B-208ENST00000528461 KDM2AQ9Y2K7 1162 aa18.95■□□□□ 0.62
SEC16B-208ENST00000528461 RNF17Q9BXT8 1623 aaKnown RBP18.93■□□□□ 0.62
SEC16B-208ENST00000528461 CEP152O94986 1710 aa18.93■□□□□ 0.62
SEC16B-208ENST00000528461 NEO1Q92859 1461 aa18.93■□□□□ 0.62
SEC16B-208ENST00000528461 CLTCL1P53675 1640 aa18.92■□□□□ 0.62
SEC16B-208ENST00000528461 HECW2Q9P2P5 1572 aa18.92■□□□□ 0.62
SEC16B-208ENST00000528461 GLI2P10070 1586 aa18.91■□□□□ 0.62
SEC16B-208ENST00000528461 ABCA6Q8N139 1617 aa18.91■□□□□ 0.62
SEC16B-208ENST00000528461 KIF3BO15066 747 aa18.91■□□□□ 0.62
SEC16B-208ENST00000528461 LAMC1P11047 1609 aa18.9■□□□□ 0.62
SEC16B-208ENST00000528461 GPRASP1Q5JY77 1395 aa18.9■□□□□ 0.62
SEC16B-208ENST00000528461 RGL3Q3MIN7 710 aa18.89■□□□□ 0.62
SEC16B-208ENST00000528461 CYB5RLQ6IPT4 315 aa18.89■□□□□ 0.62
SEC16B-208ENST00000528461 RICTORQ6R327 1708 aa18.89■□□□□ 0.61
SEC16B-208ENST00000528461 LMTK2Q8IWU2 1503 aa18.89■□□□□ 0.61
SEC16B-208ENST00000528461 CARD11Q9BXL7 1154 aa18.89■□□□□ 0.61
SEC16B-208ENST00000528461 PPRC1Q5VV67 1664 aaKnown RBP18.88■□□□□ 0.61
SEC16B-208ENST00000528461 EFCAB6Q5THR3 1501 aa18.88■□□□□ 0.61
SEC16B-208ENST00000528461 NBPF1Q3BBV0 1214 aa18.86■□□□□ 0.61
SEC16B-208ENST00000528461 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
SEC16B-208ENST00000528461 ROCK2O75116 1388 aaKnown RBP18.85■□□□□ 0.61
SEC16B-208ENST00000528461 KANK1Q14678 1352 aa18.85■□□□□ 0.61
SEC16B-208ENST00000528461 MADDQ8WXG6 1647 aa18.85■□□□□ 0.61
SEC16B-208ENST00000528461 ARID4BQ4LE39 1312 aaPredicted RBP18.84■□□□□ 0.61
SEC16B-208ENST00000528461 ST20-MTHFSA0A0A6YYL1 179 aa18.84■□□□□ 0.61
SEC16B-208ENST00000528461 DIP2BQ9P265 1576 aa18.83■□□□□ 0.6
SEC16B-208ENST00000528461 DIP2CQ9Y2E4 1556 aa18.83■□□□□ 0.6
SEC16B-208ENST00000528461 RAPGEF3O95398 923 aa18.82■□□□□ 0.6
SEC16B-208ENST00000528461 MYT1LQ9UL68 1186 aa18.82■□□□□ 0.6
SEC16B-208ENST00000528461 UGGT1Q9NYU2 1555 aa18.82■□□□□ 0.6
SEC16B-208ENST00000528461 PRKRIP1Q9H875 184 aaPredicted RBP18.81■□□□□ 0.6
SEC16B-208ENST00000528461 CCDC184Q52MB2 194 aa18.78■□□□□ 0.6
SEC16B-208ENST00000528461 IFT172Q9UG01 1749 aa18.78■□□□□ 0.6
SEC16B-208ENST00000528461 MROH2AA6NES4 1674 aa18.77■□□□□ 0.6
SEC16B-208ENST00000528461 ABCC3O15438 1527 aa18.76■□□□□ 0.59
SEC16B-208ENST00000528461 IQGAP1P46940 1657 aa18.76■□□□□ 0.59
SEC16B-208ENST00000528461 NPATQ14207 1427 aa18.75■□□□□ 0.59
SEC16B-208ENST00000528461 KIF1BO60333 1816 aa18.75■□□□□ 0.59
SEC16B-208ENST00000528461 TESK2Q96S53 571 aa18.75■□□□□ 0.59
SEC16B-208ENST00000528461 SIGLEC1Q9BZZ2 1709 aa18.74■□□□□ 0.59
SEC16B-208ENST00000528461 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
SEC16B-208ENST00000528461 ZMYM4Q5VZL5 1548 aa18.73■□□□□ 0.59
SEC16B-208ENST00000528461 KIAA1210Q9ULL0 1709 aa18.72■□□□□ 0.59
SEC16B-208ENST00000528461 CAMSAP1Q5T5Y3 1602 aa18.72■□□□□ 0.59
SEC16B-208ENST00000528461 STAC3Q96MF2 364 aa18.71■□□□□ 0.59
SEC16B-208ENST00000528461 COL17A1Q9UMD9 1497 aaPredicted RBP18.71■□□□□ 0.59
SEC16B-208ENST00000528461 ADGRB3O60242 1522 aa18.71■□□□□ 0.59
SEC16B-208ENST00000528461 CFAP65Q6ZU64 1925 aaKnown RBP18.7■□□□□ 0.58
SEC16B-208ENST00000528461 MYOM2P54296 1465 aa18.7■□□□□ 0.58
SEC16B-208ENST00000528461 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
SEC16B-208ENST00000528461 TSPOAP1O95153 1857 aa18.69■□□□□ 0.58
SEC16B-208ENST00000528461 NRXN1Q9ULB1 1477 aa18.69■□□□□ 0.58
SEC16B-208ENST00000528461 GGT6Q6P531 493 aa18.69■□□□□ 0.58
SEC16B-208ENST00000528461 DISP3Q9P2K9 1392 aa18.68■□□□□ 0.58
SEC16B-208ENST00000528461 PIK3C2BO00750 1634 aa18.67■□□□□ 0.58
SEC16B-208ENST00000528461 NOS1P29475 1434 aa18.67■□□□□ 0.58
SEC16B-208ENST00000528461 KIF13AQ9H1H9 1805 aa18.67■□□□□ 0.58
SEC16B-208ENST00000528461 ZC3H13Q5T200 1668 aaKnown RBP18.66■□□□□ 0.58
SEC16B-208ENST00000528461 SYNMO15061 1565 aa18.65■□□□□ 0.58
SEC16B-208ENST00000528461 POLR3GLQ9BT43 218 aa18.65■□□□□ 0.58
SEC16B-208ENST00000528461 PPLO60437 1756 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms